mRNA_P-wetherbeei_contig13125.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13125.2.1
Unique NamemRNA_P-wetherbeei_contig13125.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: A0A1H2SLB4_THIRO (Uncharacterized protein n=2 Tax=Thiocapsa TaxID=1056 RepID=A0A1H2SLB4_THIRO)

HSP 1 Score: 209 bits (533), Expect = 2.060e-66
Identity = 103/171 (60.23%), Postives = 125/171 (73.10%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            I+ T+KWI  VV+GC  CPFAAKE   G++ Y V+   D +    AFL EC  LDE+P  ET+LLIL  A  DF+DYL+L E+AE LL+A  YEG YQVA FHP+YRF D+   DPANYTNRS YPMLHLLRE S+E  L+R+PD D+IPERNI FAREKGL  M++LR +
Sbjct:    9 IERTKKWISEVVIGCRMCPFAAKEFNRGSIHYRVEIDSDMEACLRAFLEECRRLDENPSIETTLLILPGAFPDFDDYLELVEMAEALLDAEGYEGCYQVAGFHPEYRFADAPEDDPANYTNRSLYPMLHLLREESIEHVLDRYPDADAIPERNIAFAREKGLESMKALRDA 179          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: UPI0018CB24D4 (DUF1415 domain-containing protein n=1 Tax=Panacibacter sp. DH6 TaxID=2793269 RepID=UPI0018CB24D4)

HSP 1 Score: 208 bits (529), Expect = 8.070e-66
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            I  T+KWI  VVVGCNFCPFAA+ELK  TV Y V++S +  V  E F+ EC  +D+   TETS +I T   +DFEDYLD   +AE LLE  DYEGVYQVASFHP+Y FDD    D +NYTNR+ YPMLH+LRE S+  ALE +PDPD+IPERNI+FAR+KG  +M+ LR +
Sbjct:    8 IAQTKKWITDVVVGCNFCPFAARELKRNTVHYIVENSTEISVCLETFIRECMRMDDDAATETSFIIYTNMFADFEDYLDFVSLAEALLEQEDYEGVYQVASFHPQYCFDDVEEDDASNYTNRAVYPMLHVLREESIGKALENYPDPDAIPERNIDFARKKGAAYMQMLRNA 178          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: UPI001E35878B (DUF1415 domain-containing protein n=1 Tax=Thiocapsa bogorovii TaxID=521689 RepID=UPI001E35878B)

HSP 1 Score: 207 bits (527), Expect = 1.850e-65
Identity = 102/174 (58.62%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    4 KNPIDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            ++ I  T+KWI  VV+GC  CPFAA+E   G + Y V D+ D +   +AF +EC  LD  P  ET+LLIL  A  DFE YLDL  +AE LLEA  YEG YQVA FHP YRF D+   DPANYTNRSPYPMLHLLRE S+E+ L+ +PDPD IPERNI FAR+KGL +M++LR +
Sbjct:    9 EDAIVRTKKWISEVVIGCRLCPFAAREFNRGAIHYQVGDASDQESCLKAFFSECRRLDTTPSIETTLLILPGAFPDFEAYLDLVALAEGLLEAEGYEGHYQVAGFHPDYRFADAPADDPANYTNRSPYPMLHLLREESIESVLQHYPDPDGIPERNIAFARQKGLEYMKALRDA 182          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: A0A832F6S8_9BACT (DUF1415 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A832F6S8_9BACT)

HSP 1 Score: 207 bits (526), Expect = 3.400e-65
Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSL 516
            I  T+ WIE VV+GCNFCPFAAKE++  T+ Y V ++ +   + EA L EC  LD+ P  ETS LI   A  DF +YL L E+AEQLL  N YEG+YQ+ASFHP+Y F+ S  GD ANYTNRS YPMLHLLRE S+E  LE++PDP++IPERN+ FAREKG+ +MR+L
Sbjct:    8 IQQTQNWIEQVVIGCNFCPFAAKEVRNDTIHYEVVEAVEMAAVLEALLIECGRLDQQPAIETSFLIFLDAFEDFNEYLTLVELAEQLLRKNRYEGIYQLASFHPRYIFEGSDEGDAANYTNRSVYPMLHLLREESIEKVLEKYPDPENIPERNVRFAREKGIDYMRAL 175          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: A0A495UZV9_9GAMM (Uncharacterized protein n=1 Tax=Thiocapsa rosea TaxID=69360 RepID=A0A495UZV9_9GAMM)

HSP 1 Score: 205 bits (522), Expect = 9.350e-65
Identity = 101/168 (60.12%), Postives = 121/168 (72.02%), Query Frame = 1
Query:   22 TRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            T+KWI  +V+GC  CPFAA+E   GT+ Y V+D+ D +    AFL+EC  LD  P  ET+LLIL  A   F+D+LDL E+AE LLEA  YEG YQVA FHP YRF D+   DPANYTNRS YPMLHLLRE  +E  LER+PD D+IPERNI FAREKGL  M++LR +
Sbjct:   11 TKKWISEIVIGCRLCPFAAREFNRGTIHYQVEDASDPESCLHAFLSECRRLDMTPSIETTLLILPAASPGFDDFLDLVEMAEDLLEAEGYEGQYQVAGFHPDYRFADAPKADPANYTNRSLYPMLHLLREEGIEHVLERYPDADAIPERNIAFAREKGLDHMKALRDA 178          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: UPI0019B1906F (DUF1415 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019B1906F)

HSP 1 Score: 205 bits (521), Expect = 1.330e-64
Identity = 98/170 (57.65%), Postives = 129/170 (75.88%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQ 522
            I+ T+KWI  VV+GC FCPFAA+E++  ++ Y V ++ D      AFL EC+ LD++P  ET+LLIL+ AV  FE+YLD+   AE+LL    YEGVYQ+ASFHP+YRF DSA  DPA+YTNRSP+PML +LRE SVE AL+ +P+P+ IPERN+ FAREKG+ FM+ LR+
Sbjct:    8 IEQTKKWISDVVIGCQFCPFAAREMRNNSIHYEVNEASDANECLNAFLEECDRLDKNPGVETTLLILSNAVKGFEEYLDVLHSAEKLLRKQGYEGVYQIASFHPEYRFADSATEDPADYTNRSPHPMLQILREESVEKALKMYPNPELIPERNVAFAREKGIVFMKMLRE 177          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: A0A5B8VE13_9BACT (DUF1415 domain-containing protein n=1 Tax=Panacibacter ginsenosidivorans TaxID=1813871 RepID=A0A5B8VE13_9BACT)

HSP 1 Score: 204 bits (518), Expect = 3.790e-64
Identity = 99/171 (57.89%), Postives = 122/171 (71.35%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            I  T+KWI  VV+GCNFCPFAA+E+K  +V Y V++S D       F+ EC  +D    TETS +I   A  +FEDYLDL  +AE LLE  DYEG+YQ ASFHP+Y F D+A  D ANYTNRS YPMLH+LRE SVE AL+ + DP+ IPERNI+FAREKG+ +M+ LR S
Sbjct:    8 IAQTKKWITDVVIGCNFCPFAAREVKRNSVNYIVEESNDIATCLHTFIQECVRMDNDAATETSFIIYPNAFENFEDYLDLVSLAETLLERQDYEGIYQAASFHPQYSFQDAATDDAANYTNRSIYPMLHILREESVETALDHYADPEDIPERNIKFAREKGVAYMKLLRDS 178          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: A0A4Q5S1G8_9BACT (DUF1415 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q5S1G8_9BACT)

HSP 1 Score: 203 bits (516), Expect = 8.410e-64
Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 1
Query:    4 KNPIDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDPDSIPERNIEFAREKGLGFMRSLRQS 525
            +  I  T+ WI  VVVGCNFCPFA+K LK  ++RY V  S   + + +AFL ECE+LD HP+ ETSLLIL  +  +F+DYL+L  +AE LL+  DYEGVYQVASFHP Y F  + P DPAN+TNRS YPMLHLLRE S+E A+E+ P+P+SIP+ NI FAR KG   + +LR++
Sbjct:    5 EKAIQETKNWITDVVVGCNFCPFASKVLKLDSIRYIVTSSPKMEDILQAFLDECEYLDAHPDIETSLLILLNSNENFDDYLELVGLAEDLLDEEDYEGVYQVASFHPDYIFAGAPPDDPANFTNRSIYPMLHLLREESIERAIEKFPNPESIPDNNIVFARNKGFAALEALRKA 178          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: UPI0016503F57 (DUF1415 domain-containing protein n=1 Tax=Flavihumibacter stibioxidans TaxID=1834163 RepID=UPI0016503F57)

HSP 1 Score: 202 bits (513), Expect = 2.250e-63
Identity = 101/172 (58.72%), Postives = 126/172 (73.26%), Query Frame = 1
Query:   13 IDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHP-DPDSIPERNIEFAREKGLGFMRSLRQS 525
            I  T+KWI  VV+GCNFCPFAA+E+K  TVR+TV +S+  +    AFL  C  LD+    ET+L+I      DFE+YLDL E+AE+L+ + DYEGVYQVASFHP+Y+F   A  DPAN+TNRSPYPMLHLLRE S+E ALE +  DP+ IPE NI FAREKGL +M+ LR +
Sbjct:    8 ISQTKKWITDVVIGCNFCPFAAREMKRNTVRFTVSESQSIEECLTAFLEACRQLDDDESIETTLVIFPNLTGDFEEYLDLVEMAEELIASEDYEGVYQVASFHPEYQFAGVASDDPANFTNRSPYPMLHLLREESLEKALEFYQGDPEEIPENNIRFAREKGLLYMKMLRDN 179          
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Match: UPI001CC391BD (DUF1415 domain-containing protein n=1 Tax=Flavihumibacter profundi TaxID=2716883 RepID=UPI001CC391BD)

HSP 1 Score: 201 bits (511), Expect = 4.680e-63
Identity = 102/175 (58.29%), Postives = 127/175 (72.57%), Query Frame = 1
Query:    4 KNPIDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEAFLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGVYQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHP-DPDSIPERNIEFAREKGLGFMRSLRQS 525
            +N I+ TRKWI  VVVGCN CPFAA+E+   TVRY V +     +  +AFL EC +LD HPETET LLI ++A   F DYLD+  +AE+L+E   YEG+YQVASFHP Y F+ +   D ANYTNRSPYPMLHLLRE S+E ALE +  DP+ IP RN++FAREKGL +M+ LR +
Sbjct:    5 ENVINQTRKWITDVVVGCNLCPFAAREMSRETVRYKVVEEIAEDLCLQAFLDECLYLDGHPETETCLLIFSRAFPGFMDYLDIVSLAEELIETEGYEGIYQVASFHPDYLFEGAPANDAANYTNRSPYPMLHLLREKSIEIALEYYSGDPEDIPIRNMQFAREKGLIYMKMLRDN 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13125.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H2SLB4_THIRO2.060e-6660.23Uncharacterized protein n=2 Tax=Thiocapsa TaxID=10... [more]
UPI0018CB24D48.070e-6659.65DUF1415 domain-containing protein n=1 Tax=Panaciba... [more]
UPI001E35878B1.850e-6558.62DUF1415 domain-containing protein n=1 Tax=Thiocaps... [more]
A0A832F6S8_9BACT3.400e-6558.93DUF1415 domain-containing protein n=1 Tax=Chitinop... [more]
A0A495UZV9_9GAMM9.350e-6560.12Uncharacterized protein n=1 Tax=Thiocapsa rosea Ta... [more]
UPI0019B1906F1.330e-6457.65DUF1415 domain-containing protein n=1 Tax=Chitinop... [more]
A0A5B8VE13_9BACT3.790e-6457.89DUF1415 domain-containing protein n=1 Tax=Panaciba... [more]
A0A4Q5S1G8_9BACT8.410e-6456.90DUF1415 domain-containing protein n=1 Tax=Chitinop... [more]
UPI0016503F572.250e-6358.72DUF1415 domain-containing protein n=1 Tax=Flavihum... [more]
UPI001CC391BD4.680e-6358.29DUF1415 domain-containing protein n=1 Tax=Flavihum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13125contigP-wetherbeei_contig13125:1183..1707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog760192.Halhy_6198
PFAMsDUF1415
Model size525
Max annot lvl976|Bacteroidetes
KEGG koko:K09941
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.35e-62
EggNOG OGsCOG3310@1|root,COG3310@2|Bacteria,4P354@976|Bacteroidetes,1IY2H@117747|Sphingobacteriia
DescriptionProtein of unknown function (DUF1415)
Cds size525
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185974.8040326-CDS-P-wetherbeei_contig13125:1182..17071683185974.8040326-CDS-P-wetherbeei_contig13125:1182..1707Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13125 1183..1707 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13125.2.1prot_P-wetherbeei_contig13125.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13125 1183..1707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13125.2.1

>prot_P-wetherbeei_contig13125.2.1 ID=prot_P-wetherbeei_contig13125.2.1|Name=mRNA_P-wetherbeei_contig13125.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
MKNPIDVTRKWIEAVVVGCNFCPFAAKELKAGTVRYTVQDSEDWKVLQEA
FLAECEWLDEHPETETSLLILTKAVSDFEDYLDLAEVAEQLLEANDYEGV
YQVASFHPKYRFDDSAPGDPANYTNRSPYPMLHLLREASVEAALERHPDP
DSIPERNIEFAREKGLGFMRSLRQS
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mRNA from alignment at P-wetherbeei_contig13125:1183..1707-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13125.2.1 ID=mRNA_P-wetherbeei_contig13125.2.1|Name=mRNA_P-wetherbeei_contig13125.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig13125:1183..1707- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGAACCCTATCGATGTCACCCGCAAATGGATCGAAGCCGTCGTCGT CGGCTGCAACTTTTGCCCCTTTGCCGCCAAAGAACTCAAGGCCGGCACGG TCCGTTACACGGTGCAAGACAGTGAAGACTGGAAGGTCCTCCAGGAGGCC TTCCTGGCCGAATGCGAATGGCTCGACGAGCATCCCGAGACCGAGACCAG TCTGCTGATTTTGACCAAGGCCGTGTCTGATTTTGAAGATTATCTGGACC TGGCCGAAGTGGCCGAGCAACTGCTCGAGGCCAACGACTACGAAGGCGTC TATCAAGTGGCGAGCTTTCACCCTAAGTATCGTTTCGATGACTCGGCTCC CGGCGATCCGGCGAACTACACGAACCGCTCTCCCTATCCGATGTTGCATC TCTTACGCGAAGCCAGCGTAGAAGCGGCCCTGGAACGCCATCCGGACCCG GACAGCATTCCAGAGCGCAACATCGAGTTCGCCCGCGAAAAAGGCCTGGG ATTTATGCGGTCTCTGCGCCAGTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13125:1183..1707-

>mRNA_P-wetherbeei_contig13125.2.1 ID=mRNA_P-wetherbeei_contig13125.2.1|Name=mRNA_P-wetherbeei_contig13125.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig13125:1183..1707- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGAACCCTATCGATGTCACCCGCAAATGGATCGAAGCCGTCGTCGT
CGGCTGCAACTTTTGCCCCTTTGCCGCCAAAGAACTCAAGGCCGGCACGG
TCCGTTACACGGTGCAAGACAGTGAAGACTGGAAGGTCCTCCAGGAGGCC
TTCCTGGCCGAATGCGAATGGCTCGACGAGCATCCCGAGACCGAGACCAG
TCTGCTGATTTTGACCAAGGCCGTGTCTGATTTTGAAGATTATCTGGACC
TGGCCGAAGTGGCCGAGCAACTGCTCGAGGCCAACGACTACGAAGGCGTC
TATCAAGTGGCGAGCTTTCACCCTAAGTATCGTTTCGATGACTCGGCTCC
CGGCGATCCGGCGAACTACACGAACCGCTCTCCCTATCCGATGTTGCATC
TCTTACGCGAAGCCAGCGTAGAAGCGGCCCTGGAACGCCATCCGGACCCG
GACAGCATTCCAGAGCGCAACATCGAGTTCGCCCGCGAAAAAGGCCTGGG
ATTTATGCGGTCTCTGCGCCAGTCG
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