mRNA_P-wetherbeei_contig13326.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13326.1.1
Unique NamemRNA_P-wetherbeei_contig13326.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A835YNY5_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY5_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.200e-95
Identity = 160/244 (65.57%), Postives = 192/244 (78.69%), Query Frame = 1
Query:   13 DLARSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAFVEGP 744
            ++AR VE+ NAE V   VD AA+DRVFS+SV LS+  IRH +  LC VS+QEI+H   ATFR +    DMS PR+FSLQ+LVEVADFNMDSRSRIVWA+IW VLS HFA IG+HDNP VAMYAIDSLRQLA KFM KEELRDFNFQRLF++PFETV+A S+ ++IRE +LRCV+ L+++R  +IRS WKSI +VL+ AARDPD +IA LAW  VD L     G  + YDFL++ KCLLAFVEGP
Sbjct: 1578 EVARGVERANAELVTAAVDQAAIDRVFSSSVALSTGGIRHMVQQLCAVSRQEIDHRRQATFRAKDVLGDMSAPRIFSLQRLVEVADFNMDSRSRIVWADIWGVLSSHFAAIGAHDNPQVAMYAIDSLRQLAHKFMAKEELRDFNFQRLFMRPFETVIALSRRLEIREFVLRCVEYLIRSRLASIRSAWKSIFAVLAAAARDPDANIARLAWATVDELATQHFG-ALTYDFLELTKCLLAFVEGP 1820          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: D8LQI7_ECTSI (BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI7_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 3.010e-86
Identity = 147/249 (59.04%), Postives = 192/249 (77.11%), Query Frame = 1
Query:    4 SPTDLARSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIA--ELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAFVEGP 744
            +PT+ AR VE++NAEAV+L VD A +DRVFSNS  LS++A++HF++ LC VS QE+NHS AATFR +    DMSQPR+F LQKLVEVADFNMDSR RIVWA++W VL  HF+ +G+H N  VA YA+DSL+QLA KF+ K+EL  FNFQRLFL PFE V  ++++ +I+ L++ C+ NLVQAR  +IRSGWKSI SVL++AA+D    +A  + +WG++ RLV+      V +DFLDV KCL+AFVEGP
Sbjct: 1195 NPTEQARDVERMNAEAVSLAVDPAMIDRVFSNSPSLSTEAVKHFVMQLCAVSSQEVNHS-AATFRSKDILGDMSQPRIFCLQKLVEVADFNMDSRGRIVWAHVWGVLGEHFSKLGAHPNRYVAEYAVDSLKQLALKFVYKKELEGFNFQRLFLCPFEAVFVATQHKEIKVLVMDCIQNLVQARSAHIRSGWKSIFSVLALAAKDGSGGLAFPQQSWGVLSRLVDKEMHSLV-HDFLDVIKCLVAFVEGP 1441          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A4D9CUH3_9STRA (SEC7 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUH3_9STRA)

HSP 1 Score: 275 bits (704), Expect = 2.790e-81
Identity = 143/255 (56.08%), Postives = 188/255 (73.73%), Query Frame = 1
Query:    4 SPTDLARSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEI------NHSGAATFR----LRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAFVE 738
            S  + AR V++ NAE +   +DAA ++RVF+ SV L S AI++F++ LC VSK E+      +H G   +R    L G +E   QPRVFSLQKLVEVADFNM +RSR+VWAN+WEVLS H+A +G HDN +VAMYAIDSLRQL+ KF+ KEELRDFNFQRLFLKPFE +MA+S++++IRELILRC+DNL+  R +NIRSGW+S+ +V S+AA  PD  + + A+ IVD+L  +     V +DF+D+  CLLAF E
Sbjct: 1139 SKAEAARQVDEFNAEQIMGAIDAAMIERVFTTSVALDSQAIQYFVLQLCEVSKMEVAVAPTAHHGGGGAYRPSQDLLG-KETALQPRVFSLQKLVEVADFNMAARSRLVWANVWEVLSRHYAAVGLHDNVAVAMYAIDSLRQLSMKFLAKEELRDFNFQRLFLKPFEVIMATSRSIEIRELILRCLDNLISVRAHNIRSGWRSMFAVFSLAASSPDEGLCQFAFDIVDQLFRAHFQFLV-FDFVDLVHCLLAFAE 1391          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A7S1XYK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYK4_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.030e-69
Identity = 123/237 (51.90%), Postives = 162/237 (68.35%), Query Frame = 1
Query:   22 RSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            R+ E  NAEA+AL +D   +DRV+++SV LS+ AI+ F+ +LC VSK EI  S A   R R    D++QPRVFSLQKLVEVAD NMD+R RIVWA IW  L+ HF   G+ DN  +AM+ +DSLRQL+ KF+ K+EL  F+FQ+LFL PFE +M +S +VQ REL+L CV NL  AR  +I SGW  IL+     A DP PS  ELA+G++D+L+ S  G  ++  F ++  CL AF
Sbjct:   21 RAQELTNAEALALCLDDFLLDRVYAHSVKLSATAIQEFVRALCEVSKDEIGSSRAG-LRQREALADLNQPRVFSLQKLVEVADANMDARPRIVWAAIWRTLTAHFEHAGTQDNSHLAMFTVDSLRQLSIKFLSKDELAHFSFQKLFLLPFERIMGNSNHVQTRELVLVCVQNLSLARAKSIHSGWSVILATFEKGAMDPAPSNRELAFGVLDKLL-SRHGDVLKRHFRELVACLFAF 255          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A485LS78_9STRA (Aste57867_25067 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS78_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.530e-65
Identity = 127/244 (52.05%), Postives = 167/244 (68.44%), Query Frame = 1
Query:   22 RSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIAE-------LAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            RS+E+ N++ VA  +D   VDRVFS+SVHLS++AI+  ++ LC VS  E+      T R    RE M+ PRVFSLQKLVEVAD NM  RSR+VWA++W+VL+ HF  IG HDN  +AMYAIDSL+QL+ KF+ KEELRDFNFQRLFL PFE +MA++ +++IREL+L CV N++  R  NI+SGWKSI  VL +AA   DP+  E       L + I   ++ +     V   F+D  +CLLAF
Sbjct:  988 RSLEEENSQRVASEIDPLQVDRVFSSSVHLSNNAIQDLVLQLCVVSLTEV---AGITGRGVSNRE-MNAPRVFSLQKLVEVADMNMHVRSRVVWASVWKVLTRHFTTIGCHDNLGIAMYAIDSLKQLSMKFLEKEELRDFNFQRLFLAPFEIIMANTVSIEIRELVLGCVQNMILGRVKNIKSGWKSIWGVLRVAAETYDPAEGEADRPVVALGFSIAQMILTTHFDRVVSV-FVDAIECLLAF 1226          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: K3W665_GLOUD (SEC7 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W665_GLOUD)

HSP 1 Score: 228 bits (582), Expect = 6.530e-65
Identity = 124/243 (51.03%), Postives = 163/243 (67.08%), Query Frame = 1
Query:   25 SVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPS-------IAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            ++E  NA  V   +D+ A DRVFS+SV L+  AI+ F++ LC VS  E   SG +  R        S PRVFSLQKLVEVAD NM  RSR++WA+ W+VLS HF  IG HDN S+AMYAIDSLRQL+ KF+ +EEL+DFNFQRLFL PFE +MA++ +++IREL+LRCV+N++ AR  NI+SGWK+I  VL +AA   +P        I  L + I  R+ E+     +   F+D  +CLLAF
Sbjct: 1121 AIEDENASRVMAEIDSLASDRVFSSSVSLNDTAIQEFVLQLCVVSLTEC--SGVSNGRSSRQDNSFSPPRVFSLQKLVEVADMNMHMRSRVIWASTWKVLSRHFTTIGCHDNLSIAMYAIDSLRQLSMKFLEREELKDFNFQRLFLTPFEVIMANAVSMEIRELVLRCVENMILARVTNIKSGWKTIWGVLRVAAETYEPGNSDQQDRIVRLGFQIAKRIFENHFDRIIEV-FVDAVECLLAF 1360          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A5D6XNM4_9STRA (SEC7 domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNM4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.400e-63
Identity = 128/254 (50.39%), Postives = 163/254 (64.17%), Query Frame = 1
Query:   25 SVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPS------------------IAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            ++E  NA  V   +DA A DRVFS+SV L+  A++ F++ LC VS  E   SG +T R        S PRVFSLQKLVEVAD NM +RSR+VWA+ W+VLS HF  IG HDN SVAMYAIDSLRQL+ KF+ +EEL+DFNFQRLFL PFE +MA++   +IREL+LRCV+NL+ AR  NI+SGWK+I  VL +AA   +P                   I +L + I  R+ E      +   F+D  +CLLAF
Sbjct: 1165 AIEDENAARVLAEIDALASDRVFSSSVALTDTAVQEFVLQLCVVSLTEC--SGVSTGRSSRQDSAFSAPRVFSLQKLVEVADMNMRTRSRVVWASTWKVLSRHFTTIGCHDNLSVAMYAIDSLRQLSMKFLEREELKDFNFQRLFLAPFEVIMANAVTPEIRELVLRCVENLILARVANIKSGWKTIWGVLRVAAETYEPGGSAGGGXXXXIGGSGDDHIVQLGFQIAKRVFEQHFERIIEV-FVDAVECLLAF 1415          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A6G0X2Z8_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2Z8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.680e-63
Identity = 121/247 (48.99%), Postives = 165/247 (66.80%), Query Frame = 1
Query:    7 PTDLARSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPS-----IAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            P D   + E LNA+ +   +D  A+DRVFSNS  LS ++++ F+  LC VS  E          +R T   +S PRVFSLQKLVEVAD NM  RSR+VWA++W VLS HF  IG HDN S+AMYAIDSL+QL+ KF+ K+ELRDFNFQRLFL PFE +M ++ +++IREL+L CV N++ +R NNI+SGWK+I  VL +AA   DP+     +  + + +   +V++     V   FLD+ +C+LAF
Sbjct:  937 PDDQLAANEALNAQQILDQIDGLAIDRVFSNSALLSDNSVQEFVQQLCIVSLTECQGLSGVGMTVRLT--SLSLPRVFSLQKLVEVADMNMHVRSRVVWASMWSVLSRHFTTIGCHDNLSLAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLAPFEIIMGNAVSMEIRELVLSCVHNMILSRVNNIKSGWKTIWGVLRVAAETFDPTEKDDRVVLMGFMLAKTIVDTHFDRVVTV-FLDLIECILAF 1180          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A6G0X305_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X305_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.740e-63
Identity = 121/244 (49.59%), Postives = 163/244 (66.80%), Query Frame = 1
Query:   22 RSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAARDPDPSIAE-------LAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            +S+E+ N+  V   +D   VDRVFS+SVHLS++AI+  ++ LC VS  E       T  +R    +MS PRVFSLQKLVEVAD NM  RSR+VWA++W+VL+ HF  IG HDN  +AMYAIDSL+QL+ KF+ K+ELRDFNFQRLFL PFE +MA++  ++IREL+L CV N++  R  NI+SGWK+I  VL +AA   DP+  E       + + I   ++ +     V   F+D  +CLLAF
Sbjct: 1001 QSLEEENSHRVHAEIDPLQVDRVFSSSVHLSNNAIQDLVLQLCVVSLTECAGVSGRTVSVR----EMSAPRVFSLQKLVEVADMNMHVRSRVVWASVWKVLTRHFTTIGCHDNLGIAMYAIDSLKQLSIKFLEKDELRDFNFQRLFLAPFEIIMANAVAIEIRELVLGCVQNMILGRVRNIKSGWKTIWGVLRVAAETYDPAQGEADRPVVAMGFSIAQMILTTHFDRVVSV-FVDAIECLLAF 1239          
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Match: A0A1V9ZTE7_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTE7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.750e-63
Identity = 123/241 (51.04%), Postives = 162/241 (67.22%), Query Frame = 1
Query:   25 SVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLCGVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIVWANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQRLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLSIAAR-----DPDPSIAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAF 732
            ++E+ NA  V   +D   VDRVFS+SVHLS+ AI+ FL+ LC VS  E           R   ++ + PRVFSLQKLVEVAD NM  RSR+VWA +W+VLS HF  IG  DN S+AMYAIDSL+QL+ KF+ K+ELRDFNFQRLFL PFE +MA++ +++IREL+L CV N++  R  NI+SGWK+I  VL +AA      D D  I ++ +GI   ++E+     V   F+D  +CLLAF
Sbjct: 1019 ALEEENAARVNAEIDPLQVDRVFSSSVHLSNAAIQEFLLQLCVVSLTECAGVSGRVVSSRNMSQNAA-PRVFSLQKLVEVADMNMHVRSRVVWAAMWKVLSRHFTTIGCDDNLSIAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMANAMSMEIRELVLSCVQNMILGRVRNIKSGWKTIWGVLRVAAETYDHLDGDDRIVQMGFGISKMILETHFDRVVSV-FVDAIECLLAF 1257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13326.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNY5_9STRA1.200e-9565.57SEC7 domain-containing protein n=1 Tax=Tribonema m... [more]
D8LQI7_ECTSI3.010e-8659.04BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax... [more]
A0A4D9CUH3_9STRA2.790e-8156.08SEC7 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S1XYK4_9STRA1.030e-6951.90Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A485LS78_9STRA3.530e-6552.05Aste57867_25067 protein n=1 Tax=Aphanomyces stella... [more]
K3W665_GLOUD6.530e-6551.03SEC7 domain-containing protein n=1 Tax=Globisporan... [more]
A0A5D6XNM4_9STRA1.400e-6350.39SEC7 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6G0X2Z8_9STRA6.680e-6348.99SEC7 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A6G0X305_9STRA6.740e-6349.59SEC7 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A1V9ZTE7_9STRA6.750e-6351.04Brefeldin A-inhibited guanine nucleotide-exchange ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13326contigP-wetherbeei_contig13326:96..1774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQI7
PFAMsDCB,DUF1981,Sec7,Sec7_N
Model size747
Max annot lvl2759|Eukaryota
KEGG koko:K18442
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.94e-87
EggNOG OGsCOG5307@1|root,KOG0929@2759|Eukaryota
Descriptionregulation of ARF protein signal transduction
Cds size747
COG categoryK
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185981.4646652-CDS-P-wetherbeei_contig13326:95..1551683185981.4646652-CDS-P-wetherbeei_contig13326:95..155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13326 96..155 -
1683185981.47343-CDS-P-wetherbeei_contig13326:331..6071683185981.47343-CDS-P-wetherbeei_contig13326:331..607Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13326 332..607 -
1683185981.4807591-CDS-P-wetherbeei_contig13326:949..10991683185981.4807591-CDS-P-wetherbeei_contig13326:949..1099Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13326 950..1099 -
1683185981.4879973-CDS-P-wetherbeei_contig13326:1513..17741683185981.4879973-CDS-P-wetherbeei_contig13326:1513..1774Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13326 1514..1774 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13326.1.1prot_P-wetherbeei_contig13326.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13326 96..1774 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13326.1.1

>prot_P-wetherbeei_contig13326.1.1 ID=prot_P-wetherbeei_contig13326.1.1|Name=mRNA_P-wetherbeei_contig13326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
TSPTDLARSVEKLNAEAVALFVDAAAVDRVFSNSVHLSSDAIRHFLVSLC
GVSKQEINHSGAATFRLRGTREDMSQPRVFSLQKLVEVADFNMDSRSRIV
WANIWEVLSGHFADIGSHDNPSVAMYAIDSLRQLAFKFMVKEELRDFNFQ
RLFLKPFETVMASSKNVQIRELILRCVDNLVQARQNNIRSGWKSILSVLS
IAARDPDPSIAELAWGIVDRLVESGAGPTVRYDFLDVAKCLLAFVEGPH
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mRNA from alignment at P-wetherbeei_contig13326:96..1774-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13326.1.1 ID=mRNA_P-wetherbeei_contig13326.1.1|Name=mRNA_P-wetherbeei_contig13326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1679bp|location=Sequence derived from alignment at P-wetherbeei_contig13326:96..1774- (Phaeothamnion wetherbeei SAG_119_79)
ACGAGCCCGACGGATCTGGCGCGCTCCGTCGAGAAACTCAACGCGGAGGC CGTGGCGCTGTTCGTGGATGCCGCCGCAGTCGACCGCGTCTTCTCCAATT CTGTGCACCTGTCGTCGGACGCGATCCGGCACTTTTTGGTGTCACTGTGC GGTGTGAGCAAGCAGGAGATCAACCACAGCGGGGCGGCGACGTTCCGGCT GCGGGGCACGAGGGAGGACATGAGCCAGCCGCGCGTCTTCTCGCTGCAAA AGCTCGTCGAGGTGAGTTTGAGTAAGATTTGCGTTGGCACGGCTTCTGCT TTTGGTTCGCAAAGGGATGGAAGGGGGTGCGTGTTATTCCATTTCGGAAG CTTAAGCTGAGCTTAAAGGATAGGAGAGGCTGCGGAGCAATTGATTGGTC GAATTTGTTCACAGGGATAACGGCGGAACACGGGGGCGCACATTGGCTGA GCAGCACAACGGAAGGAACTGAGGTTTATTTAGGCTTCCGGTGGCATCTT CAGTTTTTGGACCGACGCCTAGAATATAGAGCTTCGCATGGAAGCCGGAG CCATTAAAATTTTCACATCAGCTTCATCTACCGCGCTGACTCTTTGTCGC CTCGAGCCCTCTCTGCGTCTGACGCGGCATATTTCGGCCTTCGGCGGCCT GTTTCTCCCATCGATCTCCGCGCAGGTGGCGGACTTCAACATGGACAGCC GGAGCCGCATCGTGTGGGCCAACATATGGGAAGTGCTTTCGGGGCACTTC GCCGACATCGGCAGCCATGACAACCCCTCCGTCGCCATGTACGCCATTGA CTCGCTACGCCAGCTCGCTTTCAAGGTGCGCGCATGCATTGTTTGTAAGG GAGGGAGTTTTTCCTGGACGTTGTTTGTTTCGCCCTGCTCGTTTAGGCTC GTAAGGGTCTAGATGGTTGCACCATCGACCCGCCCCGGCAGCGTATTCTT GGAAGATCGCAGTCTTTTGAGTTTTCTTGGTTCCTTCATTGCTGCACTCC GTGGCATATTCTGGCCTGACCCGAATATCGCTGCTTGGCATTATCGCCGC CTGCCGCTGTCTCGCCTTCCCGCCGTGGCTCTGGCGTCCGATCCGGTATG ACTGCTGACTGTCTTTCGCCCACGGCTTCGTGCCCTTCCTTCTCCCGCCT CTCTTGTTTATCTGCAGTTTATGGTCAAGGAGGAGCTGCGGGACTTCAAC TTCCAGCGGCTCTTCCTGAAACCGTTCGAAACCGTCATGGCCTCTTCCAA GAACGTGCAGATCCGTGAGCTCATCCTGCGCTGCGTCGACAACCTCGTGC AGGCGCGGCAGAATAACATTCGATCGGGATGGAAGTCTATCCTGTCCGTC CTGAGCATCGCCGCGCGGGACCCGGATCCATCCATCGCGGAGCTGGCATG GGGCATCGTGGACCGGCTCGTAGAGTCTGGCGCGGGGCCGACGGTGAGTC AATGAATGTTCTGGCATCATCCGGGGTGGATTTGCCAGGTTTCCCGGTTC TGTTCACGCCTGCAAGAGCGAGCTAGATTTTCTGAATTCGCTTCTTCCGC CAAAGTGTCGTTGCTTACGAAGTTCAGAAATCTTTCCCCCCTTCCCCTCT TTAATCCAACCGTAAAAAGGTCCGCTACGACTTTCTGGACGTGGCCAAGT GCCTCCTGGCCTTCGTGGAAGGCCCCCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13326:96..1774-

>mRNA_P-wetherbeei_contig13326.1.1 ID=mRNA_P-wetherbeei_contig13326.1.1|Name=mRNA_P-wetherbeei_contig13326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig13326:96..1774- (Phaeothamnion wetherbeei SAG_119_79)
ACGAGCCCGACGGATCTGGCGCGCTCCGTCGAGAAACTCAACGCGGAGGC
CGTGGCGCTGTTCGTGGATGCCGCCGCAGTCGACCGCGTCTTCTCCAATT
CTGTGCACCTGTCGTCGGACGCGATCCGGCACTTTTTGGTGTCACTGTGC
GGTGTGAGCAAGCAGGAGATCAACCACAGCGGGGCGGCGACGTTCCGGCT
GCGGGGCACGAGGGAGGACATGAGCCAGCCGCGCGTCTTCTCGCTGCAAA
AGCTCGTCGAGGTGGCGGACTTCAACATGGACAGCCGGAGCCGCATCGTG
TGGGCCAACATATGGGAAGTGCTTTCGGGGCACTTCGCCGACATCGGCAG
CCATGACAACCCCTCCGTCGCCATGTACGCCATTGACTCGCTACGCCAGC
TCGCTTTCAAGTTTATGGTCAAGGAGGAGCTGCGGGACTTCAACTTCCAG
CGGCTCTTCCTGAAACCGTTCGAAACCGTCATGGCCTCTTCCAAGAACGT
GCAGATCCGTGAGCTCATCCTGCGCTGCGTCGACAACCTCGTGCAGGCGC
GGCAGAATAACATTCGATCGGGATGGAAGTCTATCCTGTCCGTCCTGAGC
ATCGCCGCGCGGGACCCGGATCCATCCATCGCGGAGCTGGCATGGGGCAT
CGTGGACCGGCTCGTAGAGTCTGGCGCGGGGCCGACGGTCCGCTACGACT
TTCTGGACGTGGCCAAGTGCCTCCTGGCCTTCGTGGAAGGCCCCCAC
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