mRNA_P-wetherbeei_contig1312.3.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: D8LFL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL3_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.040e-25 Identity = 105/266 (39.47%), Postives = 133/266 (50.00%), Query Frame = 1 Query: 1 RGMVCRTCQLDF-EEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQE---------------------------------------VMFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAP-VRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C C L F ++ + Q HF+++ H+ANLRR+LAGKP + + D E AAA XXXXXXXXXXXXXX GA+ G+ L VE+E + F+ G +AF++S+ AL G GD DPW L + LW V+ILRSG+FA AVFE + VVCHKV RRYT+RAKRGG+QS+YD+ GRK QSAGA LRR Sbjct: 85 RGLTCIRCGLKFGDDRAAQVQHFKSALHMANLRRQLAGKPRISQAQLDDETAAAXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXEGPGSVGATERGL-DLDGVEEEXXXXXXXXXXXXXXXXXAENGYPERGRVKVDFSLQEGPRLTFVPRGSAWAFSLSSAAL-------GMERGD---------DPWGRLDSLVGTEGENRLWAVVILRSGKFAAAVFEGQAVVCHKVFRRYTIRAKRGGSQSSYDSGGRKAQSAGAALRR 330
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A836CLF2_9STRA (bVLRF1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF2_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.540e-22 Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 439 ASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 A DPWR L +A+P R LW VIILRSGRFAGAVFE K + HK +RRYT+RAKRGGAQS+YD GR+P+S GA LRR Sbjct: 116 APVDPWRALYELVASPNR-LWTVIILRSGRFAGAVFEGKVAIEHKTLRRYTIRAKRGGAQSSYDTAGRRPKSMGAQLRR 193
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: T0SIB7_SAPDV (C2H2-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIB7_SAPDV) HSP 1 Score: 97.4 bits (241), Expect = 1.070e-19 Identity = 76/235 (32.34%), Postives = 108/235 (45.96%), Query Frame = 1 Query: 1 RGMVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGA----------AADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C TC+L+FE++ EQQAHF+ H+ NL+R+ G + DA A AAD EDE D+ + + S + P++ AFT +T + + + D AS D +C + P W V + R+GRFAGAVF+ +V+ HK +RYT R K+GG+QSA+DA G K +SAGA LRR Sbjct: 52 RGLTCGTCRLEFEDVKEQQAHFKTDLHVYNLKRKSKGLDCVTLAAYDAFVASQATTSTTPLAADSDEDEAQDVYRHPLDLSISSDENDSDDE------------GSDANLQREPLQ------------AFTDNTTLFKIYNASFPQWSEKDKATFQASTDMVQCFSTD---PTYYQWAVFLFRAGRFAGAVFQKDKVLVHKAFQRYTTRRKQGGSQSAHDAAGGKAKSAGAQLRR 259
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A7S3HE92_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE92_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.270e-18 Identity = 80/241 (33.20%), Postives = 117/241 (48.55%), Query Frame = 1 Query: 1 RGMVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLL---EAGKED-AEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLM--------SRASYSGASSTGIVHLFPVEQEV--MFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASA-DPWRCLTRTLAAPVR-PLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C C L F+++ EQQ HF++ HL NL+RR+ G +L +A D AE ++ +E+ D S+++L S + A +HL V+ + + + GM F +V R N DAS PW L+ + R + V +LRSGRFAGA+F+ + ++ HKVMRRYT+RAK GG QS++D K +SAGA LRR Sbjct: 70 RGLTCIACHLVFDDVREQQLHFKSDLHLLNLKRRVHGLSVLLNSDADTNDLAETGKDPLSTEEDDEGSDGSEDREADIDTETIDSENFLPTGFTNEVGSISKEFSAQRGSTLHLRDVQLPLWELVVSTGM---FPSGSVFHTREWSNH----------TDASQPSPWAQLSAQVEHIRRNKICGVFLLRSGRFAGAIFDGQNLLIHKVMRRYTVRAKAGGGQSSHDNKSGKAKSAGAMLRR 297
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: UPI0003592A45 (ankyrin repeat and zinc finger domain-containing protein 1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003592A45) HSP 1 Score: 93.2 bits (230), Expect = 3.270e-18 Identity = 66/223 (29.60%), Postives = 97/223 (43.50%), Query Frame = 1 Query: 7 MVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 M C C++ F + +Q +H+++ H NL RRL G+P + ++ E A DV+ V P QD SG T + + +F K + ++ L D DP + P + W+++++ +G FAGAVF KQV+ HK RYT+RAKRG AQS+ D G P+SAGA LRR Sbjct: 75 MSCNCCKVSFTDREDQLSHYKSDWHRYNLHRRLTGQPFVT--EDTFEEIAGDVSSISGSDEDDDDADAVLRETTNVIPHQD--------SGMDLTSSPIVNERKFHKIFFKNALGERISVYRCLLHHKK--------------DPVTDPTELVKTVTKLPKQTKWIILMVSAGHFAGAVFHGKQVIEHKTFHRYTVRAKRGTAQSSRDKQGNAPKSAGARLRR 273
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A067BVU5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BVU5_SAPPC) HSP 1 Score: 90.9 bits (224), Expect = 1.850e-17 Identity = 87/225 (38.67%), Postives = 120/225 (53.33%), Query Frame = 1 Query: 1 RGMVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C TC+L+FE++ EQQAHF+ H+ NL+R+ G + DA A A XXXXXXXXXXXXX DA D +S +L ++E + AFT +T + + + D A+ D + + T AA + W V + R+GRFAGAVF+ +V+ HK +RYT R K+GG+QSA+DA G K +SAGA LRR Sbjct: 52 RGLTCGTCRLEFEDVKEQQAHFKTDLHVYNLKRKSKGLDCVTLDAYDA--YVASQATKXXXXXXXXXXXXXXXAQDAYRHPLDLSLSXXXXXXXXXGSEANL---QREPL-------QAFTDNTTLFKIYNASFPQWSEKDKASFQATTDMVQSFS-TDAAYYQ--WAVFLFRAGRFAGAVFQKDKVLVHKAFQRYTTRRKQGGSQSAHDAAGGKAKSAGAQLRR 261
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A1V9YC04_9STRA (bVLRF1 domain-containing protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC04_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.650e-16 Identity = 77/228 (33.77%), Postives = 112/228 (49.12%), Query Frame = 1 Query: 1 RGMVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVAL--ERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAPVRPL-WVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C TC+L+F+++ EQQ HF+ +H+ NL+R+ G +E + A XXXXXXXXX D A++ + + S S G V P++ F + Y +T E+ N V + + L A W + + R+GRFAGAVF+ +V+ HK +RYT R K+GG+QSA+DA G K +SAGA LRR Sbjct: 61 RGLTCGTCRLEFDDVKEQQNHFKTDYHVYNLKRKSKGLECVELSEYQAFVNVQTTXXXXXXXXXXXXXXERHPLDLALSSDE-------ADSDDDSEGNVQREPLQA---FSGDKLLYKIYNATFPQWSEKNKTNFQATVA---------------MVQDLVADASYYQWAIFLFRAGRFAGAVFQKDKVLVHKAFQRYTTRRKQGGSQSAHDAAGGKAKSAGAQLRR 263
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: G4YWS4_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YWS4_PHYSP) HSP 1 Score: 86.7 bits (213), Expect = 5.240e-16 Identity = 74/228 (32.46%), Postives = 102/228 (44.74%), Query Frame = 1 Query: 4 GMVCRTCQLD-FEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVALERPPKN---AGENVGDDGDDGDASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 G+ C C + FE + EQ AHF+++ H NL RR G L +E+A ++D++ S+A + A T V K+ +N+ D D+ S +P+ L + A+ R W V +LRSGRFAGAVFE + +CHK +RYT R K+GGAQSA DA G K +SAGATLRR Sbjct: 72 GLRCGACDIAAFESLDEQYAHFKSAAHCVNLNRRARG--LASLSEENALAYLERHSQDKK--------------------------SKAEKADEGYRSSXXXXXXXXXXXXXXXXXKVATTTEPVVEFSDGKSIFKVFKNILPDADE--ESFNPYASLDKVCASKFR--WAVFLLRSGRFAGAVFEKDKALCHKTFQRYTTRRKQGGAQSASDASG-KAKSAGATLRR 266
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A482RV00_9ARCH (GNAT family N-acetyltransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV00_9ARCH) HSP 1 Score: 84.0 bits (206), Expect = 3.900e-15 Identity = 78/257 (30.35%), Postives = 109/257 (42.41%), Query Frame = 1 Query: 1 RGMVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGK------------EDAE----GAAADVAEDEEXXXXXXXXXXXXXXDDAVAPSQDWLMSRASYSGASSTGIVHLFPVEQEVMFLKMGMPYAFTISTVALERPPKNAGENVGDDGDDGDASADPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFE----------------AKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 RG+ C TC+L F+ +Q AHF++ H NL R+L G+P +E G+ +D+E G ++ +ED + + + R S+S T HL LK PY TIS A D +A L + RPL V ILRSG+F GA+F + ++ HKV+RRYT+RAK GG QS++D G K +S GA LRR Sbjct: 127 RGLTCLTCKLAFDTREDQYAHFKSDLHRLNLSRKLKGEPPVEHGELHTTIMEDTKLSDDSEREEGGTSSGESEDSDTAHEDNNNDNEAQDSLSQVYRDKYGEVRKSFSPRYGTAY-HLS--------LKSLAPYVLTISGALFHTTSPLADRRWFDS-----QNALFPSVLQQMQHVRSRPLIAVFILRSGKFGGAIFNPPTTTTSINPHNSHNASPSLLVHKVLRRYTVRAKAGGGQSSHDNKGGKAKSMGAQLRR 369
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Match: A0A5D6YEI0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEI0_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.600e-15 Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 448 DPWRCLTRTLAAPVRPLWVVIILRSGRFAGAVFEAKQVVCHKVMRRYTMRAKRGGAQSAYDADGRKPQSAGATLRR 675 DP+ L A+ R W V +LRSGRFAGAVF+ VCHK +RYT+R K+GG+Q+A DA G K +SAGATLRR Sbjct: 209 DPYAALDAARASGFR--WAVFLLRSGRFAGAVFDRDTAVCHKTFQRYTVRRKQGGSQAASDASGGKAKSAGATLRR 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1312.3.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1312.3.4 >prot_P-wetherbeei_contig1312.3.4 ID=prot_P-wetherbeei_contig1312.3.4|Name=mRNA_P-wetherbeei_contig1312.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MVCRTCQLDFEEISEQQAHFRNSHHLANLRRRLAGKPLLEAGKEDAEGAAback to top mRNA from alignment at P-wetherbeei_contig1312:6491..7347+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1312.3.4 ID=mRNA_P-wetherbeei_contig1312.3.4|Name=mRNA_P-wetherbeei_contig1312.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=857bp|location=Sequence derived from alignment at P-wetherbeei_contig1312:6491..7347+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1312:6491..7347+ >mRNA_P-wetherbeei_contig1312.3.4 ID=mRNA_P-wetherbeei_contig1312.3.4|Name=mRNA_P-wetherbeei_contig1312.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig1312:6491..7347+ (Phaeothamnion wetherbeei SAG_119_79)back to top |