mRNA_P-wetherbeei_contig13324.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13324.1.1
Unique NamemRNA_P-wetherbeei_contig13324.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: UPI001873269F (LPS export ABC transporter permease LptF n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001873269F)

HSP 1 Score: 311 bits (798), Expect = 2.000e-97
Identity = 161/327 (49.24%), Postives = 228/327 (69.72%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGLRR 981
            + IVNRGL    F     LL+P+FL +V P+A FV+ LF+Y++L +DSE+VVMRA G    QLARPAI+LG+L T+  Y +SLY +P+SF  FK+L +  R+D+S +LLQEG FT +   +TVYVR R ++G+LRGILVHD+RDP  P+T++AERG L  ++ GPRV++ NGNRQ+V    G+ SLLYFDRY+VE+ + ++  + RWREP ER+++ELL+P  ++  D+++   LIAEGH RL  PLY L  VL+G+A LL G+FNRRG  +R+L A AC   +E +S+A+ +LA R  A +P +Y   L    ++ + L     RR
Sbjct:   37 DYIVNRGLPASTFLTFVGLLLPSFLGVVLPVAAFVAALFIYHKLAMDSEMVVMRAAGLSQLQLARPAIMLGVLVTIAVYSISLYFLPVSFRNFKDLQNSFRSDFSTVLLQEGVFTALTDEITVYVRQRSADGELRGILVHDNRDPKKPVTMMAERGALVASETGPRVVMENGNRQEVTPGTGRFSLLYFDRYTVELSEFSEAAQSRWREPKERFLNELLFPS-ADQRDQRYYQELIAEGHHRLVGPLYTLVFVLIGMAALLAGEFNRRGQTKRVLAAIACVAALEGVSLALHDLATRSAAAVPAMYLAVLVSAGISLYVLLRKPYRR 362          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A2E9Y4C3_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y4C3_9PROT)

HSP 1 Score: 311 bits (797), Expect = 3.870e-97
Identity = 167/342 (48.83%), Postives = 233/342 (68.13%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGL-RRRRPATDEAPSAAAG 1023
            +LI+N+GL    F  LT+L++P+ L+++ PIALF + L+VYN L  DSE+VVMRA+G G   LARPA+LL L  TL GY LSLY++P     FK++ + +R + S +LLQEG F  IG SLTVY+RAR+S G++ GILVHDSR+   P+T++AE+G +  T  GPR I++NGNRQQ+D  AG+LSLL FDRY++++ Q  Q  E RW EPGERY+ EL WP  + ++D   A R+ AEGH RL++PLY+LA  L+ LA +L G+FNRRG   R++ A  C   +  + + + +L  ++PALIP LY   +  MA+  + L N  + RRRR A  + P   AG
Sbjct:   41 DLIINKGLSASYFSQLTLLILPSVLTIILPIALFAAVLYVYNNLDGDSEIVVMRALGLGNLSLARPALLLALATTLAGYFLSLYIMPTGQRAFKDMKTSLRTNLSYVLLQEGTFNTIGDSLTVYIRARQSGGEMLGILVHDSREKQRPVTMIAEKGAMVRTKGGPRFIMVNGNRQQIDHGAGQLSLLQFDRYALDLSQFVQRDEDRWLEPGERYLHELFWPG-TGADDVANAARMRAEGHDRLASPLYSLAFTLIALAAVLSGEFNRRGRRWRIVAAVGCITLLRAVGLGLVSLPAKVPALIPLLYLNIVLAMAICLYTLLNGRVWRRRRQAQQDMPQTDAG 381          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A2E9X8G7_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9X8G7_9PROT)

HSP 1 Score: 308 bits (789), Expect = 4.980e-96
Identity = 153/306 (50.00%), Postives = 216/306 (70.59%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLY 918
            +LIVNRGL +  F Y++ L++P FL+L+ PI+LF + LF YNR+T+DSELVVMRA G  P  L++PA+LL  + T+  Y L+LYL+P+SF +FK+    +R+D+S ++LQEG FT I   +  +VR R S G+L GI+VHD R+   P+T++AE G L  TD GP+VI+LNGNRQ+V R  GKLSLL+FDRYS +I     T   RWREPGER++DEL +PD ++ N++  A  L AEGH RL+ P+YAL   ++ LA LL G+F+RRGLG+R+  A    + ++  ++   NLA R P+L+P +Y
Sbjct:   37 DLIVNRGLPVSMFLYMSALMLPTFLALILPISLFAAVLFAYNRMTVDSELVVMRAAGISPNGLSKPALLLAGIITVVIYCLTLYLLPMSFREFKDQQVTIRSDFSTVILQEGVFTEISKGIMAFVRERGSEGELLGIIVHDGRNMEQPVTIMAENGALVRTDRGPQVIMLNGNRQEVSRETGKLSLLHFDRYSFDIPTANDTTGKRWREPGERFLDELFYPDMTDENNKFNAANLRAEGHERLTMPIYALTFTIIALAALLSGNFDRRGLGRRMAVAILLIIIIQAGALGFTNLATRFPSLVPLVY 342          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A2A5E1F6_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5E1F6_9PROT)

HSP 1 Score: 308 bits (789), Expect = 1.540e-95
Identity = 163/329 (49.54%), Postives = 221/329 (67.17%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGLRRRR 987
            +LIVNRGL L AF  LT+ L+P +L +V PIA F + LF YN+LT+DSELV++RA G  P  +A P I L LL T+  Y ++LY +P S+ +FK+L    R +YS +LL+EG F ++G  LTVYVR R   GDL GIL+HDSR+    +T++AE G    TD GP+VIL+NGNRQ++D    +L LLYFDRY+V++G   +T E+RWREP ERY+  L +P    ++DR    +LI+EGH RL++PLY LA + + LA L  GDFNRRG   R+L A A G+ ++ L I I N+A + PA IP +YA+P   +A+    LT   L RRR
Sbjct:   75 DLIVNRGLELTAFVSLTLHLLPTYLVIVIPIAFFAAVLFTYNKLTMDSELVILRAAGLPPRTMAAPGIALALLLTVVCYSITLYFLPSSYREFKDLQFLFRHNYSAVLLKEGVFNSLGDKLTVYVRERAGEGDLYGILMHDSRNAKQSVTIMAEHGKFVRTDSGPKVILINGNRQEIDEKTSRLQLLYFDRYTVDLGNIDKTPEYRWREPRERYLPGLFFPA-DTADDRNNKGKLISEGHQRLTSPLYNLAFLFIALAALFSGDFNRRGQTGRILAAVAIGVAIQLLGIGINNMASKTPATIPLMYAVPFLTVAIGYRVLTTGRLLRRR 402          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A843RMN9_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RMN9_9PROT)

HSP 1 Score: 305 bits (780), Expect = 9.610e-95
Identity = 158/327 (48.32%), Postives = 223/327 (68.20%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGLRR 981
            + IVNRGL   +F     LL+P+FL +V PIA FV+ LFVY+++T+DSE+VVMRA G    QLARPAI+L +L TL  Y +SLYL+P+SF  FK+L +  R D+S +LLQEG FT +   +TVYVR R  +G+LRGILVHD+RD   P+T++A+RG L  +  GPRV++ NGNRQ+VD   G+ SLLYFDRY++E+ +  +  + RWR+P ER++ ELLWP  ++  D+++   LIAEGH RL  PLY +   L+ +A LL G+F+RRG  +R+L A AC   +E +S+A+ +LA R    +P +YA  +    L+ + L     RR
Sbjct:   37 DYIVNRGLPASSFLTFVALLLPSFLGIVLPIASFVAVLFVYHKMTMDSEMVVMRAAGLSQFQLARPAIILSILVTLAVYAISLYLLPVSFRHFKDLQNSFRNDFSTVLLQEGVFTALNNEITVYVRERLGDGELRGILVHDNRDAKKPVTMMAQRGALVASAAGPRVVMENGNRQEVDSETGRFSLLYFDRYTIELSEFGEAAQSRWRDPKERFLPELLWPS-ADRRDQRYRQELIAEGHHRLVGPLYTIVFALIAMAALLAGEFDRRGQARRVLAAIACVAALEGISLALHDLASRNAVAVPAMYATLVLATGLSLYVLLRRPNRR 362          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: UPI00142274D4 (LPS export ABC transporter permease LptF n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00142274D4)

HSP 1 Score: 303 bits (775), Expect = 5.340e-94
Identity = 158/307 (51.47%), Postives = 214/307 (69.71%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYA 921
            + IVNRGL    F     LL+P+FL +V P+A FV+ LFVY++LT+DSE+VVMRA G    QLARPAILLG++ TL  Y +SLY +P SF  FK+L    R+D+S +LLQEG FT +   +TVYVR R   G+LRGILVHD+RDP   +T++AERG L  ++ GPRV++ NGNRQ+V    G+ SLLYFDRY+VE+       + RWREP ER++ ELL P   +  D+++   L+AEGH R+ APLY+L  V++G+A LL G+FNRRG  +R+L A AC   +E +S+A+ +LA R  A +P +YA
Sbjct:   37 DYIVNRGLPASTFLTFVGLLLPSFLGVVLPVACFVAALFVYHKLTMDSEMVVMRAAGLSQLQLARPAILLGVIVTLAVYSISLYFLPASFRNFKDLQHAFRSDFSAILLQEGVFTTVTDEITVYVRERSPEGELRGILVHDNRDPKKAVTMMAERGALVPSESGPRVVMENGNRQEVQPGTGRFSLLYFDRYTVELADFGNAPQARWREPKERFLHELLSPS-DDRRDQRYRLELLAEGHQRIVAPLYSLVFVVIGMAALLAGEFNRRGQLKRVLAAIACVAALEGVSLALHDLASRNTAAVPAMYA 342          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A7C7PWS8_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PWS8_9PROT)

HSP 1 Score: 302 bits (774), Expect = 7.520e-94
Identity = 162/327 (49.54%), Postives = 219/327 (66.97%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGLRR 981
            + IVNRGL    F     LL+P+FL +V P+A FV+ LFVY++L +DSE+VVMRA G    QLARPAI+LG++ TL  Y +SLY +P SF  FK+L    R+D+S +LLQEG FT +   +TVYVR R   G+LRGILVHD+RDP  P+T++AERG L  ++ GPRV++ NGNRQ+V    G+ SLLYFDRY+VE+       + RWREP ER++ ELL P   +  D+++   LIAEGH R+  PLY+L  V++G+A LL G+FNRRG  +R+L A AC   +E +S+ + +LA R  A IP +YA     + LA + L     RR
Sbjct:   37 DYIVNRGLPASTFLTFVALLLPSFLGVVLPVACFVAALFVYHKLAMDSEMVVMRAAGLSQLQLARPAIILGVIVTLSVYAISLYFLPASFRSFKDLQHAFRSDFSAVLLQEGVFTTVTDEITVYVRERSPEGELRGILVHDNRDPKKPVTMMAERGALVASEAGPRVVMENGNRQEVQPGTGRFSLLYFDRYTVELTDFENAPQTRWREPKERFLPELLNPG-DDRRDQRYRLELIAEGHHRIVGPLYSLVFVVIGMAALLAGEFNRRGQVKRVLAAIACVAALEGISLTLHDLASRHVAAIPAMYAAVAISLGLALFVLLRRPARR 362          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A2E9WUE9_9PROT (Lipopolysaccharide export system permease protein LptF n=3 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9WUE9_9PROT)

HSP 1 Score: 301 bits (772), Expect = 1.540e-93
Identity = 149/306 (48.69%), Postives = 216/306 (70.59%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLY 918
            +LIVNRGL    F Y+++L++P FL+L+ P++LF + LF YNRLT+DSEL+VMRA G     L++ A LL  + T+  Y L+LYL+PLSF  FK+    +R D+S +LLQEG FT + T +TV+VR R + G+L G+LVHD R+P  P+T++AE G L  TD+GP+VI++NGNRQ+V + +G LSLLYFDRY +++    +T + RWREP ER++DEL +PD ++ N++  A +L AEGH RL+ P+YAL   ++ LA LL GD+ RRGLG+R+  A    + ++  ++   NLA R P L+P +Y
Sbjct:   37 DLIVNRGLPFSMFLYMSMLMLPTFLALILPVSLFXAVLFAYNRLTMDSELLVMRAAGISQTGLSKSAFLLAGIVTVIIYSLTLYLLPLSFRXFKDRQVTIRNDFSTVLLQEGVFTELATGITVFVRERGAEGELLGVLVHDGRNPEKPVTMMAENGALVRTDEGPQVIMVNGNRQEVSKDSGXLSLLYFDRYVLDVHSVDKTLDKRWREPRERFLDELFFPDMTDGNNQFNAAKLRAEGHQRLTLPIYALTFTVIALAALLSGDYARRGLGKRITTAILLIVAIQGAALGFTNLAARFPWLVPLIY 342          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A2D6T406_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T406_9PROT)

HSP 1 Score: 300 bits (769), Expect = 4.440e-93
Identity = 161/324 (49.69%), Postives = 221/324 (68.21%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPG 972
            +LIVNRGL  G FFYLT+LL+P FLSL+ PIALF + LF Y+RL+ DSE+VV+RA G    QLARPA+ L L AT+  Y L+LYL PL F  FK+    +R+ Y+ +LL+EG F  +   +TVYVR R+S G+LRGILVHD+R P+ P+T++AERG L  T +GPR +++NGNRQ+V R   +LSLLYFDRY++++G  A+T    WREPGERY+ ELL P  S  +D     R+ AE H RL +PLY LA  L+ LA +L G+FNRRG  +R++  AA  +  + +++ +  L  + PAL P +Y   +  +  A+W L+  G
Sbjct:   37 DLIVNRGLSAGHFFYLTMLLLPGFLSLILPIALFCAVLFTYHRLSFDSEIVVLRAAGLSHRQLARPALALALGATIVTYGLTLYLTPLGFRTFKDQQFTIRSSYASVLLREGVFNTLVDGVTVYVRERKSGGELRGILVHDNRQPSKPVTVMAERGILTNTAEGPRFVMVNGNRQEVARDPDQLSLLYFDRYALDLGLIAETSGEHWREPGERYLPELLNPG-SGLDDINNTDRMKAEAHKRLVSPLYCLAFTLIALAGILSGEFNRRGEWRRIMAGAAAAVAFQAVALGLMPLVGKTPALAPLMYLNIVVAIVGASWVLSGRG 359          
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Match: A0A6N7F815_9PROT (Lipopolysaccharide export system permease protein LptF n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F815_9PROT)

HSP 1 Score: 300 bits (768), Expect = 8.050e-93
Identity = 160/329 (48.63%), Postives = 218/329 (66.26%), Query Frame = 1
Query:    1 ELIVNRGLGLGAFFYLTILLMPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILLGLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTSLTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILLNGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLWPDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGLGQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWALTNPGLRRRR 987
            E+IVNRGL    F YLT+LL+P FLS++ P+A+F +TLF YN+L IDSEL+V+RA G GP  L RPA+++  L T+  Y ++LY +P SF +FK+L   +R  Y  +LLQEG F NI   LTVYVR R + G+L GI+VHDSR+   P+T++AE G +   + GPRV++  GNRQ++    G+LSLLYFDRY+ +IG T +  E RWREP ER++DELL+P   ES    F  +   E H RL+ PL  LA  LV LA LL GDF+RRG   R+L A    + +E+  +   N+  ++PA +P +Y  PL  +  A+WAL + G RRRR
Sbjct:   49 EMIVNRGLSAPLFVYLTLLLLPTFLSVIMPVAVFAATLFTYNKLLIDSELLVLRAGGLGPFALGRPALIMATLVTVICYAITLYFMPASFREFKDLQYTLRNAYPSVLLQEGVFNNISDGLTVYVRERSAGGELHGIIVHDSRNEQQPVTMMAEDGAIVTGERGPRVVMGTGNRQEISEKDGRLSLLYFDRYTFDIGDTDKPGEVRWREPRERFLDELLFPREQESTLFSFQ-KFRMEAHHRLAGPLLPLAFTLVALALLLHGDFDRRGQTWRILAAVGVVVVIESAMLGFKNIGEKLPATVPMMYLTPLLPVVAASWALAS-GRRRRR 375          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13324.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001873269F2.000e-9749.24LPS export ABC transporter permease LptF n=1 Tax=P... [more]
A0A2E9Y4C3_9PROT3.870e-9748.83Lipopolysaccharide export system permease protein ... [more]
A0A2E9X8G7_9PROT4.980e-9650.00Lipopolysaccharide export system permease protein ... [more]
A0A2A5E1F6_9PROT1.540e-9549.54Lipopolysaccharide export system permease protein ... [more]
A0A843RMN9_9PROT9.610e-9548.32Lipopolysaccharide export system permease protein ... [more]
UPI00142274D45.340e-9451.47LPS export ABC transporter permease LptF n=1 Tax=P... [more]
A0A7C7PWS8_9PROT7.520e-9449.54Lipopolysaccharide export system permease protein ... [more]
A0A2E9WUE9_9PROT1.540e-9348.69Lipopolysaccharide export system permease protein ... [more]
A0A2D6T406_9PROT4.440e-9349.69Lipopolysaccharide export system permease protein ... [more]
A0A6N7F815_9PROT8.050e-9348.63Lipopolysaccharide export system permease protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13324contigP-wetherbeei_contig13324:3..1857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1089552.KI911559_gene3644
PFAMsYjgP_YjgQ
Model size1855
Max annot lvl204441|Rhodospirillales
KEGG koko:K07091
KEGG TC1.B.42.1
KEGG Pathwayko02010,map02010
KEGG ModuleM00320
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.33e-81
EggNOG OGsCOG0795@1|root,COG0795@2|Bacteria,1MUF2@1224|Proteobacteria,2TQUB@28211|Alphaproteobacteria,2JP9K@204441|Rhodospirillales
DescriptionPredicted permease YjgP/YjgQ family
Cds size966
COG categoryS
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185981.384901-UTR-P-wetherbeei_contig13324:2..621683185981.384901-UTR-P-wetherbeei_contig13324:2..62Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13324 3..62 +
1683185981.4038424-UTR-P-wetherbeei_contig13324:1028..18571683185981.4038424-UTR-P-wetherbeei_contig13324:1028..1857Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13324 1029..1857 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185981.3966033-CDS-P-wetherbeei_contig13324:62..10281683185981.3966033-CDS-P-wetherbeei_contig13324:62..1028Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13324 63..1028 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13324.1.1prot_P-wetherbeei_contig13324.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13324 63..1028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13324.1.1

>prot_P-wetherbeei_contig13324.1.1 ID=prot_P-wetherbeei_contig13324.1.1|Name=mRNA_P-wetherbeei_contig13324.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp
MPNFLSLVAPIALFVSTLFVYNRLTIDSELVVMRAVGFGPGQLARPAILL
GLLATLFGYLLSLYLVPLSFGQFKELHSDVRADYSGLLLQEGAFTNIGTS
LTVYVRARESNGDLRGILVHDSRDPASPITLLAERGTLAMTDDGPRVILL
NGNRQQVDRAAGKLSLLYFDRYSVEIGQTAQTREFRWREPGERYIDELLW
PDFSESNDRQFAPRLIAEGHTRLSAPLYALALVLVGLACLLPGDFNRRGL
GQRLLFAAACGLGVETLSIAIPNLAVRIPALIPFLYAIPLSLMALAAWAL
TNPGLRRRRPATDEAPSAAAG*
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mRNA from alignment at P-wetherbeei_contig13324:3..1857+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13324.1.1 ID=mRNA_P-wetherbeei_contig13324.1.1|Name=mRNA_P-wetherbeei_contig13324.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1855bp|location=Sequence derived from alignment at P-wetherbeei_contig13324:3..1857+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCTGATCGTCAATCGCGGGCTCGGCCTCGGCGCGTTCTTCTACCTGAC GATCCTGCTGATGCCGAACTTCCTGTCGCTCGTCGCACCGATCGCTTTGT TCGTCTCGACCCTCTTCGTCTACAACCGCCTGACGATCGACAGCGAGCTC GTGGTCATGCGCGCGGTCGGGTTCGGACCCGGCCAGCTCGCGCGCCCGGC GATCCTGCTGGGCCTGCTCGCCACGCTTTTCGGCTACCTGCTGTCGCTCT ATCTCGTTCCGCTGTCCTTCGGCCAGTTCAAGGAACTGCATTCCGACGTG CGCGCCGACTATTCGGGGCTCCTGCTCCAGGAGGGTGCGTTCACGAACAT CGGCACCAGCCTGACCGTCTATGTCCGCGCGCGAGAGAGTAACGGCGACC TGCGCGGCATCCTCGTTCACGATTCGCGCGATCCGGCGAGCCCGATCACG CTGCTCGCCGAGCGCGGCACGCTGGCGATGACCGACGACGGACCGCGCGT CATCCTGCTCAACGGCAACCGCCAGCAGGTCGACCGCGCGGCCGGCAAGC TGTCGCTGCTCTATTTCGACCGCTATTCGGTCGAGATCGGCCAGACGGCG CAGACGCGCGAGTTCCGTTGGCGCGAACCAGGCGAGCGCTACATCGACGA GCTCCTGTGGCCCGACTTCAGCGAATCCAACGACCGGCAGTTCGCGCCTC GCCTGATCGCCGAAGGCCACACGCGCCTGTCGGCCCCGCTCTATGCACTC GCACTCGTGCTGGTCGGCCTCGCCTGCCTGCTGCCGGGCGATTTCAACCG GCGTGGGCTCGGCCAGCGTCTCCTTTTCGCGGCCGCCTGCGGCCTCGGGG TCGAAACGCTGTCGATCGCGATCCCGAATCTCGCGGTGCGCATTCCCGCT CTCATCCCGTTCCTCTACGCAATACCGCTGTCCTTGATGGCGCTGGCGGC GTGGGCCCTGACCAATCCCGGCCTGCGTCGCCGGCGCCCGGCGACGGACG AAGCGCCGTCCGCGGCGGCAGGATAGGCCCGCGATGCGCCTGTCATCGAC GCTGCTCGGCTATATCGGGCGCCAGTTCGCGATAGCCCTCGTCGCGTTCC TCGTCGTCTTTCTGGCGATCGTCTACATGTTCGACACGATCGAGCTGCTG CGCCGGGCGGCCGGACGGCCGAACATCTCGACGCAGATCGTCCTGCGCAT GGCGCTGTTCAAGCTGCCGCAGATGGCCGAAGAACTCGCGCCGTTCGTCG TGCTGTTTGCGGCGATGATCACGTTCTGGCGCCTGACGCGCACCCACGAA CTTACTGTGGCGCGCGCGGCCGGCGTCTCGGTCTGGCAGTTCCTGCTGCC GGTGATCGGCTTTGCGGTGCTGTTCGGCGGTTTCAAGGTGACGGTGCTCA ATCCGGCGGCGGCGGTGCTCTACGGGCATTTCGAACGCCTCGAAGCCCAG TTGATGCGCGGCGGGTCGAGCCTGCTGGCGGTATCCGACAGCGGTTTCTG GCTGCGCCAGATCGACGCGAACGGCAATTCGGTCGTCTATGCGCGCCGCG TGGCGTCGCAGGAGATGCAGCTGTTCGACGTGATCATCCTGAACTTCGAA GGACAGGACAAGTTCATCGGCCGCGTCGATGCGGCGAGTGCTCGCCTGGA TGCCGGCAACTGGCTCGTGACCGACGCCTGGCTGACCGCCCCCGAACGCC CCGCCCGTTTCGAGGCCAGTTTCCGCATCCCGACCGCGATGACGGCCGAA CAGATCCAGGATTCGTTCGCGTCGCCGCTGACGATCTCGTTCTGGGAACT GCCCGGCTTCATCCGCATGCTCGAGACGGCGGGATTCTCGGCGACGCGCC ACCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13324:3..1857+

>mRNA_P-wetherbeei_contig13324.1.1 ID=mRNA_P-wetherbeei_contig13324.1.1|Name=mRNA_P-wetherbeei_contig13324.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=966bp|location=Sequence derived from alignment at P-wetherbeei_contig13324:3..1857+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAACTTCCTGTCGCTCGTCGCACCGATCGCTTTGTTCGTCTCGAC
CCTCTTCGTCTACAACCGCCTGACGATCGACAGCGAGCTCGTGGTCATGC
GCGCGGTCGGGTTCGGACCCGGCCAGCTCGCGCGCCCGGCGATCCTGCTG
GGCCTGCTCGCCACGCTTTTCGGCTACCTGCTGTCGCTCTATCTCGTTCC
GCTGTCCTTCGGCCAGTTCAAGGAACTGCATTCCGACGTGCGCGCCGACT
ATTCGGGGCTCCTGCTCCAGGAGGGTGCGTTCACGAACATCGGCACCAGC
CTGACCGTCTATGTCCGCGCGCGAGAGAGTAACGGCGACCTGCGCGGCAT
CCTCGTTCACGATTCGCGCGATCCGGCGAGCCCGATCACGCTGCTCGCCG
AGCGCGGCACGCTGGCGATGACCGACGACGGACCGCGCGTCATCCTGCTC
AACGGCAACCGCCAGCAGGTCGACCGCGCGGCCGGCAAGCTGTCGCTGCT
CTATTTCGACCGCTATTCGGTCGAGATCGGCCAGACGGCGCAGACGCGCG
AGTTCCGTTGGCGCGAACCAGGCGAGCGCTACATCGACGAGCTCCTGTGG
CCCGACTTCAGCGAATCCAACGACCGGCAGTTCGCGCCTCGCCTGATCGC
CGAAGGCCACACGCGCCTGTCGGCCCCGCTCTATGCACTCGCACTCGTGC
TGGTCGGCCTCGCCTGCCTGCTGCCGGGCGATTTCAACCGGCGTGGGCTC
GGCCAGCGTCTCCTTTTCGCGGCCGCCTGCGGCCTCGGGGTCGAAACGCT
GTCGATCGCGATCCCGAATCTCGCGGTGCGCATTCCCGCTCTCATCCCGT
TCCTCTACGCAATACCGCTGTCCTTGATGGCGCTGGCGGCGTGGGCCCTG
ACCAATCCCGGCCTGCGTCGCCGGCGCCCGGCGACGGACGAAGCGCCGTC
CGCGGCGGCAGGATAG
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