mRNA_P-wetherbeei_contig13024.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A0F8XWY1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8XWY1_9ZZZZ) HSP 1 Score: 80.9 bits (198), Expect = 3.610e-18 Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 16 LGGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKPN 201 LGGA+RDRT DL+ A+ ALSQLSYGP + T +LVGLGR ELPTS LS RSNQLSY+PN Sbjct: 17 LGGAKRDRTADLLRARQALSQLSYGPDKT-FTPRQLVGLGRFELPTSPLSGVRSNQLSYRPN 77
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A0F8WUX4_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8WUX4_9ZZZZ) HSP 1 Score: 78.6 bits (192), Expect = 9.690e-18 Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 13 RLGGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKPN 201 R GGA+RDRT DL+ A+ ALSQLSYGP + R +LVGLGR ELPTS LS RSNQLSY+PN Sbjct: 9 RPGGAKRDRTADLLRARQALSQLSYGPFQTGTPR-QLVGLGRFELPTSPLSGVRSNQLSYRPN 70
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A8J4V8U4_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4V8U4_9ROSI) HSP 1 Score: 81.6 bits (200), Expect = 3.560e-17 Identity = 45/63 (71.43%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 19 GGARRDRTDDLMLAKHALSQLSYGP---GRREITRLELVGLGRLELPTSRLSSARSNQLSYKP 198 GGARRDRTDDLMLAKHALSQLSYGP + T +VGLGRLE PTS LS RSN LSY+P Sbjct: 176 GGARRDRTDDLMLAKHALSQLSYGPKGSAPADRTSRVVVGLGRLERPTSPLSGVRSNHLSYRP 238
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: R6I1J2_9PROT (Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 TaxID=1262706 RepID=R6I1J2_9PROT) HSP 1 Score: 72.8 bits (177), Expect = 1.920e-15 Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 HPNERLGGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKP 198 +P LGG + DRT D +LAK LSQLSY P + +VGLGRLELPTSRLS RSN LSYKP Sbjct: 5 YPLRLLGGGKEDRTPDPLLAKQVLSQLSYTPDK-------VVGLGRLELPTSRLSGVRSNHLSYKP 63
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A654CX76_9HYPH (Uncharacterized protein n=1 Tax=Bosea sp. 62 TaxID=2653182 RepID=A0A654CX76_9HYPH) HSP 1 Score: 74.3 bits (181), Expect = 2.450e-15 Identity = 50/77 (64.94%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 19 GGARRDRTDDLMLAKHALSQLSYGP-------------GRR-EITRLE---LVGLGRLELPTSRLSSARSNQLSYKP 198 GGARRDRTDDL LAK LSQLSYGP GR E RLE LVGLG E PTSRLSSARSNQLSY+P Sbjct: 44 GGARRDRTDDLKLAKLPLSQLSYGPMFLKGHAPLGAAAGRPCEPCRLEDHSLVGLGGFEPPTSRLSSARSNQLSYRP 120
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A8J4VFY4_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4VFY4_9ROSI) HSP 1 Score: 75.1 bits (183), Expect = 8.780e-15 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 12 KAWWSQTGSNRRPHACKARALPTELWPRPARDYALGTGGPGKT*TSDLTLIKRAL 176 K WW QTGSNRRPHACKARALP EL PR A GGPG T TSDLTLI+ AL Sbjct: 195 KKWWRQTGSNRRPHACKARALPAELCPR---SRASQIGGPGTTRTSDLTLIRGAL 246
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A653PL13_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. 8O TaxID=2653165 RepID=A0A653PL13_9PSED) HSP 1 Score: 72.4 bits (176), Expect = 1.180e-14 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 19 GGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKP 198 GGA+RDRT DL+ A+ ALSQLSYGP +LVGLGR ELPTS LS RSNQLSY+P Sbjct: 55 GGAKRDRTADLLRARQALSQLSYGPVF--FCTKQLVGLGRFELPTSPLSGVRSNQLSYRP 112
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A8H8Z0I0_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonas nitrosa TaxID=52442 RepID=A0A8H8Z0I0_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 5.490e-13 Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 16 LGGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKP 198 +GG RDRTDD +LAK LSQLSY P LVGLG LE PT RLSS SNQLSY+P Sbjct: 2 IGGGERDRTDDPLLAKQVLSQLSYTP--------YLVGLGGLEPPTPRLSSVCSNQLSYRP 54
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: A0A3M4T8A2_PSESG (Uncharacterized protein n=5 Tax=Pseudomonas syringae group TaxID=136849 RepID=A0A3M4T8A2_PSESG) HSP 1 Score: 66.6 bits (161), Expect = 7.440e-13 Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 19 GGARRDRTDDLMLAKHALSQLSYGP---GRREITRL------ELVGLGRLELPTSRLSSARSNQLSYKP 198 GGA+RDRT DL+ A+ ALSQLSYGP E + L +LVGLGR ELPTS LS SNQLSY+P Sbjct: 15 GGAKRDRTADLLRARQALSQLSYGPVFLHTVEASTLTSYLTSKLVGLGRFELPTSPLSGVCSNQLSYRP 83
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Match: E7C5I0_9PROT (Uncharacterized protein n=1 Tax=uncultured Rhodospirillales bacterium HF0500_23A22 TaxID=723611 RepID=E7C5I0_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 1.110e-12 Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 19 GGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPTSRLSSARSNQLSYKP 198 GG RDRTDDL+LAK ALSQLSY P +VGL R+EL TS LS RSNQLSY+P Sbjct: 33 GGGERDRTDDLLLAKQALSQLSYTP--------IMVGLRRVELLTSPLSGVRSNQLSYRP 84 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13024.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13024.2.1 >prot_P-wetherbeei_contig13024.2.1 ID=prot_P-wetherbeei_contig13024.2.1|Name=mRNA_P-wetherbeei_contig13024.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp HPNERLGGARRDRTDDLMLAKHALSQLSYGPGRREITRLELVGLGRLELPback to top mRNA from alignment at P-wetherbeei_contig13024:1522..1728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13024.2.1 ID=mRNA_P-wetherbeei_contig13024.2.1|Name=mRNA_P-wetherbeei_contig13024.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig13024:1522..1728+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13024:1522..1728+ >mRNA_P-wetherbeei_contig13024.2.1 ID=mRNA_P-wetherbeei_contig13024.2.1|Name=mRNA_P-wetherbeei_contig13024.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig13024:1522..1728+ (Phaeothamnion wetherbeei SAG_119_79)back to top |