mRNA_P-wetherbeei_contig13339.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A836CDH6_9STRA (Lung seven transmembrane receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH6_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.260e-23 Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 10 AKGFQYSLVEDFSESRFSFSERYMFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRTGAIEFEQPPVDLCRSIHSFALGDASRT---------IGGAGTFRGKVLDHYEVKEAGLQYAMFQLCP---APQEPDVKVSGELTFKNPYGYLPGMYYGYLPFQ 483
A GF+Y LV+ + + SFSE++M+ +++GP + G SYI +D++++ + Y VL Y+ E + PPVDLC+ S T T G+V Y V+E GL YA+ Q+CP + D G++TF N YGYLPG YGYLP Q
Sbjct: 21 ADGFRYHLVDKLNGTLVSFSEQFMYGTDQGPLGFKHGLSYIAMDMNMTAAAPAAKGNYITNVLFYKNAEYEIDLPPVDLCQQPKPVYPEGFSHTQLDHFPMERSDAGNTVTGQVAAKYRVEEGGLTYAVMQVCPPRWSAVAVDATFKGDITFHNTYGYLPGSDYGYLPLQ 190
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: F0YHP6_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHP6_AURAN) HSP 1 Score: 95.9 bits (237), Expect = 3.630e-20 Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 1 LASAKGFQYSLVEDFSESRFSFSERYMFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRTGAIEFEQPPVDLC-RSIHSFALGDASRTIGGAGTFRGKVLDHYEVKEAGLQYAMFQLCPAPQEPDVKVSGELTFKNPYGYLPGMYYGYLPFQV 486
L + +++ + + + + + SFSE Y + +++GP G SY+ +DL+ + SS N+TVL + T E E V+LC R + + A R+ K+ +YEV +GLQY Q+C + +++ G +TFKNPYG+LP MY+G+LPF++
Sbjct: 11 LGAVASYKWDISDTYGQEKLSFSELYQYGTDDGPFPVTRGASYVLVDLEGQLSNPYSSA--NVTVLAF-TSPGELELGGVNLCARELPAGVETSARRSFAVDAVSSRKIRLYYEVPTSGLQYVALQVCDSWAPVLLRLEGTITFKNPYGFLPAMYFGFLPFEL 170
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: W7TKC6_9STRA (Gpr7 transmembrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKC6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.780e-19 Identity = 60/183 (32.79%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 19 FQYSLVEDFSES-RFSFSERYMFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRT-------GAIEFEQ------PPVDLC----------RSIHSFALG--DASRTIGGAGT-FRGKVLDHYEVKEAGLQYAMFQLCPA-PQEPDVKVSGELTFKNPYGYLPGMYYGYLPFQ 483
F+Y + E ++E+ ++S++E YM+ S +GP G++ +H++L + + T D N++VL Y GA P DLC R++H+ +A+ G A T + +V Y+V E+G+Q +FQ+CP +V ++GEL+F+NPYG+LPG +YGYLPF+
Sbjct: 22 FKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAXXXXXXXVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFE 204
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A4D9CUW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUW6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.210e-19 Identity = 61/185 (32.97%), Postives = 102/185 (55.14%), Query Frame = 1
Query: 19 FQYSLVEDFSES-RFSFSERYMFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYR---TG----------------------AIEFEQPPVDLCRSIHSFALG--DASRTIGGAGT-FRGKVLDHYEVKEAGLQYAMFQLCPA-PQEPDVKVSGELTFKNPYGYLPGMYYGYLPFQ 483
F+Y + E ++E+ ++S++E YM+ S +GP G++ +H++L + + T D N++VL Y TG A+EF PP R++H+ +A+ G A T + +V Y+V E+G+Q +FQ+CP +V ++GEL+F+NPYG+LPG +YGYLPF+
Sbjct: 22 FKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKETGKEGGAXXXXXXGVDYVPDSDLCALEF--PPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVVESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFE 204
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A8J2SY59_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY59_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.970e-18 Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 1
Query: 1 LASAKGFQYSLVEDFSESRFSFSERYMFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRTGAIEFEQPPVDLCR-SIHSFALGDASRTIGGAGTFRGKVLDHYEVKEAGLQYAMFQLCPAPQEPDVKVSGELTFKNPYGYLPGMYYGYLPFQ 483
LA +Y + ++ F+E YM+AS+EGP GGESY+ DL + + N+TV+ + T +DLC +I++ + + +T G + Y V AGLQY Q+C ++++G FKNPYG++PG Y+G+LPF+
Sbjct: 11 LALTTACRYEEATTYRANKMFFTEYYMYASDEGPFPFTGGESYVLADLRAKLS--MKGTRANVTVMAFSTDEELDSIDSIDLCLGNINTVSPREKRKTFAVTGDHPSHLYLKYSVHTAGLQYLALQVCDGGWLSGMELNGVFEFKNPYGFVPGRYFGFLPFE 170
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A7S2V230_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V230_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.120e-10 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 226 EQPPVDLCRSIHSFALGDASRTIGGAG-TFRGKVLDHYEVKEAGLQYAMFQLCPAP-QEPDVKVSGELTFKNPYGYLPGMYYGYLPFQV 486
E P V + + + G + +GG T+ + Y+V E GLQY + +CP P P + G ++F+NPYGYLPG+YYG+LP+ V
Sbjct: 73 EAPEVVVQQQPVAAGSGAEDQGLGGPMVTYHASIKAKYKVVETGLQYMVLGVCPLPFPAPVAAMQGTVSFRNPYGYLPGVYYGFLPYSV 161
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A6G0XSC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XSC5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.680e-9 Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 79 MFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRTGAIEFEQPPVDLCRSIHSFALGDASRTIGGAGTF-----RGKVLDH---------YEVKEAGLQYAMFQLCPAP---QEPDVKVSGELTFKNPYGYLPGMYYGYLPFQ 483
MFA+++GP L + GES+I +++D +T + D + + V Y + F ++ +S++ FA + S I A ++ R + L H YEVK +G + +C E + SG+LT +NPYG LP ++YG LPF
Sbjct: 53 MFATDQGPFLGKYGESHIELEIDGEHVTP-NMDGWRLVVFHYHADDLSFL---TNMEQSLYMFAC-NPSNQIFAADSYNSYFERSEFLVHNRLLRVRTSYEVKASGWIDTVIVVCSKSGDRSENSLNFSGKLTIRNPYGLLPAVFYGLLPFS 199
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Match: A0A1V9Z7L4_9STRA (Gpr7 transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7L4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.030e-5 Identity = 41/148 (27.70%), Postives = 67/148 (45.27%), Query Frame = 1
Query: 79 MFASNEGPSLDRGGESYIHIDLDVSVMTHVSSDAYNMTVLCYRTGAIEFEQPPVDLCRSIHSFA--LGDASRTIGGAGTFRGK----------VLDHYEVKEAGLQYAMFQLCPAPQEPD-VKVSGELTFKNPYGYLPGMYYGYLPFQ 483
MF +N+GP L G S++ + L + +T + D + + V Y+ + Q D ++ FA + D + G F V Y V +G ++ +CP D ++ +G LT +NPYG LP ++YG LPF
Sbjct: 1 MFGTNQGPILGEQGSSFVELALHGANVT-TAMDGWRVVVFHYQANDL---QTLADAEGNLALFACSMEDTDFEMDGVSHFSRHDYTIANESLAVATKYAVNSSGWVDSVVFVCPKGGRQDALQFTGSLTVRNPYGLLPAVFYGLLPFS 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13339.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13339.1.1 >prot_P-wetherbeei_contig13339.1.1 ID=prot_P-wetherbeei_contig13339.1.1|Name=mRNA_P-wetherbeei_contig13339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp LASAKGFQYSLVEDFSESRFSFSERYMFASNEGPSLDRGGESYIHIDLDVback to top mRNA from alignment at P-wetherbeei_contig13339:124..1376- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13339.1.1 ID=mRNA_P-wetherbeei_contig13339.1.1|Name=mRNA_P-wetherbeei_contig13339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1253bp|location=Sequence derived from alignment at P-wetherbeei_contig13339:124..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13339:124..1376- >mRNA_P-wetherbeei_contig13339.1.1 ID=mRNA_P-wetherbeei_contig13339.1.1|Name=mRNA_P-wetherbeei_contig13339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig13339:124..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top |