mRNA_P-wetherbeei_contig13082.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A6H5K5D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D2_9PHAE) HSP 1 Score: 134 bits (337), Expect = 8.440e-34 Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 34 WQMLPQFACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCK-----AIRGCELVAVLLCEGLVEDPVVVRRLIRQV 411 W +P CLY++DL++ AC AATASTDDSELLELQEAGV +L V + FA VPD D D+ +V G++V L+ SISQIT AARPAL CK A RGCELV L+ EGLV+D VV++RL+RQV Sbjct: 29 WAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTVVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVREGLVKDKVVLKRLVRQV 159
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: D7FJ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ51_ECTSI) HSP 1 Score: 114 bits (285), Expect = 8.620e-27 Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 34 WQMLPQFACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCK-----AIRGCELVAVLLCE 363 W +P CLY++DL++ AC AATASTDDSELLELQEAGV +L V + FA VPD D D+ +V G++V L+ SISQIT AARPAL CK A RGCELV L+ E Sbjct: 454 WAQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQVPDSDEDELGLVVVLGKSVRAPTLALELSISQITGAARPALGCKVSPRLAQRGCELVVTLVRE 568
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A835Z1V0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.640e-11 Identity = 52/118 (44.07%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 121 SELLELQEAGVRLLITVVQAFA----------------AVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKA-----IRGCELVAVLLCEGLVEDPVVVRRLIRQV 411 SEL ELQ GV LL+ +QA+A PDPD D + A R L+QS+SQ+ SAARPAL C RGC LV L+ EGLV D VV+RRL+RQV Sbjct: 1986 SELHELQAGGVDLLLEALQAYANAHTYNRIAASCDTIAQAPDPDADASGA------------RALEQSVSQMASAARPALACGVWPPLLTRGCRLVLALVREGLVTDVVVLRRLVRQV 2091
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: K0R547_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R547_THAOC) HSP 1 Score: 66.6 bits (161), Expect = 4.310e-10 Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 4 GGGAGVGALTWQMLPQFACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKAIR---------------GCELVAVLLCEGLVEDPVVVRRLIRQV 411 GG GVG LP F +++ ++ AC+A+TA++++SEL +Q AG+RL+ +V AFAA DP+ R L Q +SQI S+ R L +++ GC+ + LL L+ DPVV+RRL++ V Sbjct: 1771 GGSPGVGL---HALPAF---FLEPFVNIACSASTATSNNSELPSVQAAGLRLMTSVTNAFAAHVDPEDGS---------------RVLSQYLSQIISSVRHGLNAESLATESTTGSSFHLLFSSGCDALYALLARELIADPVVMRRLVQPV 1900
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A7S2M4Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4Z2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.990e-9 Identity = 46/136 (33.82%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 43 LPQFACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKAI---------------RGCELVAVLLCEGLVEDPVVVRRLIR 405 L F L++++L++TAC A+ A++++SEL +Q +G+R LITV++AF D T+ G +V L+Q SQI SA R AL +++ GC+ + V++ G V +PVV+RRL++ Sbjct: 1345 LHSFPVLHLEELVTTACIASAATSNNSELPSVQVSGLRFLITVLKAFGEELDASTND-------GTSV------LEQYSSQIISAVRHALNAESLLEESVATSGFHRLFAAGCDALFVMINGGFVSEPVVIRRLLQ 1467
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A7S4UYX5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UYX5_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 5.800e-6 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 52 FACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKA---------------IRGCELVAVLLCEGLVEDPVVVRRLIRQV 411 + ++++LIS AC+ ATA++D +EL LQ +G+R+LI +++ FA DPD + G T L+Q +QI S+ + AL + + GCE + L+ +V D V ++RL+R V Sbjct: 398 YVAFHINELISAACSTATATSDQAELPSLQNSGLRVLIYLIKFFANALDPD-------LAGDGT-----SILEQFSAQIISSIKHALSSQDSSDGPGNDIRTRLLFMSGCEALYSLIENNMVSDTVGLKRLLRLV 520
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A7S4V9H3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V9H3_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 6.010e-6 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 52 FACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKA---------------IRGCELVAVLLCEGLVEDPVVVRRLIRQV 411 + ++++LIS AC+ ATA++D +EL LQ +G+R+LI +++ FA DPD + G T L+Q +QI S+ + AL + + GCE + L+ +V D V ++RL+R V Sbjct: 398 YVAFHINELISAACSTATATSDQAELPSLQNSGLRVLIYLIKFFANALDPD-------LAGDGT-----SILEQFSAQIISSIKHALSSQDSSDGPGNDIRTRLLFMSGCEALYSLIENNMVSDTVGLKRLLRLV 520
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A7S1Z2J4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2J4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 6.110e-6 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 52 FACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPALQCKA---------------IRGCELVAVLLCEGLVEDPVVVRRLIRQV 411 + ++++LIS AC+ ATA++D +EL LQ +G+R+LI +++ FA DPD + G T L+Q +QI S+ + AL + + GCE + L+ +V D V ++RL+R V Sbjct: 755 YVAFHINELISAACSTATATSDQAELPSLQNSGLRVLIYLIKFFANALDPD-------LAGDGT-----SILEQFSAQIISSIKHALSSQDSSDGPGNDNRTRLLFMSGCEALYSLIENNMVSDTVGLKRLLRLV 877
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: K3WQC4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQC4_GLOUD) HSP 1 Score: 54.3 bits (129), Expect = 8.480e-6 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 52 FACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPD 204 F C+Y+D+ ++ AC AATAS D SEL Q G+RLL +V FAA DP+ Sbjct: 1596 FLCMYLDEFVTLACHAATASADGSELQMFQSVGLRLLRVLVHKFAAARDPE 1646
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Match: A0A7S1FZG8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZG8_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.090e-5 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 49 QFACLYVDDLISTACTAATASTDDSELLELQEAGVRLLITVVQAFAAVPDPDTDQAAAAMVGGRTVAVAPRTLQQSISQITSAARPAL---QCKAIRGC-ELVAVLLCEGLVEDPVVVRRLIR 405 Q A YV D IS AC+AATAS++ ++L LQ+ G+ L V+ F A+ G + AP LQ S +QITSA + AL Q I C +VA+L+ + LV D VV+ R+++ Sbjct: 135 QQAISYVKDFISAACSAATASSNHTDLAHLQQTGLEFLAAVISCFG------HSTASLEPAGLASKFAAPCLLQYS-TQITSAVKYALGSRQSNLINACTSVVALLVKKRLVVDNVVLCRIVK 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13082.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13082.1.1 >prot_P-wetherbeei_contig13082.1.1 ID=prot_P-wetherbeei_contig13082.1.1|Name=mRNA_P-wetherbeei_contig13082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MGGGAGVGALTWQMLPQFACLYVDDLISTACTAATASTDDSELLELQEAGback to top mRNA from alignment at P-wetherbeei_contig13082:888..1616+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13082.1.1 ID=mRNA_P-wetherbeei_contig13082.1.1|Name=mRNA_P-wetherbeei_contig13082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig13082:888..1616+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13082:888..1616+ >mRNA_P-wetherbeei_contig13082.1.1 ID=mRNA_P-wetherbeei_contig13082.1.1|Name=mRNA_P-wetherbeei_contig13082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig13082:888..1616+ (Phaeothamnion wetherbeei SAG_119_79)back to top |