mRNA_P-wetherbeei_contig13194.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: D8LF99_ECTSI (Protein for assembly of pre-ribosomal particles containing 18S rRNA n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF99_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.960e-70 Identity = 115/194 (59.28%), Postives = 149/194 (76.80%), Query Frame = 1 Query: 913 GTAAAESAEGTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRP-SFGEGG 1491 G A +E +K+++RGLPW+T D++V FF CGKIV+++QP + DGRSSG A + F+++AAAA A+ +DG G RWLKI M+ ++P + G PK KP GCTTVFIGNLS+ IDE+T++ FGECGDIK +RFAEDRETG+F+GFGHVEFYD DAA+ LA ++V+GRPI+VDYAAPR PR SFG GG Sbjct: 272 GDAKKAKSENSKIYLRGLPWDTSDDDVKDFFKACGKIVTVEQPKNPDGRSSGTAYVTFDSAAAAAKAIELDGQELGGRWLKIMMSFEKPDHARNGEPKVKPAGCTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANSDVMGRPIRVDYAAPRAPRDDSFGGGG 465
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A835ZAT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT4_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.740e-64 Identity = 110/186 (59.14%), Postives = 135/186 (72.58%), Query Frame = 1 Query: 940 GTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAP--KEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFGEGG 1491 GTK++VRGLPW+ +EEV FF ECG+I S D P H+GR+SG A + F S AA + RWLKI +AT+R A+ + GAP K+KPEGCTTVFIGNLS+D+DE+ V+ FGECG+I +RFA DRETG FKGFGHVEF D DAA+ +AGTE+ GRP++VDYAAPR PR SFG GG Sbjct: 99 GTKIYVRGLPWSATEEEVRDFFKECGEIESCDLPTDHNGRASGTAFVVFADSDAANKS--------RERWLKIVLATERAARPSFGAPDKKDKPEGCTTVFIGNLSWDVDEDAVRAAFGECGEIASVRFATDRETGDFKGFGHVEFVDGEGVDAAIDMAGTEIAGRPVRVDYAAPRAPRESFGGGG 276
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A1Z5KL43_FISSO (Nucleolin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL43_FISSO) HSP 1 Score: 214 bits (544), Expect = 2.130e-59 Identity = 99/175 (56.57%), Postives = 129/175 (73.71%), Query Frame = 1 Query: 928 ESAEGTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYA 1452 E+ EG KV+VRGLPW + EV FFA CG I S + PL DGRSSG A IEFET+ AAAA+ ++G F RWL I +T +P SA P +K +GC TVF+GNL++D+DE+T++ FGECG+I +RFA DRETG+FKGFGH+EF DT TD A+A+AGT+++GR ++VDYA Sbjct: 270 EATEGNKVYVRGLPWKAEEHEVQEFFAACGPIKSCEMPLMDDGRSSGTAIIEFETNEGAAAAIELNGGDFQGRWLSIKYSTPKPILSAR-EPTQKQDGCVTVFVGNLAWDVDEDTLRQAFGECGEITSVRFATDRETGEFKGFGHIEFTDTEATDKAIAMAGTDILGRQVRVDYA 443
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S2V571_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V571_9STRA) HSP 1 Score: 207 bits (527), Expect = 3.460e-57 Identity = 98/183 (53.55%), Postives = 135/183 (73.77%), Query Frame = 1 Query: 946 KVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFGEGGG 1494 KVF++GLPW T + ++ FF G I S+DQPL+ DGR+SG A + F+++ +A A+ +DG T G RW+K+ +A D P G EKPEGC TVFIGNLS+DIDE+TV+ FG+CGDIK +RFAEDRETG+F+GFG+V+FYD + TD A+ L G++++GR +++DY+APR FG GGG Sbjct: 312 KVFMKGLPWETEEYQIKDFFKGIGTIESIDQPLNKDGRASGTAYVVFDSTESAEKALELDGGTVGERWVKLILARDIPPPPKPG---EKPEGCDTVFIGNLSWDIDEDTVRQTFGDCGDIKSVRFAEDRETGRFRGFGYVQFYDGDATDEAMKLNGSDLMGREVRIDYSAPR----GFGGGGG 487
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S3Q248_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q248_9STRA) HSP 1 Score: 205 bits (522), Expect = 6.140e-57 Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 1 Query: 922 AAESAEGTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAA 1455 A + G K+++RGLPW D+E+ +FA CG+IVS + PL DGRSSG A IEF T A +A++G FG RWL I A+D+PA +A EKP C TVF GNLS+++DE+T++ F ECG+I IRFA DRETG+FKGFGH+EF+ ++ TDAA+A+AGT+++GR ++VDYAA Sbjct: 199 ADDDGAGKKMYIRGLPWRATDDELREYFASCGEIVSCELPLQSDGRSSGTAEIEFSTKDACEKCMALNGEDFGGRWLSIKYASDKPAFAARET-SEKPPDCKTVFCGNLSWNVDEDTLRETFAECGEISSIRFATDRETGEFKGFGHIEFFSSDSTDAAIAMAGTDIMGRAVRVDYAA 375
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S2RIH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIH6_9STRA) HSP 1 Score: 201 bits (511), Expect = 6.870e-56 Identity = 93/181 (51.38%), Postives = 133/181 (73.48%), Query Frame = 1 Query: 919 AAAESAEGTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPR 1461 A ++ +K+F+RGLPW ++E+ F CG+I ++QP++ DGRSSG A I F ++++A +AV M+G FG RWL I +A D+P ++ AP EKPEGC T+FIGNLS+ IDE++V+ F ECG+I +RFAED+ETG F+GFGHVEF +T+ T AVA+AGT+++GR ++VDYA R Sbjct: 196 AVSDDGAKSKIFIRGLPWRASEDEIREHFGGCGEIKEVEQPMNSDGRSSGTALIVFGSASSAESAVEMNGGDFGGRWLDIKLADDKPIQTER-APSEKPEGCLTIFIGNLSWQIDEDSVREAFQECGEITTVRFAEDKETGDFRGFGHVEFANTDSTTQAVAMAGTDIMGRAVRVDYAQDR 375
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S3UY59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY59_HETAK) HSP 1 Score: 203 bits (517), Expect = 2.220e-55 Identity = 100/186 (53.76%), Postives = 127/186 (68.28%), Query Frame = 1 Query: 940 GTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFGEGGGG 1497 G ++FV+GLPW D+EV FF +CG I+ D P H+GR+SG A + F T A +DGATFG RWLKI A +RPA + G E+PEGC TVF GNLS+DIDEE+++ F +CGDI +RFAEDRETG+F+GFG+V FYD CTD A+ L G V GR I++DY+APR+ GGGG Sbjct: 330 GFRIFVKGLPWAATDDEVKEFFKDCGTILDCDMPKDHNGRASGTAYVSFSTDDERNKAYELDGATFGERWLKIEEARERPAAAKPG---ERPEGCDTVFCGNLSWDIDEESLREFFKDCGDISSVRFAEDRETGKFRGFGYVSFYDGACTDEAMKLTGQVVAGREIRLDYSAPRDR-----SGGGG 507
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S2PQL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQL4_9STRA) HSP 1 Score: 199 bits (505), Expect = 9.860e-55 Identity = 102/188 (54.26%), Postives = 130/188 (69.15%), Query Frame = 1 Query: 937 EGTKVFVRGLPWNTPDEEVSTFFAECGK-IVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFGEGGGG 1497 EGT VFVRGLPW +EEV FF +CG S+D PL H GRSSG A I+F T+ AAA+ +D ATFG RWL I +P+ + KPEGCTTVF+GNLSF +DE++V+ FG+CG+IK IRF+ DRETG+FKGFGHVEFYD++ + AV L G ++ R +++DYA + PR SFG GG Sbjct: 179 EGTTVFVRGLPWKATEEEVRDFFKDCGNGCKSIDMPLDHSGRSSGTAIIDFGTAEGTAAALELDQATFGERWLSI-----KPSSVSA-----KPEGCTTVFVGNLSFQVDEDSVREFFGQCGEIKDIRFSMDRETGEFKGFGHVEFYDSDSAENAVKLVGQVLMDRALRIDYARSK-PRESFGGNEGG 355
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: K0RJJ6_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJJ6_THAOC) HSP 1 Score: 197 bits (501), Expect = 3.190e-51 Identity = 105/219 (47.95%), Postives = 135/219 (61.64%), Query Frame = 1 Query: 922 AAESAEGTKVFVRGLPWNTPDEEVSTFFAECGKIVSLDQPLSHDGRSSG----------------------------MANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFGEGGG 1494 A +S KV+VRGLPW ++E+ +FAECG+I ++D PL DGRSSG A IEF + +A+A+ +GA FG RWL I +T RP A AP +K EGC TVF+GN+SF IDE+TV+ F +CG+I IRFAED+ETG FKG+GHVEF ++ TD AVALAGT V+ RPI+VD+A R+ R S G G G Sbjct: 569 ALDSESNCKVYVRGLPWRATEDEIKEYFAECGEIKNVDMPLQDDGRSSGTGEFTAREAAVLIAFFFQTKPFAPILSRQAIIEFSDPSGSASALRHNGADFGGRWLNIKYSTSRPITEAR-APSQKEEGCVTVFVGNMSFHIDEDTVRETFKDCGEIASIRFAEDKETGVFKGYGHVEFVESKATDRAVALAGTYVMNRPIRVDFANERKGRSSSGGGXG 786
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Match: A0A7S1DDH5_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDH5_CYCTE) HSP 1 Score: 182 bits (461), Expect = 3.850e-51 Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 1 Query: 967 PWNTPDEEVSTFFAE-CGK---IVSLDQPLSHDGRSSGMANIEFETSAAAAAAVAMDGATFGARWLKICMATDRPAKSATGAPKEKPEGCTTVFIGNLSFDIDEETVKNLFGECGDIKRIRFAEDRETGQFKGFGHVEFYDTNCTDAAVALAGTEVIGRPIKVDYAAPREPRPSFG 1482 PW +EEV +FA CG I++ + PL +DGRSSG A IEF + AAA AV ++G F RWL I +T +P A P +K +GC TVF+GNLS++IDE+T+K +FGECG+IK +RFA D+ET FKG+GH+EFY+T TD A+ LAGT+++GRP++VDYA R R SFG Sbjct: 1 PWRASEEEVREYFASSCGGVECILTCELPLMNDGRSSGTAIIEFASVEAAAKAVELNGEDFQGRWLNIKYSTPKPIM-APREPTQKQDGCVTVFVGNLSWNIDEDTLKEVFGECGEIKMVRFATDKETEDFKGYGHIEFYETEATDKAMELAGTDIMGRPVRVDYANDR--RKSFG 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13194.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13194.1.1 >prot_P-wetherbeei_contig13194.1.1 ID=prot_P-wetherbeei_contig13194.1.1|Name=mRNA_P-wetherbeei_contig13194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=520bp MGKVKKEKKEEAAAAAPVAAKPTVAKAAKKSKVVAAPAPKAEKSKSSKKAback to top mRNA from alignment at P-wetherbeei_contig13194:316..1875+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13194.1.1 ID=mRNA_P-wetherbeei_contig13194.1.1|Name=mRNA_P-wetherbeei_contig13194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1560bp|location=Sequence derived from alignment at P-wetherbeei_contig13194:316..1875+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13194:316..1875+ >mRNA_P-wetherbeei_contig13194.1.1 ID=mRNA_P-wetherbeei_contig13194.1.1|Name=mRNA_P-wetherbeei_contig13194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1560bp|location=Sequence derived from alignment at P-wetherbeei_contig13194:316..1875+ (Phaeothamnion wetherbeei SAG_119_79)back to top |