mRNA_P-wetherbeei_contig13007.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A2N3WPI4_9PSEU (Steroid delta-isomerase-like uncharacterized protein n=6 Tax=Amycolatopsis TaxID=1813 RepID=A0A2N3WPI4_9PSEU) HSP 1 Score: 120 bits (301), Expect = 1.020e-32 Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 16 DPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 DP+ +A R++ AYN+ D D L L DIHVEHHNRG + +A +++ F PD+ F + R GDTVV E TW GT DV GFA GE +++L +T+RDG V +YHDYG Sbjct: 5 DPVKVAERFVEAYNSGDRDALLALCAEDIHVEHHNRGVDLNDRDAFGDIIKGFEAAFPDKHFENRRALHSDGDTVVVEHTWVGTAQADVPGFATAGEVARIDLCSRYTVRDGLVVEYHDYG 125
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: UPI0003FEC2B4 (nuclear transport factor 2 family protein n=1 Tax=Amycolatopsis thermoflava TaxID=84480 RepID=UPI0003FEC2B4) HSP 1 Score: 112 bits (280), Expect = 1.570e-29 Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 16 DPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 +P+ +A R++ AYN+ D D L L DI V HHNRG + A +++ F PD+ F + R + GD+V+ E TW GT DV GFA GE +++L +T+RDG V +YHDYG Sbjct: 5 EPVEVAERFVEAYNSGDRDRLLALCAEDIRVVHHNRGVDLSDKNAFGDIVKGFEAAFPDKHFENRRARHTDGDSVIIEHTWVGTAQADVPGFATAGEVARIDLCSRYTVRDGLVVEYHDYG 125
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A8J6IFZ4_9ACTN (Nuclear transport factor 2 family protein n=1 Tax=Sporichthya sp. TaxID=65475 RepID=A0A8J6IFZ4_9ACTN) HSP 1 Score: 109 bits (272), Expect = 2.480e-28 Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 10 MTDPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARK-GETVKLELACIWTIRDGRVADYHDYG 378 M D +AN ++ AYNA D D L L +I V HHNRG + G EA ++ F PD+RF + R + GDT V TW GT V GFA G+ KL+L I+T++DG + YHDYG Sbjct: 1 MADAASVANAFVDAYNAGDDDALLALCAENIEVVHHNRGVEVSGREAFGGLLGAFKGAFPDKRFENRRAEHSDGDTAVIAHTWTGTAAAAVPGFAENAGDVAKLDLCTIYTVKDGLIVSYHDYG 124
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A426QV30_9NOCA (Nuclear transport factor 2 family protein n=1 Tax=Rhodococcus sp. Eu-32 TaxID=1017319 RepID=A0A426QV30_9NOCA) HSP 1 Score: 105 bits (263), Expect = 6.430e-27 Identity = 52/127 (40.94%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1 TTAMTDPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGD-TVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 +T + I ++IAAYN+ D + + ++HVEHHNRG + AEA ++ QF+ PD+ F + R V GD TVV E TW T DV G+A GETV+L+++ +T+ +G V +YHDYG Sbjct: 2 STQTQTAVEIVEKFIAAYNSGDIPGILEVSAENLHVEHHNRGVSLDSAEAFADLLGQFAGAFPDKHFENRRALHVVGDDTVVVEQTWVATAIADVPGWAATGETVRLDVSTRFTVENGVVTEYHDYG 128
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A2S2BVK5_9NOCA (SnoaL-like domain-containing protein n=5 Tax=unclassified Rhodococcus TaxID=192944 RepID=A0A2S2BVK5_9NOCA) HSP 1 Score: 95.5 bits (236), Expect = 8.970e-23 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 28 IANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGD-TVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 + ++I AYN+ D + + D+ VEHHNRG + A+A ++ F+ PD+ F + R V D TV+ E TW T DV G+A+ GETV+L++ +T+ +G V +YHDYG Sbjct: 16 VVEKFIEAYNSGDVAAILEVTAPDLTVEHHNRGVKVDSAQAFADLLASFAGAFPDKHFENRRALHVVDDNTVLVEQTWVATAIADVPGWAQTGETVRLDVCTRFTVHEGVVTEYHDYG 133
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: UPI0015F03894 (nuclear transport factor 2 family protein n=1 Tax=Pseudonocardia pini TaxID=2758030 RepID=UPI0015F03894) HSP 1 Score: 94.0 bits (232), Expect = 2.980e-22 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 28 IANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQF-STLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 I ++ AYNA+DF+ + L++ + +H+NRG A L+A +R F S LPDR+ R V GD V E W GT D+ GF +G+T+ L ++T+RDG + +Y+DYG Sbjct: 9 IVEAYVDAYNAQDFEAMEALLSPQLDFQHYNRGFSFASAAELVATLRAFASDYLPDRKLGPALRVNVVGDVVYREQQWGGTLAVDLPGFGSQGDTLDDRLLTVFTVRDGVITEYYDYG 126
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A4S3K4G9_9GAMM (SnoaL-like protein n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4S3K4G9_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 1.170e-21 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 1 Query: 10 MTDPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFS-TLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRD-GRVADYHDYG 378 M D + ++NR +AAYNAKDFDTL L+ D+ H NRG + L+AV++ F+ L+PDR+ L R V GD +V +W GT D+ GF G+ + + + I D G + ++ D+G Sbjct: 1 MKDLVALSNRIVAAYNAKDFDTLKSLVHPDLDFSHVNRGFSYSKRDDLIAVLQMFAGELMPDRQMGKLERSVVDGDVIVRVASWGGTARADIPGFGSAGDRIGITICSILRFDDAGLLVEWKDFG 125
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: A0A4R8XLZ0_9MICO (Nuclear transport factor 2 family protein n=1 Tax=Cryobacterium sp. TMS1-20-1 TaxID=1259223 RepID=A0A4R8XLZ0_9MICO) HSP 1 Score: 86.7 bits (213), Expect = 2.140e-19 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 13 TDPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDYG 378 + P+ + + +I AYNA D D + L+ DI++ H NRG L +G + ++ + R +++PDR G V+ + T+ GTPT D+ F GE + LA ++TI DG+V Y DYG Sbjct: 5 SSPIEVVDDYIDAYNAFDVDRIGRLLADDIYLTHKNRGFLTEGKDPVIELYRGTPSVIPDRALVDRTMVTTDGTRVIVQHTFTGTPTVDLT-FGPAGEKFSIFLATVFTIEDGKVTKYEDYG 125
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: UPI0004BFACA1 (nuclear transport factor 2 family protein n=1 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI0004BFACA1) HSP 1 Score: 70.9 bits (172), Expect = 4.550e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 16 DPLHIANRWIAAYNAKDFDTLAGLMTAD--IHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARKGETVKLELACIWTIRDGRVADYHDY 375 D + +A +WIAAYNA DF+ A LMTAD + + + N + +GA S L D R +RR SGD VV E+ W G A GE V+LE + T RDGR++ Y +Y Sbjct: 2 DNVELAQKWIAAYNAHDFEQQAALMTADGEVLIPYIN---IAQGAA--WEQTGSNSARLVDDRIIEVRRITASGDAVVIEMLWHAISRGG-PGMAPVGERVELENCIVLTFRDGRISRYVEY 117
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Match: UPI001305375E (ester cyclase n=1 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI001305375E) HSP 1 Score: 51.2 bits (121), Expect = 1.950e-5 Identity = 35/113 (30.97%), Postives = 53/113 (46.90%), Query Frame = 1 Query: 37 RWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAVMRQFSTLLPDRRFHSLRRQFVSGDTVVSELTWEGTPTDDVEGFARK-GETVKLELACIWTIRDGRVADYHD 372 R++A NA+D + D +VEH R G AL A + +PD R +L Q + GD V + +T+ GT T + GFAR G +W ++ G A++ D Sbjct: 34 RYVALKNARDATRCGEIARVD-YVEHSGRSP--SGLAALAANWQAQFEAIPDLRV-TLDDQVIGGDRVAARMTYAGTHTRPLPGFARPTGRAFSFATFDLWRVQGGLFAEHWD 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13007.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13007.2.1 >prot_P-wetherbeei_contig13007.2.1 ID=prot_P-wetherbeei_contig13007.2.1|Name=mRNA_P-wetherbeei_contig13007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp MTDPLHIANRWIAAYNAKDFDTLAGLMTADIHVEHHNRGALIKGAEALLAback to top mRNA from alignment at P-wetherbeei_contig13007:1023..1403- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13007.2.1 ID=mRNA_P-wetherbeei_contig13007.2.1|Name=mRNA_P-wetherbeei_contig13007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:1023..1403- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13007:1023..1403- >mRNA_P-wetherbeei_contig13007.2.1 ID=mRNA_P-wetherbeei_contig13007.2.1|Name=mRNA_P-wetherbeei_contig13007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:1023..1403- (Phaeothamnion wetherbeei SAG_119_79)back to top |