mRNA_P-wetherbeei_contig133.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: D8LD81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD81_ECTSI) HSP 1 Score: 223 bits (569), Expect = 2.940e-61 Identity = 125/257 (48.64%), Postives = 163/257 (63.42%), Query Frame = 1
Query: 190 YMELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEAAVEAAVSAVAGPGTVSAAAVPCYQVLNVVTYAVFDLAHLALEEYAEKVDTGKVQAELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRVLEPVPVVLARSPGLVRQILCWHFAHCVMFVY---GVYRKKEYEQLRQVYNAAVA--------ATAGTPQFRDAHPFPPINQLQRHG-ALLCANPLCRVM 924
YME AKAVA QLPQ T+D ELVFQFYRV +EVH L+ TP LLQ + AA PCYQVLNV+TYA++DLAHLA EE + +V AEL LLP+L RA+ +S++N SFGALG VLVK L Y LLRLGR ++ L VLEPV +LA +PGL+RQ++CWH +HC++ ++ G + KEYE R +YN+ + A G F+DA PFPP++ L G + LC+NP+C+ +
Sbjct: 219 YMEFAKAVATQLPQVTVDHELVFQFYRVCSEVHNCTLSATPKLLQH---------------------AGAAAPCYQVLNVLTYALYDLAHLAAEELTNTISKAQVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWF--KEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAI 452
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: A0A6H5K8W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W2_9PHAE) HSP 1 Score: 216 bits (551), Expect = 3.940e-61 Identity = 125/260 (48.08%), Postives = 161/260 (61.92%), Query Frame = 1
Query: 190 YMELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEAAVEAAVSAVAGPGTVSAAAVPCYQVLNVVTYAVFDLAHLALEEYAE---KVDTGKVQAELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRVLEPVPVVLARSPGLVRQILCWHFAHCVMFVY---GVYRKKEYEQLRQVYNAAVA--------ATAGTPQFRDAHPFPPINQLQRHG-ALLCANPLCRVM 924
YME AKAVA QLPQ T+D ELVFQFYRV +EVH L+ TP LLQ + AA PCYQVLNV+TYA++DLAHLA E+ K V AEL LLP+L RA+ +SQ+N SFGALG VLVK L Y LLRLGR ++ L VLEPV +LA +PGL+RQ++CWH +HC++ ++ G + EYE R +YN+ + A G F+DA PFPP++ L G + LC+NP+C+ +
Sbjct: 129 YMEFAKAVATQLPQVTVDHELVFQFYRVCSEVHNCTLSATPKLLQH---------------------AGAAAPCYQVLNVLTYALYDLAHLAAEKLTNTISKAQANLVMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFN--EYEITRNIYNSLLEPEQGGGHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAI 365
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: D8LD86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD86_ECTSI) HSP 1 Score: 218 bits (555), Expect = 3.590e-59 Identity = 123/257 (47.86%), Postives = 161/257 (62.65%), Query Frame = 1
Query: 190 YMELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEAAVEAAVSAVAGPGTVSAAAVPCYQVLNVVTYAVFDLAHLALEEYAEKVDTGKVQAELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRVLEPVPVVLARSPGLVRQILCWHFAHCVMFVY---GVYRKKEYEQLRQVYNAAVA--------ATAGTPQFRDAHPFPPINQLQRHG-ALLCANPLCRVM 924
YME AKAVA QLPQ T+D ELVFQFYRV +EVH L+ P LLQ + AA PCYQVLNV+TYA++DLAHLA EE + +V AEL LLP+L RA+ +S++N SFGALG VLVK L Y LLRLGR ++ L VLEPV +LA +PGL+RQ++CWH + C++ ++ G + KEYE R +YN+ + A G F+DA PFPP++ L G + LC+NP+C+ +
Sbjct: 221 YMEFAKAVATQLPQVTVDHELVFQFYRVCSEVHNCTLSAIPKLLQH---------------------AGAAAPCYQVLNVLTYALYDLAHLAAEELTNTISKAQVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILVIFLEHGWF--KEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAI 454
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: A0A6H5K9S8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S8_9PHAE) HSP 1 Score: 172 bits (435), Expect = 5.710e-44 Identity = 99/203 (48.77%), Postives = 124/203 (61.08%), Query Frame = 1
Query: 190 YMELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEAAVEAAVSAVAGPGTVSAAAVPCYQ----------VLNVVTYAVFDLAHLALEEYAEKVDTGK-------VQAELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRVLEPVPVVLARSPGLVRQILCWHFAHCVM 747
YME A+AVA QLPQ T+D ELVFQFYRV +EVH L+ TP LLQ + AA PCYQ VLNV+TYA++DLAHLA EE + + V AEL LLP+L RA+ +S++N SFG LG VLVK L Y LLRLGR ++ L VLEPV +LA +PGL+RQ++CWH +HC++
Sbjct: 241 YMEFAEAVATQLPQVTVDHELVFQFYRVCSEVHNCTLSATPKLLQH---------------------AGAAAPCYQARSLESVRFMVLNVLTYALYDLAHLAAEELTNTISKAQASTMAFAVMAELNSLLPILTRADGMSRDNSSSFGTLGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCIL 422
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: A0A6H5JUV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV1_9PHAE) HSP 1 Score: 139 bits (350), Expect = 8.990e-35 Identity = 85/164 (51.83%), Postives = 100/164 (60.98%), Query Frame = 1
Query: 193 MELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEAAVEAAVSAVAGPGTVSAAAVPCYQVLNVVTYAVFDLAHLALEEYAEKVDTGK-------VQAELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRV 663
ME AKAVA QLPQ T+D ELVFQFYRV +EVH L+ TP LLQ + AA PCYQVLNV+TYA++DLAHLA EE + + V AEL LLP+L RA+ +SQ+N SFGALG VLVK L Y LLRLGR ++ L V
Sbjct: 1 MEFAKAVATQLPQVTVDHELVFQFYRVCSEVHNCTLSATPKLLQH---------------------AGAAAPCYQVLNVLTYALYDLAHLAAEELTNTISKAQASTMAFAVMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 143
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: D7FNW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW6_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 6.370e-21 Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 508 AELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALRVLEPVPVVLARSPGLVRQILCWHFAHCVM 747
AEL LLP+L RA+ +S++N SFGALG VLVK L Y LLRLGR ++ L VLEPV +LA +PGL+RQ++CWH + C++
Sbjct: 2 AELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCIL 81
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Match: A0A6H5JWQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ9_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 1.380e-14 Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 508 AELLGLLPVLVRANKISQENGLSFGALGAVLVKSSLGYALLRLGRVEEALR----------VLEPVPVVLARSPGLVRQILCWHFAHCVMFV 753
AEL LLP+L RA+ S++N SFGALG VLV L LLRLG VLEPV +LA +PGL+RQ++CWH +HC++ V
Sbjct: 2 AELNSLLPILTRADGRSRDNSSSFGALGVVLVNGVLASILLRLGLSVSTTSWMRNGLGNVWVLEPVVGILAETPGLLRQVMCWHLSHCILSV 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig133.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig133.1.1 >prot_P-wetherbeei_contig133.1.1 ID=prot_P-wetherbeei_contig133.1.1|Name=mRNA_P-wetherbeei_contig133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp MELAKAVAFQLPQTTLDSELVFQFYRVGAEVHANALTTTPLLLQQQAEAEback to top mRNA from alignment at P-wetherbeei_contig133:22..3298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig133.1.1 ID=mRNA_P-wetherbeei_contig133.1.1|Name=mRNA_P-wetherbeei_contig133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3277bp|location=Sequence derived from alignment at P-wetherbeei_contig133:22..3298+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig133:22..3298+ >mRNA_P-wetherbeei_contig133.1.1 ID=mRNA_P-wetherbeei_contig133.1.1|Name=mRNA_P-wetherbeei_contig133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig133:22..3298+ (Phaeothamnion wetherbeei SAG_119_79)back to top |