mRNA_P-wetherbeei_contig13163.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A7S2XW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW71_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.850e-57 Identity = 93/155 (60.00%), Postives = 115/155 (74.19%), Query Frame = 1 Query: 28 VFTAGRKLEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYRI-GTNTFIHSTLPGISKPKVVPLGDAAKDFIAATPAGPATSLPELLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEP 489 ++ GR+L D G+Y+I + DL+PAG+LI+AYNQ TS++Y LSPSE EL AGL R +DLK L +SI L + G TF+ S+L GI PKV+P G A FI + PAG T LPELL TALSELCKVKP GLDAV+WLG+WLL NNPNQP ++EP Sbjct: 6 LYVQGRQLSDGGMYIISVTDLDPAGVLIKAYNQVTSSEYYLSPSEDELEEAGLSRQKEDLKTLVESIDLTELSGGRTFLRSSLAGIKDPKVIPQGAEAAQFIKSIPAGTDT-LPELLTTALSELCKVKPSGLDAVRWLGQWLLENNPNQPQIEEP 159
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A836CDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.420e-53 Identity = 88/151 (58.28%), Postives = 111/151 (73.51%), Query Frame = 1 Query: 49 LEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYRIGTNTFIHSTLPGISKPKVVPLGDAAKDFIAATPAGPATSLPELLATALSELCKVKPQG---LDAVQWLGEWLLANNPNQPTVQEPD 492 L+D +Y IGIFD+EPAG++IRA N AT+ Y L P+E EL A L R++ DL RLA+S+ L +G TFI+S+LPGI KPK++P G+ AKDF+ SL +LL T LSELCKVKPQG +DAV+WLGEWLLANNPNQP V+EP+ Sbjct: 1 LQDGDMYTIGIFDMEPAGVVIRALNNATAKYYALGPTESELAAAKLGRNESDLARLAESVDLLEVGGTTFIYSSLPGICKPKIIPTGETAKDFMNGLTLRDG-SLVQLLTTGLSELCKVKPQGPGGIDAVRWLGEWLLANNPNQPAVEEPE 150
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A7S2WUZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUZ4_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.440e-52 Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 1 Query: 16 KAAAVFTAGRKLEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYRIGTNTFIHSTLPGISKPKVVPLGDAAKDFIAATPAGPATSLPELLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEPD 492 K AA++T GR+L D +Y+ ++DLEPAG+LIRAY +TS++ T SPSE EL A + R++ L +L DS + G + S L GI+KPK+VP GD + FI ATPAG T LPELL TAL+ELCK KP L+AV+WLG+WL+ NNPNQP V EP+ Sbjct: 11 KKAAIYTVGRQLNDGDMYIFSVYDLEPAGLLIRAYCASTSSELTTSPSESELYAASITRAEKHLAQLCDSYDIVTKGGTPLLESNLTGINKPKLVPQGDGVRQFITATPAGSET-LPELLTTALTELCKQKPAKLEAVRWLGQWLIDNNPNQPQVAEPE 168
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A8J2WSR2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSR2_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.570e-44 Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 1 Query: 16 KAAAVFTAGRKLEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYRIGTNTFIHSTLPGISKPKVVPLGDAAKDFIAATPAGPATSLPELLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEP 489 + A++ R L+D+ +Y++ +FD P+G+L++AY Q S +Y + +E EL A L RS L +LA+S+ L + + S++ GI KPKV+P GD + FI T AG T L + L+ ALSELCK KP GLDAV+WLG+W+L NNPNQPTV+EP Sbjct: 4 RKVAIYNCARALDDNDIYILQMFDTSPSGLLVKAYRQTESVEYFMPITESELDNAALSRSQQALSKLAESLSLVELSGKLVLMSSITGIIKPKVLPSGDGVRQFIGRTKAGRDT-LSDFLSEALSELCKEKPVGLDAVRWLGQWILKNNPNQPTVEEP 160
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: D8LSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK2_ECTSI) HSP 1 Score: 123 bits (309), Expect = 4.760e-33 Identity = 63/105 (60.00%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 178 AGLCRSDDDLKRLADSIQLYRIGTNTFIHSTLPGISKPKVVPLGDAAKDFIAATPAGPATSLPELLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEPD 492 AGL RS DL+RLA+SI +Y + FIHST GI+KPK+VP GD A+ F+ AG SL ELL T SELCKVKP+GLDAV+WL EWLL NNPN+P V D Sbjct: 4 AGLSRSRGDLERLAESIGIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTG-SLEELLTTPFSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHAD 107
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A7S3YI87_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI87_HETAK) HSP 1 Score: 111 bits (277), Expect = 9.870e-29 Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 25 AVFTAGRKLEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYRIGTNTFIHSTLPGISKPKVVPLGDAAK 321 +++ GR+L+D LYVI + DLEPAG+L++AYNQ TSA++ LSPSE EL+ AGL R +DL++L +SI L I TF+ S+LPG+ KVVP GD A+ Sbjct: 5 SLYVQGRRLKDGSLYVISVVDLEPAGVLVKAYNQITSAEFFLSPSEDELSEAGLSRKQEDLQKLVESIDLKEISGQTFLSSSLPGVRDAKVVPRGDQAQ 103
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: D0MVH9_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MVH9_PHYIT) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-13 Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 61 GLYVIGIFDLEPAGILIRAY----NQATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQL----YRIGTNTF-----------IHSTLPGISKPKVVPLGDAAKDFIAATPAGPAT----SLPE-------LLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEPD 492 G + + +F+++ AG+ + + +++ + EL +AG+ R+ D L DS++L Y G + + STLPGIS P + +AA + + P G +T +PE L+ L+ELC+ KP GL+AV+WLG W L +NP QP V+ D Sbjct: 19 GEFEVRVFEVDDAGVAAVVFQISQDHGPPLKFSRVFTRAELDKAGITRTLDGHVLLVDSLELVEDAYFTGNDAVTAGQNMLAAYQLSSTLPGISIPPPIVSHEAALSYFSRAPVGLSTWNNSRVPEEENLLANLVVKGLTELCREKPPGLEAVKWLGNWFLDHNPAQPKVEVDD 192
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A8J5IJY5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IJY5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.580e-13 Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 61 GLYVIGIFDLEPAGILIRAYN----QATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQL----YRIGTNTF-----------IHSTLPGISKPKVVPLGDAAKDFIAATPAGPAT----SLPE-------LLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEPD 492 G + + +F+++ AG+ + +++ S EL +AG+ R+ + L DS++L Y G + + STLPGIS P + +AA + + P G +T +PE L+ L+ELC+ KP GL+A++WLG W L +NP QP V+E D Sbjct: 819 GEFEVRLFEVDDAGVAAVVFQISQEHGPPLKFSRVFSRAELDKAGIARTLEGHVALVDSLELVEDAYFTGNDAVTAGQNMLAAYQLSSTLPGISFPPPIVSHEAALSYFSRAPVGLSTWNSSRVPEEENLLVNLVVKGLTELCREKPPGLEAIKWLGNWFLDHNPAQPKVEEDD 992
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A6A4F579_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F579_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.700e-13 Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 1 Query: 61 GLYVIGIFDLEPAGILIRAYNQATS----AQYTLSPSELELTRAGLCRSDDDLKRLADSIQLYR-----------IGTNTF----IHSTLPGISKPKVVPLGDAAKDFIAATPAGPAT----SLPE-------LLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQ 483 G + + +F++ AGI + +T +++ S EL +AG+ ++ + L DS++L G N + STLPGIS P + AA + A P G +T +PE L+ L+ELC+ KP GL+AV+WLG W L +NP QP V+ Sbjct: 19 GEFEVRLFEVYDAGIAAVVFQISTEHGSPLKFSRVFSRAELDKAGIAKTLEGHVTLVDSLELIEDAYFTGNDAVGAGQNVLAAYQLSSTLPGISFPPPIVSHQAALAYFARAPVGLSTWNNSRVPEDDNLLVNLIVKGLTELCREKPPGLEAVKWLGNWFLDHNPAQPKVE 189
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Match: A0A0P1B1F2_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1F2_PLAHL) HSP 1 Score: 70.9 bits (172), Expect = 4.270e-12 Identity = 52/172 (30.23%), Postives = 79/172 (45.93%), Query Frame = 1 Query: 67 YVIGIFDLEPAGILIRAYN----QATSAQYTLSPSELELTRAGLCRSDDDLKRLADSIQL----YRIGTNTF-----------IHSTLPGISKPKVVPLGDAAKDFIAATPAGPATS-----------LPELLATALSELCKVKPQGLDAVQWLGEWLLANNPNQPTVQEPD 492 + I +F+++ AGI A Q + ++ + S EL +AG+ R+ L DS++L Y G + + S LPGIS P + AA + A P G + L ++ L+ELC+ KP GL+A++WLG W L +NP QP V D Sbjct: 21 FEIQLFEVDGAGITAVAIQISQEQDSPQNFSRAFSRAELEKAGINRTSKAYVALVDSLELVEDVYFTGNDAISSGQNMLTAYRLSSKLPGISSPLPIVSHHAALSYFARAPVGFSARNTSQEVEEDNLLVNVIVKGLTELCREKPSGLNALRWLGNWFLEHNPAQPLVNADD 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13163.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13163.1.1 >prot_P-wetherbeei_contig13163.1.1 ID=prot_P-wetherbeei_contig13163.1.1|Name=mRNA_P-wetherbeei_contig13163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp MSWQKKAAAVFTAGRKLEDDGLYVIGIFDLEPAGILIRAYNQATSAQYTLback to top mRNA from alignment at P-wetherbeei_contig13163:792..1653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13163.1.1 ID=mRNA_P-wetherbeei_contig13163.1.1|Name=mRNA_P-wetherbeei_contig13163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=862bp|location=Sequence derived from alignment at P-wetherbeei_contig13163:792..1653+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13163:792..1653+ >mRNA_P-wetherbeei_contig13163.1.1 ID=mRNA_P-wetherbeei_contig13163.1.1|Name=mRNA_P-wetherbeei_contig13163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig13163:792..1653+ (Phaeothamnion wetherbeei SAG_119_79)back to top |