mRNA_P-wetherbeei_contig13165.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: UPI000B30753E (nuclear transport factor 2 family protein n=1 Tax=Endozoicomonas atrinae TaxID=1333660 RepID=UPI000B30753E) HSP 1 Score: 129 bits (323), Expect = 7.630e-36 Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 22 MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 M+ ++L +L+ F+++FN N+LD VM++F E A+Y+E GR ++G AIR A PQF G FG +QF+++D F+DA SGK+M SW ++ G P GLDLLHF GD +V+K TY K+K+P Sbjct: 1 MNTSRQQLIELTYKFMESFNTNNLDDVMAFFSEGAIYDEFNGRRNEGKDAIRRALEPQFSGNFGVMQFLDEDLFVDADSGKVMVSWQCKLELKGQPVFWHGLDLLHFNGDTVVQKLTYAKSKAP 124
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A3D5DCR0_9GAMM (SnoaL-like domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCR0_9GAMM) HSP 1 Score: 128 bits (321), Expect = 1.580e-35 Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 22 MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSPHY 399 M+ R+ EL L+ FL AFNR D+D +M +F EDAVYEE G+V++G A IR +F F G+FG I F EDDTFIDA + K+MSSW + +D D P ++ GLDLL+F KI RK T+VK K+ Y Sbjct: 2 MNRRHDELKQLTDEFLGAFNRADVDGIMMFFAEDAVYEEFHGKVNEGKAEIRKSFEGLFGGRFGTICFHEDDTFIDADASKVMSSWKLHLDMDRKPVVLYGLDLLYFEERKITRKLTFVKAKAGLY 127
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A081K9V7_9GAMM (SnoaL-like domain-containing protein n=1 Tax=Endozoicomonas elysicola TaxID=305900 RepID=A0A081K9V7_9GAMM) HSP 1 Score: 127 bits (319), Expect = 3.090e-35 Identity = 61/124 (49.19%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 22 MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 M+ + L DL+ F++AFN N+LD VM++F EDA+Y+E + ++G AIR PQF G+FG +QF+++D FIDA SGK+M SW ++ P RGLDLLHF GDK+V+K TY K+K P Sbjct: 1 MTTTRQHLIDLTFNFMEAFNTNNLDEVMTFFTEDAIYDEFNNKRNKGKEAIRRTLEPQFSGRFGVMQFLDEDLFIDAESGKVMVSWLCKLEVKDQPVSWRGLDLLHFNGDKVVQKLTYAKSKVP 124
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A6L8GHQ5_9BACT (Nuclear transport factor 2 family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GHQ5_9BACT) HSP 1 Score: 126 bits (316), Expect = 1.540e-34 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 37 RELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 R L +L+ F+ AFN NDLDAV++ F +D +Y+E G ++G AIR A PQF G++G ++FIEDD F+D +GK+M+SW T++ G P RGLDL++F GD +VRK TY K ++P Sbjct: 22 RRLAELTRRFVTAFNDNDLDAVLACFADDGIYDEFNGTRNRGRDAIRAALLPQFTGRYGTMRFIEDDLFVDPEAGKVMASWRCTLELKGQPTSWRGLDLMYFEGDALVRKSTYAKARAP 140
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A2V6XHX6_9BACT (SnoaL-like domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6XHX6_9BACT) HSP 1 Score: 122 bits (307), Expect = 1.980e-33 Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 40 ELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 +L L VAF DAFNR+DLD VMS+ +DAVY+E G V++GVAAIR AF PQF G +G ++F +D F+DA +GK + W T++ P RGLD++H +I +K TY K K+P Sbjct: 5 KLAKLFVAFTDAFNRDDLDGVMSFMADDAVYDEFNGTVNRGVAAIRDAFVPQFRGDYGKLRFHTEDLFVDAAAGKALIRWSCTLETKRGPAAWRGLDIVHVENGRITQKLTYAKAKAP 122
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A2V6Z0E8_9BACT (SnoaL-like domain-containing protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Z0E8_9BACT) HSP 1 Score: 122 bits (306), Expect = 2.810e-33 Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 40 ELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 +L DL + F AFNR+DLD VMS+ EDAVY+E TG +++G AAIR AF PQF G +G ++F +D F+DA +GK + W T++ P RGLD++H V +I K TY K K P Sbjct: 5 KLADLVIRFTQAFNRDDLDGVMSFMAEDAVYDEFTGTINRGSAAIRAAFVPQFRGDYGKMRFNTEDLFVDAATGKALIRWQCTLETKRGPAAWRGLDIIHVVNGRITEKLTYAKAKVP 122
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A2E6GK39_9PROT (SnoaL-like domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GK39_9PROT) HSP 1 Score: 122 bits (306), Expect = 5.680e-33 Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 1 LKPGACAMSDRYR---ELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 LK G M+D+ R EL L + F +AFNR ++D VMSYF E A+Y+E G ++G+ AIR AF PQF+G FG ++F +D F+D +GK M W +T++++ RGLDLLHF K+V K TY K K P Sbjct: 3 LKNGDAVMADQQRARAELEKLVIDFTEAFNRENIDEVMSYFAEGAIYDEFNGIRNEGLEAIRKAFEPQFDGAFGKMRFHTEDMFLDVDAGKAMIRWALTLEEETRAGAYRGLDLLHFRDGKLVEKHTYCKAKIP 136
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A2E7HKE1_9PROT (SnoaL-like domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HKE1_9PROT) HSP 1 Score: 121 bits (304), Expect = 5.820e-33 Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 22 MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSPHYT 402 M+DR +EL +L+ F+D FNR D+D + ++F ED VYE+ G G AAI+ AF P G G I F ++D F + S K+M+SW + ++ +G P +RGLDLLHF GDK+VRK Y K +P T Sbjct: 1 MTDRRKELEELTHQFVDCFNRQDIDGIAAFFAEDGVYEDSNGGSHTGPAAIKEAFVPLVCGSRGKISFDDEDFFAEPESDKVMASWTLNMEIEGKPMRLRGLDLLHFRGDKLVRKMAYCKAAAPQLT 127
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A6N9BIP2_9PROT (Nuclear transport factor 2 family protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N9BIP2_9PROT) HSP 1 Score: 121 bits (303), Expect = 8.260e-33 Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 40 ELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSPHYTAR 408 EL ++++ F DAFNR+DLD VM++F EDAVY+E G +G AIR AF P F GKFG ++F E+D F+ A GK M SW + RGLDLLH G +IV K TY KT P + AR Sbjct: 5 ELKEITLKFTDAFNRDDLDGVMAWFAEDAVYDEFHGARHEGKDAIRAAFEPMFAGKFGKVRFEEEDLFLAAEDGKAMISWSCVLTTPERSSAWRGLDLLHVEGGRIVAKHTYAKTARPLFEAR 127
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Match: A0A2E8YJF7_9GAMM (SnoaL-like domain-containing protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YJF7_9GAMM) HSP 1 Score: 121 bits (303), Expect = 1.320e-32 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 22 MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAIRTAFAPQFEGKFGPIQFIEDDTFIDAGSGKIMSSWDMTIDKDGTPQLMRGLDLLHFVGDKIVRKQTYVKTKSP 393 MSDR +EL L+ F+DAFNR LD V+SYF +DAVYE+ G G AIRTAF P G G I+F ++D F + + K+M+SW + ++ +G P MRG+D+L F GDK++ KQ Y K ++P Sbjct: 11 MSDRRKELEQLTHDFVDAFNRQSLDDVVSYFADDAVYEDSRGGSHTGSDAIRTAFTPLVGGAMGKIRFDDEDFFAEVETDKVMASWTLNMEVEGKPVSMRGMDILQFRGDKLILKQAYCKAQTP 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13165.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13165.2.1 >prot_P-wetherbeei_contig13165.2.1 ID=prot_P-wetherbeei_contig13165.2.1|Name=mRNA_P-wetherbeei_contig13165.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp MSDRYRELHDLSVAFLDAFNRNDLDAVMSYFREDAVYEELTGRVSQGVAAback to top mRNA from alignment at P-wetherbeei_contig13165:1000..1410+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13165.2.1 ID=mRNA_P-wetherbeei_contig13165.2.1|Name=mRNA_P-wetherbeei_contig13165.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig13165:1000..1410+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13165:1000..1410+ >mRNA_P-wetherbeei_contig13165.2.1 ID=mRNA_P-wetherbeei_contig13165.2.1|Name=mRNA_P-wetherbeei_contig13165.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig13165:1000..1410+ (Phaeothamnion wetherbeei SAG_119_79)back to top |