mRNA_P-wetherbeei_contig132.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.640e-56 Identity = 99/151 (65.56%), Postives = 122/151 (80.79%), Query Frame = 2 Query: 584 LHMSDVFASSSDVLADLEELDAVLGDEREDADLEPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKSKVGV 1036 L MSD +SDVLADLE LD + D++ED+DLEPRQPYLNRLAMQAA+R WQR E DSGSAEVQ AI+TERIIY+TKHLQ HPKD HSRRGL+ +VN RR +NYLFE E + +DL +LGIRF+P S ++RE+KY++FK+ KSK+G+ Sbjct: 73 LRMSD----ASDVLADLEALDNAMSDDKEDSDLEPRQPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGM 219
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.120e-52 Identity = 98/151 (64.90%), Postives = 126/151 (83.44%), Query Frame = 2 Query: 584 LHMSDVFASSSDVLADLEELDAVLGDEREDADLEPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKSKVGV 1036 L MSD S+SDVLADLE LD+VL +++EDADLEPRQPYLNRLAMQAA+R WQR + DSGSAEVQ AI+TERIIY+TKH+Q HPKD HSRRGL+ +VNKRR +N+LFE + + ++L +LGIRF+P S ++RE+KY++FK+ KSK+G+ Sbjct: 43 LRMSD---SASDVLADLEALDSVLSEDKEDADLEPRQPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGM 190
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI) HSP 1 Score: 166 bits (419), Expect = 4.890e-45 Identity = 86/155 (55.48%), Postives = 122/155 (78.71%), Query Frame = 2 Query: 590 MSDVFAS-SSDVLADLEELDAVLGDEREDA-DLEPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKSKVGVAIRS 1048 MS + AS ++DVLADL+ELD+V+G E +D DL+P+Q YLN+LA QAAQ +W+++++D+GS + AILTE+I+Y+TKH+QQHP D HSRRGL+TMVNKRR +NY F+ E + +++ TLGIRFRP +K RE++YAA+ + KSK+G A R+ Sbjct: 57 MSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRT 211
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.550e-27 Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 617 DVLADLEELDAVLGDEREDADLEPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKSK 1027 D + + ELDA ED + EP Y + +++ +++W R E DSGS E Q A +TERI+Y+TKH+QQ+PKD +RRGL+ +VNKRR ++NYLF K V++ +LGIR + P + TREE Y F K K Sbjct: 19 DYILESNELDA-----SEDTESEPSSSYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A7S1XRX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX6_9STRA) HSP 1 Score: 111 bits (277), Expect = 7.960e-25 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 698 YLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNK 1021 + N+ A+ AA ++++HEKD+GSAE Q A L+ RI YMT+H ++HPKD HSRRGL+TMVNKRR ++NYL +T+ + LGIRF+ + TR E+YAAFK K Sbjct: 107 WSNKQAINAATEKFKKHEKDTGSAEFQIAKLSARITYMTEHAKRHPKDHHSRRGLITMVNKRRRLLNYLNKTDPEAVERITSELGIRFKAAGRIMTRAERYAAFKPRK 214
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.670e-24 Identity = 56/116 (48.28%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 677 DLEPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKS 1024 D EP + ++ M + W+R EKD+GS E Q A +TERI Y+TKHLQQ+PKD +RRGLV +VNKRR ++NYL + K D+ +LGIR + P + E+RE+KY F KS Sbjct: 62 DGEPPAWFTSQQRMDELRSTWRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A7S4AFF2_9STRA (30S ribosomal protein S15 n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFF2_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.780e-24 Identity = 66/155 (42.58%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 593 SDVFASSSDVLADLE---ELDAVL--GDEREDADL------EPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKS 1024 S +F D+ D+E E D ++ GD EDAD EP + ++ ++ + +RH+ D+GS E Q A +TERI Y+TKHLQQHPKD +RRGLV MVNKRR ++NYL++ + + V + ++LG+R +PP +Y+ REEKYA++ K+ Sbjct: 33 SAIFVGDDDMDDDIESPPEEDYIVNVGDIEEDADDGIEDDGEPPAWFESKKRIKELRDSVRRHDNDTGSPEFQVAGMTERISYLTKHLQQHPKDFSTRRGLVAMVNKRRRLLNYLYQEDQERYVAVVQSLGVRHKPPGRYD-REEKYASYPKQKA 186
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A7R9YE60_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE60_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.450e-23 Identity = 52/106 (49.06%), Postives = 76/106 (71.70%), Query Frame = 2 Query: 704 NRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNK 1021 N++A+ +++RHE DSGSAE Q A +TERI Y+T+H ++HPKD HSRRGL+ +V+KR+ ++NYL + + L + LGIRF+P + TR EKY+AFK+ K Sbjct: 122 NKMAVTETSSKYKRHETDSGSAEFQVATMTERIKYLTEHARRHPKDNHSRRGLIALVSKRKRLLNYLTKEKPEVVEPLCKDLGIRFKPAGRIMTRAEKYSAFKARK 227
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH) HSP 1 Score: 105 bits (262), Expect = 1.590e-23 Identity = 53/116 (45.69%), Postives = 79/116 (68.10%), Query Frame = 2 Query: 704 NRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKSKVGVAIRSV 1051 NR A+ AA +W+R E+D+GS EVQ A++TERI Y+T HL +HP+D ++RGL +VN RR+ +N+L + KA + LGIR++PP + +E KY+AFK+ K+K A + V Sbjct: 4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKKLV 119
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Match: A0A448ZCK9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCK9_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.360e-23 Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 653 LGDEREDADL------EPRQPYLNRLAMQAAQRRWQRHEKDSGSAEVQAAILTERIIYMTKHLQQHPKDVHSRRGLVTMVNKRRHVMNYLFETEGTKAVDLARTLGIRFRPPSKYETREEKYAAFKSNKS 1024 +GD EDAD +P Y ++ ++ + +RH+ D+GS E Q A +TERI Y+TKHLQQHPKD +RRGLV MVNKRR ++NYLF+ + + V + ++LGIR +PP +Y+ REE+Y+++ K+ Sbjct: 70 VGDIEEDADDGTEDDGQPPAWYESQQRLEKMRADVRRHDNDTGSPEFQVAGMTERISYLTKHLQQHPKDFSTRRGLVAMVNKRRRLLNYLFKEDQDRYVAVVQSLGIRHKPPGRYD-REEQYSSYPKQKA 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig132.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig132.8.1 >prot_P-wetherbeei_contig132.8.1 ID=prot_P-wetherbeei_contig132.8.1|Name=mRNA_P-wetherbeei_contig132.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp MLHMSDVFASSSDVLADLEELDAVLGDEREDADLEPRQPYLNRLAMQAAQback to top mRNA from alignment at P-wetherbeei_contig132:10622..12319+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig132.8.1 ID=mRNA_P-wetherbeei_contig132.8.1|Name=mRNA_P-wetherbeei_contig132.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1698bp|location=Sequence derived from alignment at P-wetherbeei_contig132:10622..12319+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig132:10622..12319+ >mRNA_P-wetherbeei_contig132.8.1 ID=mRNA_P-wetherbeei_contig132.8.1|Name=mRNA_P-wetherbeei_contig132.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig132:10622..12319+ (Phaeothamnion wetherbeei SAG_119_79)back to top |