mRNA_P-wetherbeei_contig13334.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A835Z9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q1_9STRA) HSP 1 Score: 163 bits (412), Expect = 7.970e-42 Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 3
Query: 480 EDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
+D + SV +KA+L +HG++H + VER++LE V D+L S +KYDL ANICHDSPPGQGKEGQMDPL+GGSYRVHV+NRA++QWYE+QDLHVQE+MPQLIGLSESYIMI++RK
Sbjct: 356 KDYVGSKSVKELKAVLNAHGVAHA--DVVERAELEARVRDVL-------GASLSKYDLCANICHDSPPGQGKEGQMDPLQGGSYRVHVQNRASEQWYEIQDLHVQETMPQLIGLSESYIMIFRRK 471
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A6H5JZ76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ76_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.010e-41 Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 3
Query: 462 DPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
DP LP E+ L GMS+ +KA L + +S +E CVER +LE V D L++ L TKY+L+ N+CHDSPPGQGKEGQ DPL G YR HV+N+A +QWYEVQDLHVQE+MPQLIGLSESYI+IY+RK
Sbjct: 485 DPGLPKEEDLAGMSIKQLKAHLNKYSIS--SEECVERRELEEKVRDTLIKTVPELLA--TKYNLLVNVCHDSPPGQGKEGQTDPLSAGCYRAHVQNKATEQWYEVQDLHVQETMPQLIGLSESYIIIYERK 611
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A7S2CAK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAK8_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.550e-37 Identity = 71/127 (55.91%), Postives = 94/127 (74.02%), Query Frame = 3
Query: 474 PSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
P+E+ + MSV ++ +L ++ +CVE+S L V D +L FV TKYDL+ANICHDSPPGQ KEG + PLE GSYRVHV+N+A +QWYE+QDLHVQE+MPQL+GLSESY++IY+R+
Sbjct: 93 PTEEEVGEMSVKELREILTRQKVNFA--DCVEKSHLVDKVKDEILET----FV--TKYDLLANICHDSPPGQKKEGSVSPLEAGSYRVHVQNKATEQWYEIQDLHVQETMPQLVGLSESYMLIYERQ 211
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: D0MZT9_PHYIT (U4/U6.U5 tri-snRNP-associated protein, putative n=7 Tax=Phytophthora TaxID=4783 RepID=D0MZT9_PHYIT) HSP 1 Score: 141 bits (356), Expect = 8.240e-34 Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 453 VKVDPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEG--QMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRKA 857
+K+D LPSE+ L S+S +++LL H S E+CVE+SDL + +LR + TK++LVANICHDSP G+E Q +PL GSYRVHV+NRA +QWYE+QDLHVQE+MPQLIG+SESY+MIY+RKA
Sbjct: 367 LKLDQSLPSEEELREKSISELRSLLRKHNQS--TEDCVEKSDLV----EKILRVTQPC----TKFNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 493
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A833TV06_PHYIN (Ubiquitin carboxyl-terminal hydrolase domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A833TV06_PHYIN) HSP 1 Score: 141 bits (356), Expect = 1.170e-33 Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 453 VKVDPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEG--QMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRKA 857
+K+D LPSE+ L S+S +++LL H S E+CVE+SDL + +LR + TK++LVANICHDSP G+E Q +PL GSYRVHV+NRA +QWYE+QDLHVQE+MPQLIG+SESY+MIY+RKA
Sbjct: 395 LKLDQSLPSEEELREKSISELRSLLRKHNQS--TEDCVEKSDLV----EKILRVTQPC----TKFNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 521
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: W2PR18_PHYPN (USP domain-containing protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PR18_PHYPN) HSP 1 Score: 139 bits (350), Expect = 2.250e-33 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 453 VKVDPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEG--QMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRKA 857
+K+D LP+E+ L S+ ++ALL H S E+CVE++DL + +LR + + TKY+LVANICHDSP G+E Q +PL GSYRVHV+NRA +QWYE+QDLHVQE+MPQLIG+SESY+MIY+RKA
Sbjct: 304 LKLDQNLPTEEELREKSIPELRALLRKHNQS--TEDCVEKADLV----EKILRVT----LPCTKYNLVANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 430
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A8J4WQ59_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4WQ59_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.940e-32 Identity = 72/137 (52.55%), Postives = 98/137 (71.53%), Query Frame = 3
Query: 453 VKVDPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEG--QMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRKA 857
+K+D LPS + L S+S ++ LL H + +++CVE++DL + + L PS TKY+L+ANICHDSP G+E Q +PL G+YRVHV+NRA +QWYE+QDLHVQE+MPQLIG+SESY+MIY+RKA
Sbjct: 324 LKLDQSLPSAEELQNKSISELRTLLRKHKQN--SDDCVEKADLVEKILRVTL-PS-------TKYNLIANICHDSPVTTGQEAALQTNPLTEGTYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERKA 450
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A484DR60_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR60_BRELC) HSP 1 Score: 136 bits (343), Expect = 6.680e-32 Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 3
Query: 453 VKVDPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQG-KEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
+K+D LP E+ L S+ ++ALL H S A++CVE++DL + + +P TKY+LVAN+CHDSP G K Q +PL GSYRVHV+NRA DQWYE+QDLHVQE+MPQLIG+SESY+M+Y+RK
Sbjct: 388 LKLDQSLPPEEDLREKSILELRALLQEHNQS--AKDCVEKADLIAKILQVA-QPC-------TKYNLVANVCHDSPVATGQKAAQTNPLTEGSYRVHVQNRATDQWYEIQDLHVQETMPQLIGVSESYLMVYERK 512
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: X5IAE6_9STRA (Ubiquitin specific peptidase 39 n=1 Tax=Ciliophrys infusionum TaxID=38824 RepID=X5IAE6_9STRA) HSP 1 Score: 137 bits (345), Expect = 9.810e-32 Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = 3
Query: 462 DPPLPSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
D PS++ L MS+ +KA+ +H + N VE+++L V +L TKYDL+ANI HDSPPGQ K+ QM PLE GSYRVH++N+A DQWYE+QDLHV E+MPQL+GLSESY++IY+R+
Sbjct: 490 DVSFPSDEELQEMSIGELKAICKAHRVH--PGNVVEKAELAEFVKTQVLDQII------TKYDLLANIVHDSPPGQKKDNQMSPLEAGSYRVHLQNKATDQWYEIQDLHVDETMPQLVGLSESYMLIYERQ 612
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Match: A0A7S1DAS1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAS1_CYCTE) HSP 1 Score: 131 bits (329), Expect = 1.360e-31 Identity = 64/127 (50.39%), Postives = 91/127 (71.65%), Query Frame = 3
Query: 474 PSEDALPGMSVSAIKALLASHGLSHVAENCVERSDLEGLVSDMLLRPSSALFVSRTKYDLVANICHDSPPGQGKEGQMDPLEGGSYRVHVRNRAADQWYEVQDLHVQESMPQLIGLSESYIMIYQRK 854
P+E + M+V +KALLA HG +A+N VE+S+L D +++ L KY+LVANI HDSP G+EG+ DPL+ GSY+ HV+++A QWY +QDLHV+E+MPQLIGLSESY++I++R+
Sbjct: 164 PTEAEVRAMNVKDLKALLARHGQDALAKNVVEKSELVEATVDFVVKSLPDLLAE--KYNLVANITHDSPSDVGREGKHDPLQEGSYKCHVQHKATGQWYLMQDLHVEETMPQLIGLSESYLLIFERQ 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13334.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13334.2.1 >prot_P-wetherbeei_contig13334.2.1 ID=prot_P-wetherbeei_contig13334.2.1|Name=mRNA_P-wetherbeei_contig13334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp MTKGLFWHGPVPSRGNLWWCLCCGSPSLCTAALVLVTNQFTMSVFPFSSNback to top mRNA from alignment at P-wetherbeei_contig13334:298..1534- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13334.2.1 ID=mRNA_P-wetherbeei_contig13334.2.1|Name=mRNA_P-wetherbeei_contig13334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1237bp|location=Sequence derived from alignment at P-wetherbeei_contig13334:298..1534- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13334:298..1534- >mRNA_P-wetherbeei_contig13334.2.1 ID=mRNA_P-wetherbeei_contig13334.2.1|Name=mRNA_P-wetherbeei_contig13334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig13334:298..1534- (Phaeothamnion wetherbeei SAG_119_79)back to top |