mRNA_P-wetherbeei_contig13007.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001CCE6566 (TlpA family protein disulfide reductase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE6566) HSP 1 Score: 301 bits (770), Expect = 8.010e-98 Identity = 152/294 (51.70%), Postives = 192/294 (65.31%), Query Frame = 1 Query: 7 ARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 A DGD LWL + ATGW KP GLC+GE CVP+PR R+ + A WR G V+R G W+LG A+ RA+ALTSL APDFELP++ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L EA + V+A+A + A AR W+E A P YP LIDR+H A+LYN+VNVPQAVWIDE G++VRP ETAG D++R +R ++P A ++ K AY+DAVRDWAV+GAAS YA A L +P+ IA A+AHFR G L G+ E Sbjct: 16 ATVDGDALWLDRDELERATGWLWKPHGLCRGETCVPIPRGTDRRWVDGDRLDAAGLWRYAGWPVVRSGSGDIWVLGEGASSRASALTSLEAPDFELPELDGRLHRLSDYRGRKVFLVTWASWCGCRADLPVWQSLYEATREHGLTVLAIALDQPDA--ARPWLETASPGYPCLIDRDHLTAELYNLVNVPQAVWIDEAGRMVRPPETAGMTDSFRRMDRKSFTMPPEAQENRQRVKTAYLDAVRDWAVRGAASPYALDAEAVMARLTVPDAAIAEAHAHFRLGQALVRDGQTAE 307
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A4Q6A5T4_9DELT (TlpA family protein disulfide reductase n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q6A5T4_9DELT) HSP 1 Score: 296 bits (759), Expect = 2.830e-95 Identity = 151/296 (51.01%), Postives = 197/296 (66.55%), Query Frame = 1 Query: 1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 A+A ADGD LWL + S TGW KP GLC+ + C+P PR D + ++A WR V+ R GS W+LG A+ RAAALTSL APDF LPD+ G++HRLSD+RG++VFL TW+SW GCR DL VW +L E+ + F V+A+A + G + AR WIE A P YP LIDR+H A+LYN+VNVPQAVWIDE G++VRP E+AG D++RA +R ++PES ++AK AY+DAVRDWAV+G+AS YA A L +P+ A A+AHFR G L G+ +E Sbjct: 70 ANATADGDALWLDKGELESVTGWLWKPVGLCRDDTCMPFPRGDRTLVDG-DRIDVAGVWRHAEWPVVHSRSGSLWVLGEGASRRAAALTSLEAPDFALPDLDGRLHRLSDHRGRKVFLVTWASWCGCRADLPVWNSLYESAREHGFTVLAIALD--GPDAARPWIEAASPGYPCLIDRDHLTANLYNLVNVPQAVWIDEAGRMVRPPESAGMTDSFRAMDRQSFAMPESVREARDRAKAAYLDAVRDWAVRGSASPYALDAEAVMARLTVPDAASAEAHAHFRLGQALLRDGQADE 362
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001F2E0BBF (redoxin domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2E0BBF) HSP 1 Score: 294 bits (752), Expect = 4.940e-95 Identity = 151/294 (51.36%), Postives = 195/294 (66.33%), Query Frame = 1 Query: 7 ARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 A ADGD LWL + ATGW KPEGLC+GE C+P+PR + R + ++A WR G V+ R G+ W+LG A+ RAAALTSL APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L E ++ V+AVA + A AR W+E A P YP LIDR+H A+ YN+VNVPQAVWIDE G +VRP E AG D++RA +R ++PE+A ++ K AY+DAVRDWA +G AS YA A L +P+ I+ A+AHFR G L G+ +E Sbjct: 19 ATADGDALWLDMGELERATGWLWKPEGLCRGETCMPIPRGNR-RLVAGERLDVAGVWRQAGWPVVHSRSGNLWVLGEDASRRAAALTSLQAPDFVLPDLEGRLHRLSDYRGRKVFLVTWASWCGCRGDLPVWQSLHETIEKHGGTVLAVALDQPDA--ARPWLEAASPGYPCLIDRDHLTAESYNLVNVPQAVWIDETGHMVRPPEPAGMTDSFRAMDRKSFAMPEAAREARDRTKAAYLDAVRDWAARGRASPYALDEKAVMARLTVPDVGISEAHAHFRLGQALLREGQADE 309
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A7Y6XA84_9DELT (TlpA family protein disulfide reductase n=2 Tax=Myxococcus TaxID=32 RepID=A0A7Y6XA84_9DELT) HSP 1 Score: 291 bits (746), Expect = 4.240e-94 Identity = 152/296 (51.35%), Postives = 191/296 (64.53%), Query Frame = 1 Query: 16 DGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRK-----DASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 DGD LWL ATGW K GLC+ + C+P+PR D R +AG WR G V++ R G+ W+LG A+ RAAALTSL APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L E K F V+A+A + A AR WIE A P+YP LIDR+H A+LYN+VNVPQAVWIDE G +VRP E AG D +RA R S+PE+A ++AK AY+DAVRDW+V+G+AS YA A L +P+ IA A+A FR G L G+ +E Sbjct: 22 DGDSLWLDKEDFERATGWQWKAVGLCRDDTCMPIPRGGPKLVDGDRIDAAGV------WRHAGWPVVQSRSGTLWVLGEGASRRAAALTSLDAPDFALPDLDGRLHRLSDYRGRKVFLVTWASWCGCRGDLPVWQSLHETAKAHGFTVLAIALDQPDA--ARPWIEAASPSYPCLIDRDHLTAELYNLVNVPQAVWIDEAGHLVRPPEAAGMTDGFRAMERKSLSMPEAAREARDRAKAAYLDAVRDWSVRGSASPYALDAEGVMARLTVPDAAIAEAHARFRLGQALLRDGQADE 309
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI00202328E1 (redoxin domain-containing protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI00202328E1) HSP 1 Score: 289 bits (740), Expect = 3.210e-93 Identity = 153/301 (50.83%), Postives = 198/301 (65.78%), Query Frame = 1 Query: 1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVP---RKDASRYSSAGTT---NIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885 ADA+A+GD LWL + +ATGW KPEGLC G++C+PVP R R +AG N+AA WR G+ V+ D G NW+LG+ AA+RA AL SL APDF LPD+ GQ H LS YRG+++ L TW+SW GCRLDL++WQ++ ++ +F V+A+A ++ AE AR WIE A P+YP LID +HHVA LY +VNVPQAVWIDE G+IVRP ETAGS DA+R+ +R +L S+Q K AY+ AVRDWA QG AS +A QA A + A A+A F G L G+ + Sbjct: 14 ADAQAEGDALWLTATDIEAATGWQWKPEGLCHGDVCMPVPPAQRAQWVREEAAGQPARLNLAALWRHGGQPVVHDGSGRNWVLGTGAAQRAEALQSLQAPDFTLPDLQGQPHSLSQYRGRKLLLVTWASWCGCRLDLALWQSMMNELQDTNFTVLAIALDT--AEAARPWIEAAAPSYPCLIDADHHVAALYGIVNVPQAVWIDEAGRIVRPTETAGSSDAFRSIDRSTGALAPELAQASQQRKAAYLAAVRDWARQGPASAHALPAPQAAARXXXXSAAQAEAHAWFLLGQQLLRQGQAD 312
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A0S9NH76_9BURK (Thioredoxin domain-containing protein n=1 Tax=Pseudorhodoferax sp. Leaf274 TaxID=1736318 RepID=A0A0S9NH76_9BURK) HSP 1 Score: 288 bits (738), Expect = 5.690e-93 Identity = 148/291 (50.86%), Postives = 190/291 (65.29%), Query Frame = 1 Query: 28 LWLRNAAVTSATGWTMKPEGLCQGEICVPVP---RKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEEG 891 LWL + V +ATGW KP+GLC+G C+P+P ++AAFWR LG + D G+ W+LG A +AAA SL APDFELPD++G+MHRLSD RG+RVF+ TW+SW GCR+DL++WQAL + F V+A+A + A +AR WIE A PT+P LID EH VA YN+VNVPQAVWIDE G+IVRP E+AGS D R R+R ++PE+ VA K Y+DAVRDWA GAASR+A P + R L P+ IA A+A FR G L +G+ +G Sbjct: 22 LWLDASQVHAATGWEWKPQGLCRGAACMPIPPAGHGGGQALVDGARLDLAAFWRHLGWPAVHDDAGALWVLGEGADSQAAAWESLQAPDFELPDLAGRMHRLSDLRGQRVFMATWASWCGCRVDLALWQALQASAGAHGFTVLAIALDD--AASARPWIEAAAPTFPCLIDAEHLVAQRYNLVNVPQAVWIDEEGRIVRPPESAGSTDGLRERDRQTNAMPEAVVARRAAIKATYLDAVRDWAEHGAASRHALAPQEVRRRLQRPDAAIAEAHARFRLGQSLLRAGQEAQG 310
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001A30A18D (Redoxin domain-containing protein n=1 Tax=Myxococcaceae bacterium JPH2 TaxID=2799617 RepID=UPI001A30A18D) HSP 1 Score: 287 bits (735), Expect = 1.670e-92 Identity = 150/301 (49.83%), Postives = 194/301 (64.45%), Query Frame = 1 Query: 1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRK-----DASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 A A DGD LWL + ATGW KP GLC+ + C+P PR D R +AG WR G V+ R G W+LG A+ RAAALTSL+APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR +L VWQ+L +A K F V+AVA + A AR WIE A P YP LIDR+H +A+LYN+VNVPQAVWID+ GQ+VRP E+AG D++R +R ++PE A ++ K AY+ AVRDWAV+G+AS Y + L++P+ I A+AHFR G L G+ +E Sbjct: 17 ARATVDGDALWLDKGELELATGWLWKPVGLCRDDTCMPFPRGNQNLVDGERIDAAGA------WRHAGWPVVHSRSGKIWVLGEGASRRAAALTSLNAPDFALPDLDGRLHRLSDYRGRKVFLVTWASWCGCRGELPVWQSLHQAAKEHGFTVLAVALDQPDA--ARPWIEAASPGYPCLIDRDHLIAELYNLVNVPQAVWIDDAGQMVRPPESAGMTDSFREMDRKTFAMPEEAREARDRGKAAYLHAVRDWAVRGSASPYTLDAKAVMSRLSVPDAAITEAHAHFRLGQALMRDGQADE 309
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A4R8XKF3_9MICO (TlpA family protein disulfide reductase n=1 Tax=Cryobacterium sp. TMS1-20-1 TaxID=1259223 RepID=A0A4R8XKF3_9MICO) HSP 1 Score: 246 bits (628), Expect = 7.200e-76 Identity = 130/317 (41.01%), Postives = 178/317 (56.15%), Query Frame = 1 Query: 4 DARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAR-----------------------EWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885 DARADGD+LW+ + +GW +KP+GLC+ + CVP+P D S + G N+ AF LGR+V+RD S W G + +A S AP+F LPD+ G+MH LS YRGK+VFL +W S+ GC DL VWQ + E +K ++F +I+VA ++ G++ EW A P YP LID EH +ADLY M NVP AVWIDE GQ+VRPAE AG D +R + + ++P+ + +R YVDA+RDW +GA S Y + + A P++ A AH R HL + G E Sbjct: 16 DARADGDQLWVSPDELEVVSGWIVKPQGLCKTDACVPLPA-DGSWRDAEGRINLVAFAERLGRSVVRDEEHSIWAFGESVGAHLSATLSAEAPEFTLPDLEGKMHSLSTYRGKKVFLYSWGSYCGCSFDLPVWQVIYEELKDQNFEIISVALDTAGSDAVEARIHPDLAERPEVMQRLRGWSDDEWSRQAAPAYPCLIDEEHVIADLYGMTNVPMAVWIDEAGQVVRPAEPAGVSDHFRRLDAETFAIPDEDATSLQANRRLYVDALRDWVQKGAKSEYVLSTDEVVARTRRPSENDVRAAAHVRIARHLYQEGASE 331
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A5B8U2M6_9ACTN (TlpA family protein disulfide reductase n=1 Tax=Baekduia soli TaxID=496014 RepID=A0A5B8U2M6_9ACTN) HSP 1 Score: 231 bits (588), Expect = 8.180e-70 Identity = 133/321 (41.43%), Postives = 173/321 (53.89%), Query Frame = 1 Query: 1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETARE--------------------------WIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885 A A ADGD LWL + +ATGW+++PEGLC G+ CVP+P D S +AG ++ AF LGR V D + W G+ A + AA S APDF LPD+ G +H LSD+RG +V L W S+ GC LDL VW+ L E ++ ++AVA ++ GA R W A PTYP LID H + LY +VNVP AVWIDE G IVRPAE AG D R R+ + ++P+ V YVDAVRDWA +GA S +A P + P + + A AH R G++L +G VE Sbjct: 18 AAAVADGDRLWLAPGDLAAATGWSLEPEGLCHGQACVPLPA-DGSWRDAAGRVDLTAFAARLGRPVACDEQHAIWAFGAPARDDAAGPPSAQAPDFTLPDLHGTLHALSDHRGTKVLLLAWGSYCGCSLDLPVWRVLHEELRPLGLQIVAVAMDAGGAAAVRASVRPTPDELAGRDEILRRMTGWSEDLWNAKAAPTYPCLIDEAHVLGPLYGIVNVPTAVWIDEEGTIVRPAEPAGHSDYMRRRDLETWAIPDEDVDRLVANHTVYVDAVRDWAARGADSPFALAPEEVCRRRRRPGEAESRAAAHARIGWYLFGAGDVE 337
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A523NYH1_9PROT (TlpA family protein disulfide reductase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NYH1_9PROT) HSP 1 Score: 219 bits (558), Expect = 1.300e-67 Identity = 105/156 (67.31%), Postives = 130/156 (83.33%), Query Frame = 1 Query: 421 VKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888 VK +DFI+IAVAEESRGA+TARE+I+ A+PTY LIDREHHVADLYNMVNVPQ+VWIDEHG+IVRP ETAGSHD+WRA NR+D SLP+ + A+ +A+ YV+AVRDWA+ GAAS++ F QARAHL LP+ +ALANA+FR G +L + GK +E Sbjct: 5 VKDQDFIIIAVAEESRGAQTAREFIDEAKPTYVTLIDREHHVADLYNMVNVPQSVWIDEHGRIVRPTETAGSHDSWRAMNREDMSLPDESAAIIAKAQETYVNAVRDWAINGAASKHVFNREQARAHLQLPDANVALANANFRLGRYLHDQGKTDE 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13007.1.1 >prot_P-wetherbeei_contig13007.1.1 ID=prot_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAback to top mRNA from alignment at P-wetherbeei_contig13007:5..895- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13007.1.1 ID=mRNA_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:5..895- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13007:5..895- >mRNA_P-wetherbeei_contig13007.1.1 ID=mRNA_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:5..895- (Phaeothamnion wetherbeei SAG_119_79)back to top |