mRNA_P-wetherbeei_contig13328.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A1F3ZKP9_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3ZKP9_9PROT) HSP 1 Score: 139 bits (350), Expect = 8.720e-40 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 40 CIGTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIGTNDYERIFLPALRQAVARR 396
C+ A I + YLGT DCPYC+ WEARA+GEL+ A+ + +AVRY E++GETLR PIV RHYP E +W+ ++GP RGVPRF L V+G++ S GT Y ++FLPALR AVA+R
Sbjct: 5 CVLPARGEGRIEMFYLGTPDCPYCRQWEARARGELL---ASAEGQAVRYVEIRGETLRQPIVARHYPPEFQWVYEQIGPSRGVPRFLLAVDGRITVSAYGTGGYSQVFLPALRAAVAQR 120
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A1F4AZU0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AZU0_9PROT) HSP 1 Score: 138 bits (348), Expect = 2.300e-39 Identity = 68/132 (51.52%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 1 MLRRLFALFALVCCIGTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIGTNDYERIFLPALRQAVARR 396
ML R A F L+ A + I + YLGT DC YCQHWEARA+ EL+ A+P+ +A+RY E++GETLR PI HYP E +W+ ++GP RGVPRF L V+G++ SV+GT Y IFLPALR +A R
Sbjct: 1 MLARALAAFLLLASALPARSESRIEMFYLGTPDCRYCQHWEARARQELL---ASPEGKAIRYVEIRGETLRQPIAAHHYPPEYRWVYDQIGPSRGVPRFLLAVDGRITVSVLGTGGYNEIFLPALRATLASR 129
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A1F3A9H5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A9H5_9PROT) HSP 1 Score: 69.3 bits (168), Expect = 1.860e-12 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 13 LFALFALVCCIGTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIGTNDY 351
LFA A +G+A AA DI V+Y+G DCP C W+ K + + A+P++R V + EV+ L+ ER++P ++K + ++ G PRF ++ +G+V + G + +
Sbjct: 7 LFAPVAAAIALGSARAASDIKVIYVGGWDCPPCTTWKNAHKAKWL---ASPEFREVTWIEVEPPRLKEAYQERYWPGDLKPVLEQIPRKSGTPRFLIVKDGKVVSNGFGVSKW 116
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A521M6N5_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M6N5_9HYPH) HSP 1 Score: 64.7 bits (156), Expect = 1.240e-10 Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 1
Query: 19 ALFALVCCIGTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIG 339
AL A +G+A AA +I V+Y+G DCP C W+ K + A+P++R V + EV L+ ER++P ++K + +L G PRF ++ +G++ + G
Sbjct: 13 ALLAASTALGSAHAASEIKVIYVGGWDCPPCTAWKNANKAAWI---ASPEFRQVTWIEVDAPKLKEAYQERYWPGDLKPILDQLPRKSGTPRFLIVKDGKIVSNGFG 116
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A1Q3KLL9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KLL9_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 3.850e-10 Identity = 32/102 (31.37%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 46 GTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIGTNDY 351
GTA AA ++ V+Y+G DC C W+ + K + A+P+++ V + EV L+ ER++P ++K + +L G PRF ++ +G+V + G+N +
Sbjct: 28 GTAAAAAEVKVIYVGGWDCEPCSRWKNQHKPSWL---ASPEFQRVTWIEVDVPRLKEAYRERYWPGDLKPVLDQLPQKGGTPRFLIVQDGRVVSNEFGSNKW 126
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Match: A0A317MUJ6_9GAMM (Uncharacterized protein n=1 Tax=Plasticicumulans acidivorans TaxID=886464 RepID=A0A317MUJ6_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 4.840e-10 Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = 1
Query: 58 AADDIAVVYLGTNDCPYCQHWEARAKGELMELRATPDYRAVRYYEVKGETLRMPIVERHYPDEIKWLARKLGPMRGVPRFFLLVNGQVAWSVIGTNDYERIFLPALRQ 381
AA +IAV+YLG DCPYC+ WEA+ + M+ + VR E + R P P + L R P F LLV+GQ +VIG N + LPAL +
Sbjct: 39 AAREIAVLYLGARDCPYCRAWEAQQRPAFMDSALA---QRVRLLESVRASFREPARAADLPTGLALDTAALP--RPTPAFVLLVDGQAVATVIGGNGWSERLLPALER 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13328.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13328.1.1 >prot_P-wetherbeei_contig13328.1.1 ID=prot_P-wetherbeei_contig13328.1.1|Name=mRNA_P-wetherbeei_contig13328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MLRRLFALFALVCCIGTAGAADDIAVVYLGTNDCPYCQHWEARAKGELMEback to top mRNA from alignment at P-wetherbeei_contig13328:498..908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13328.1.1 ID=mRNA_P-wetherbeei_contig13328.1.1|Name=mRNA_P-wetherbeei_contig13328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig13328:498..908+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13328:498..908+ >mRNA_P-wetherbeei_contig13328.1.1 ID=mRNA_P-wetherbeei_contig13328.1.1|Name=mRNA_P-wetherbeei_contig13328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig13328:498..908+ (Phaeothamnion wetherbeei SAG_119_79)back to top |