mRNA_P-wetherbeei_contig13007.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13007.1.1
Unique NamemRNA_P-wetherbeei_contig13007.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001CCE6566 (TlpA family protein disulfide reductase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE6566)

HSP 1 Score: 301 bits (770), Expect = 8.010e-98
Identity = 152/294 (51.70%), Postives = 192/294 (65.31%), Query Frame = 1
Query:    7 ARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            A  DGD LWL    +  ATGW  KP GLC+GE CVP+PR    R+      + A  WR  G  V+R   G  W+LG  A+ RA+ALTSL APDFELP++ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L EA +     V+A+A +   A  AR W+E A P YP LIDR+H  A+LYN+VNVPQAVWIDE G++VRP ETAG  D++R  +R   ++P  A    ++ K AY+DAVRDWAV+GAAS YA       A L +P+  IA A+AHFR G  L   G+  E
Sbjct:   16 ATVDGDALWLDRDELERATGWLWKPHGLCRGETCVPIPRGTDRRWVDGDRLDAAGLWRYAGWPVVRSGSGDIWVLGEGASSRASALTSLEAPDFELPELDGRLHRLSDYRGRKVFLVTWASWCGCRADLPVWQSLYEATREHGLTVLAIALDQPDA--ARPWLETASPGYPCLIDRDHLTAELYNLVNVPQAVWIDEAGRMVRPPETAGMTDSFRRMDRKSFTMPPEAQENRQRVKTAYLDAVRDWAVRGAASPYALDAEAVMARLTVPDAAIAEAHAHFRLGQALVRDGQTAE 307          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A4Q6A5T4_9DELT (TlpA family protein disulfide reductase n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q6A5T4_9DELT)

HSP 1 Score: 296 bits (759), Expect = 2.830e-95
Identity = 151/296 (51.01%), Postives = 197/296 (66.55%), Query Frame = 1
Query:    1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            A+A ADGD LWL    + S TGW  KP GLC+ + C+P PR D +        ++A  WR     V+  R GS W+LG  A+ RAAALTSL APDF LPD+ G++HRLSD+RG++VFL TW+SW GCR DL VW +L E+ +   F V+A+A +  G + AR WIE A P YP LIDR+H  A+LYN+VNVPQAVWIDE G++VRP E+AG  D++RA +R   ++PES     ++AK AY+DAVRDWAV+G+AS YA       A L +P+   A A+AHFR G  L   G+ +E
Sbjct:   70 ANATADGDALWLDKGELESVTGWLWKPVGLCRDDTCMPFPRGDRTLVDG-DRIDVAGVWRHAEWPVVHSRSGSLWVLGEGASRRAAALTSLEAPDFALPDLDGRLHRLSDHRGRKVFLVTWASWCGCRADLPVWNSLYESAREHGFTVLAIALD--GPDAARPWIEAASPGYPCLIDRDHLTANLYNLVNVPQAVWIDEAGRMVRPPESAGMTDSFRAMDRQSFAMPESVREARDRAKAAYLDAVRDWAVRGSASPYALDAEAVMARLTVPDAASAEAHAHFRLGQALLRDGQADE 362          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001F2E0BBF (redoxin domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2E0BBF)

HSP 1 Score: 294 bits (752), Expect = 4.940e-95
Identity = 151/294 (51.36%), Postives = 195/294 (66.33%), Query Frame = 1
Query:    7 ARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            A ADGD LWL    +  ATGW  KPEGLC+GE C+P+PR +  R  +    ++A  WR  G  V+  R G+ W+LG  A+ RAAALTSL APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L E ++     V+AVA +   A  AR W+E A P YP LIDR+H  A+ YN+VNVPQAVWIDE G +VRP E AG  D++RA +R   ++PE+A    ++ K AY+DAVRDWA +G AS YA       A L +P+  I+ A+AHFR G  L   G+ +E
Sbjct:   19 ATADGDALWLDMGELERATGWLWKPEGLCRGETCMPIPRGNR-RLVAGERLDVAGVWRQAGWPVVHSRSGNLWVLGEDASRRAAALTSLQAPDFVLPDLEGRLHRLSDYRGRKVFLVTWASWCGCRGDLPVWQSLHETIEKHGGTVLAVALDQPDA--ARPWLEAASPGYPCLIDRDHLTAESYNLVNVPQAVWIDETGHMVRPPEPAGMTDSFRAMDRKSFAMPEAAREARDRTKAAYLDAVRDWAARGRASPYALDEKAVMARLTVPDVGISEAHAHFRLGQALLREGQADE 309          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A7Y6XA84_9DELT (TlpA family protein disulfide reductase n=2 Tax=Myxococcus TaxID=32 RepID=A0A7Y6XA84_9DELT)

HSP 1 Score: 291 bits (746), Expect = 4.240e-94
Identity = 152/296 (51.35%), Postives = 191/296 (64.53%), Query Frame = 1
Query:   16 DGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRK-----DASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            DGD LWL       ATGW  K  GLC+ + C+P+PR      D  R  +AG       WR  G  V++ R G+ W+LG  A+ RAAALTSL APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR DL VWQ+L E  K   F V+A+A +   A  AR WIE A P+YP LIDR+H  A+LYN+VNVPQAVWIDE G +VRP E AG  D +RA  R   S+PE+A    ++AK AY+DAVRDW+V+G+AS YA       A L +P+  IA A+A FR G  L   G+ +E
Sbjct:   22 DGDSLWLDKEDFERATGWQWKAVGLCRDDTCMPIPRGGPKLVDGDRIDAAGV------WRHAGWPVVQSRSGTLWVLGEGASRRAAALTSLDAPDFALPDLDGRLHRLSDYRGRKVFLVTWASWCGCRGDLPVWQSLHETAKAHGFTVLAIALDQPDA--ARPWIEAASPSYPCLIDRDHLTAELYNLVNVPQAVWIDEAGHLVRPPEAAGMTDGFRAMERKSLSMPEAAREARDRAKAAYLDAVRDWSVRGSASPYALDAEGVMARLTVPDAAIAEAHARFRLGQALLRDGQADE 309          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI00202328E1 (redoxin domain-containing protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI00202328E1)

HSP 1 Score: 289 bits (740), Expect = 3.210e-93
Identity = 153/301 (50.83%), Postives = 198/301 (65.78%), Query Frame = 1
Query:    1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVP---RKDASRYSSAGTT---NIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885
            ADA+A+GD LWL    + +ATGW  KPEGLC G++C+PVP   R    R  +AG     N+AA WR  G+ V+ D  G NW+LG+ AA+RA AL SL APDF LPD+ GQ H LS YRG+++ L TW+SW GCRLDL++WQ++   ++  +F V+A+A ++  AE AR WIE A P+YP LID +HHVA LY +VNVPQAVWIDE G+IVRP ETAGS DA+R+ +R   +L       S+Q K AY+ AVRDWA QG AS +A    QA A     +   A A+A F  G  L   G+ +
Sbjct:   14 ADAQAEGDALWLTATDIEAATGWQWKPEGLCHGDVCMPVPPAQRAQWVREEAAGQPARLNLAALWRHGGQPVVHDGSGRNWVLGTGAAQRAEALQSLQAPDFTLPDLQGQPHSLSQYRGRKLLLVTWASWCGCRLDLALWQSMMNELQDTNFTVLAIALDT--AEAARPWIEAAAPSYPCLIDADHHVAALYGIVNVPQAVWIDEAGRIVRPTETAGSSDAFRSIDRSTGALAPELAQASQQRKAAYLAAVRDWARQGPASAHALPAPQAAARXXXXSAAQAEAHAWFLLGQQLLRQGQAD 312          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A0S9NH76_9BURK (Thioredoxin domain-containing protein n=1 Tax=Pseudorhodoferax sp. Leaf274 TaxID=1736318 RepID=A0A0S9NH76_9BURK)

HSP 1 Score: 288 bits (738), Expect = 5.690e-93
Identity = 148/291 (50.86%), Postives = 190/291 (65.29%), Query Frame = 1
Query:   28 LWLRNAAVTSATGWTMKPEGLCQGEICVPVP---RKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEEG 891
            LWL  + V +ATGW  KP+GLC+G  C+P+P                ++AAFWR LG   + D  G+ W+LG  A  +AAA  SL APDFELPD++G+MHRLSD RG+RVF+ TW+SW GCR+DL++WQAL  +     F V+A+A +   A +AR WIE A PT+P LID EH VA  YN+VNVPQAVWIDE G+IVRP E+AGS D  R R+R   ++PE+ VA     K  Y+DAVRDWA  GAASR+A  P + R  L  P+  IA A+A FR G  L  +G+  +G
Sbjct:   22 LWLDASQVHAATGWEWKPQGLCRGAACMPIPPAGHGGGQALVDGARLDLAAFWRHLGWPAVHDDAGALWVLGEGADSQAAAWESLQAPDFELPDLAGRMHRLSDLRGQRVFMATWASWCGCRVDLALWQALQASAGAHGFTVLAIALDD--AASARPWIEAAAPTFPCLIDAEHLVAQRYNLVNVPQAVWIDEEGRIVRPPESAGSTDGLRERDRQTNAMPEAVVARRAAIKATYLDAVRDWAEHGAASRHALAPQEVRRRLQRPDAAIAEAHARFRLGQSLLRAGQEAQG 310          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: UPI001A30A18D (Redoxin domain-containing protein n=1 Tax=Myxococcaceae bacterium JPH2 TaxID=2799617 RepID=UPI001A30A18D)

HSP 1 Score: 287 bits (735), Expect = 1.670e-92
Identity = 150/301 (49.83%), Postives = 194/301 (64.45%), Query Frame = 1
Query:    1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRK-----DASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            A A  DGD LWL    +  ATGW  KP GLC+ + C+P PR      D  R  +AG       WR  G  V+  R G  W+LG  A+ RAAALTSL+APDF LPD+ G++HRLSDYRG++VFL TW+SW GCR +L VWQ+L +A K   F V+AVA +   A  AR WIE A P YP LIDR+H +A+LYN+VNVPQAVWID+ GQ+VRP E+AG  D++R  +R   ++PE A    ++ K AY+ AVRDWAV+G+AS Y        + L++P+  I  A+AHFR G  L   G+ +E
Sbjct:   17 ARATVDGDALWLDKGELELATGWLWKPVGLCRDDTCMPFPRGNQNLVDGERIDAAGA------WRHAGWPVVHSRSGKIWVLGEGASRRAAALTSLNAPDFALPDLDGRLHRLSDYRGRKVFLVTWASWCGCRGELPVWQSLHQAAKEHGFTVLAVALDQPDA--ARPWIEAASPGYPCLIDRDHLIAELYNLVNVPQAVWIDDAGQMVRPPESAGMTDSFREMDRKTFAMPEEAREARDRGKAAYLHAVRDWAVRGSASPYTLDAKAVMSRLSVPDAAITEAHAHFRLGQALMRDGQADE 309          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A4R8XKF3_9MICO (TlpA family protein disulfide reductase n=1 Tax=Cryobacterium sp. TMS1-20-1 TaxID=1259223 RepID=A0A4R8XKF3_9MICO)

HSP 1 Score: 246 bits (628), Expect = 7.200e-76
Identity = 130/317 (41.01%), Postives = 178/317 (56.15%), Query Frame = 1
Query:    4 DARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETAR-----------------------EWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885
            DARADGD+LW+    +   +GW +KP+GLC+ + CVP+P  D S   + G  N+ AF   LGR+V+RD   S W  G +     +A  S  AP+F LPD+ G+MH LS YRGK+VFL +W S+ GC  DL VWQ + E +K ++F +I+VA ++ G++                          EW   A P YP LID EH +ADLY M NVP AVWIDE GQ+VRPAE AG  D +R  + +  ++P+      +  +R YVDA+RDW  +GA S Y  +  +  A    P++    A AH R   HL + G  E
Sbjct:   16 DARADGDQLWVSPDELEVVSGWIVKPQGLCKTDACVPLPA-DGSWRDAEGRINLVAFAERLGRSVVRDEEHSIWAFGESVGAHLSATLSAEAPEFTLPDLEGKMHSLSTYRGKKVFLYSWGSYCGCSFDLPVWQVIYEELKDQNFEIISVALDTAGSDAVEARIHPDLAERPEVMQRLRGWSDDEWSRQAAPAYPCLIDEEHVIADLYGMTNVPMAVWIDEAGQVVRPAEPAGVSDHFRRLDAETFAIPDEDATSLQANRRLYVDALRDWVQKGAKSEYVLSTDEVVARTRRPSENDVRAAAHVRIARHLYQEGASE 331          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A5B8U2M6_9ACTN (TlpA family protein disulfide reductase n=1 Tax=Baekduia soli TaxID=496014 RepID=A0A5B8U2M6_9ACTN)

HSP 1 Score: 231 bits (588), Expect = 8.180e-70
Identity = 133/321 (41.43%), Postives = 173/321 (53.89%), Query Frame = 1
Query:    1 ADARADGDELWLRNAAVTSATGWTMKPEGLCQGEICVPVPRKDASRYSSAGTTNIAAFWRLLGRAVLRDRGGSNWLLGSAAAERAAALTSLSAPDFELPDISGQMHRLSDYRGKRVFLTTWSSW*GCRLDLSVWQALSEAVKTEDFIVIAVAEESRGAETARE--------------------------WIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVE 885
            A A ADGD LWL    + +ATGW+++PEGLC G+ CVP+P  D S   +AG  ++ AF   LGR V  D   + W  G+ A + AA   S  APDF LPD+ G +H LSD+RG +V L  W S+ GC LDL VW+ L E ++     ++AVA ++ GA   R                           W   A PTYP LID  H +  LY +VNVP AVWIDE G IVRPAE AG  D  R R+ +  ++P+  V         YVDAVRDWA +GA S +A  P +       P +  + A AH R G++L  +G VE
Sbjct:   18 AAAVADGDRLWLAPGDLAAATGWSLEPEGLCHGQACVPLPA-DGSWRDAAGRVDLTAFAARLGRPVACDEQHAIWAFGAPARDDAAGPPSAQAPDFTLPDLHGTLHALSDHRGTKVLLLAWGSYCGCSLDLPVWRVLHEELRPLGLQIVAVAMDAGGAAAVRASVRPTPDELAGRDEILRRMTGWSEDLWNAKAAPTYPCLIDEAHVLGPLYGIVNVPTAVWIDEEGTIVRPAEPAGHSDYMRRRDLETWAIPDEDVDRLVANHTVYVDAVRDWAARGADSPFALAPEEVCRRRRRPGEAESRAAAHARIGWYLFGAGDVE 337          
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Match: A0A523NYH1_9PROT (TlpA family protein disulfide reductase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NYH1_9PROT)

HSP 1 Score: 219 bits (558), Expect = 1.300e-67
Identity = 105/156 (67.31%), Postives = 130/156 (83.33%), Query Frame = 1
Query:  421 VKTEDFIVIAVAEESRGAETAREWIELAQPTYPVLIDREHHVADLYNMVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQAKRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFHLRESGKVEE 888
            VK +DFI+IAVAEESRGA+TARE+I+ A+PTY  LIDREHHVADLYNMVNVPQ+VWIDEHG+IVRP ETAGSHD+WRA NR+D SLP+ + A+  +A+  YV+AVRDWA+ GAAS++ F   QARAHL LP+  +ALANA+FR G +L + GK +E
Sbjct:    5 VKDQDFIIIAVAEESRGAQTAREFIDEAKPTYVTLIDREHHVADLYNMVNVPQSVWIDEHGRIVRPTETAGSHDSWRAMNREDMSLPDESAAIIAKAQETYVNAVRDWAINGAASKHVFNREQARAHLQLPDANVALANANFRLGRYLHDQGKTDE 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13007.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CCE65668.010e-9851.70TlpA family protein disulfide reductase n=1 Tax=Cy... [more]
A0A4Q6A5T4_9DELT2.830e-9551.01TlpA family protein disulfide reductase n=1 Tax=My... [more]
UPI001F2E0BBF4.940e-9551.36redoxin domain-containing protein n=1 Tax=Myxococc... [more]
A0A7Y6XA84_9DELT4.240e-9451.35TlpA family protein disulfide reductase n=2 Tax=My... [more]
UPI00202328E13.210e-9350.83redoxin domain-containing protein n=1 Tax=Aquincol... [more]
A0A0S9NH76_9BURK5.690e-9350.86Thioredoxin domain-containing protein n=1 Tax=Pseu... [more]
UPI001A30A18D1.670e-9249.83Redoxin domain-containing protein n=1 Tax=Myxococc... [more]
A0A4R8XKF3_9MICO7.200e-7641.01TlpA family protein disulfide reductase n=1 Tax=Cr... [more]
A0A5B8U2M6_9ACTN8.180e-7041.43TlpA family protein disulfide reductase n=1 Tax=Ba... [more]
A0A523NYH1_9PROT1.300e-6767.31TlpA family protein disulfide reductase n=2 Tax=Pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13007contigP-wetherbeei_contig13007:5..895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000038_gene1692
Model size891
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.74e-20
EggNOG OGsCOG0526@1|root,COG0526@2|Bacteria,1P3KS@1224|Proteobacteria
DescriptionCOG0526, thiol-disulfide isomerase and thioredoxins
Cds size330
COG categoryCO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185970.535671-CDS-P-wetherbeei_contig13007:4..3341683185970.535671-CDS-P-wetherbeei_contig13007:4..334Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13007 5..334 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185970.545607-UTR-P-wetherbeei_contig13007:334..8951683185970.545607-UTR-P-wetherbeei_contig13007:334..895Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13007 335..895 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13007.1.1prot_P-wetherbeei_contig13007.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13007 5..334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13007.1.1

>prot_P-wetherbeei_contig13007.1.1 ID=prot_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
MVNVPQAVWIDEHGQIVRPAETAGSHDAWRARNRDDRSLPESAVALSEQA
KRAYVDAVRDWAVQGAASRYAFTPAQARAHLALPNDKIALANAHFRFGFH
LRESGKVEEG
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mRNA from alignment at P-wetherbeei_contig13007:5..895-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13007.1.1 ID=mRNA_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:5..895- (Phaeothamnion wetherbeei SAG_119_79)
GCGGATGCACGCGCCGACGGTGATGAGTTGTGGTTGAGAAATGCCGCAGT CACCAGCGCTACCGGCTGGACCATGAAACCTGAGGGTCTATGTCAGGGCG AGATCTGTGTGCCGGTGCCACGCAAGGACGCGTCGCGCTACAGCAGCGCA GGCACGACCAATATCGCCGCCTTCTGGCGCTTGCTCGGTCGCGCAGTACT GCGTGACCGTGGCGGCAGCAACTGGCTGCTGGGCAGTGCCGCCGCCGAGC GCGCCGCGGCACTCACCAGCCTCAGCGCGCCGGATTTCGAACTGCCCGAT ATCAGTGGCCAGATGCATCGTCTGTCGGACTATCGCGGCAAGCGCGTATT TCTCACTACCTGGTCCAGTTGGTGAGGCTGCCGTCTTGACCTGTCCGTGT GGCAGGCATTGAGCGAAGCAGTAAAGACCGAGGACTTCATCGTCATCGCG GTCGCGGAGGAATCCCGTGGCGCCGAGACAGCGCGTGAATGGATAGAGCT TGCGCAGCCGACCTATCCGGTCCTGATCGACCGCGAGCATCATGTCGCCG ATCTCTACAACATGGTCAACGTGCCGCAGGCGGTATGGATAGATGAACAC GGGCAGATAGTGCGGCCGGCCGAGACCGCCGGCTCGCACGATGCCTGGCG TGCACGTAATCGTGACGACCGCAGCTTGCCGGAATCCGCCGTCGCGCTCT CCGAACAGGCCAAACGCGCCTATGTGGACGCGGTGCGCGACTGGGCAGTG CAAGGGGCCGCCAGTCGCTATGCATTCACACCCGCCCAGGCGCGTGCGCA TCTGGCCTTGCCCAATGACAAGATTGCGCTCGCCAACGCCCATTTCCGCT TTGGCTTTCATCTGCGCGAGAGTGGCAAGGTCGAAGAAGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13007:5..895-

>mRNA_P-wetherbeei_contig13007.1.1 ID=mRNA_P-wetherbeei_contig13007.1.1|Name=mRNA_P-wetherbeei_contig13007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig13007:5..895- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAACGTGCCGCAGGCGGTATGGATAGATGAACACGGGCAGATAGT
GCGGCCGGCCGAGACCGCCGGCTCGCACGATGCCTGGCGTGCACGTAATC
GTGACGACCGCAGCTTGCCGGAATCCGCCGTCGCGCTCTCCGAACAGGCC
AAACGCGCCTATGTGGACGCGGTGCGCGACTGGGCAGTGCAAGGGGCCGC
CAGTCGCTATGCATTCACACCCGCCCAGGCGCGTGCGCATCTGGCCTTGC
CCAATGACAAGATTGCGCTCGCCAACGCCCATTTCCGCTTTGGCTTTCAT
CTGCGCGAGAGTGGCAAGGTCGAAGAAGGT
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