mRNA_P-wetherbeei_contig130.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: A0A7S4A172_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A172_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.960e-26 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 7 DRSPIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQ--AASRSLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQS 273 D P+I+V+FT L+ GRIHN+FD +CNDPE KS AK+I DY+ A+ LI+ G A G S WR A+A+LR + PG FFAPVFPP S Sbjct: 56 DDKPLILVNFTKLSKGRIHNKFDPNACNDPEAKSALAKRIGEDYERYASDAELIASGDVRASGTSCWRAALAELRKERPGQFFAPVFPPPS 146
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: A0A7S1ZJ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZJ12_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.010e-22 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 16 PIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQAASR--SLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQ 270 PIIIVD T + S IH+RFD+ S ND S + K+I ++Y+ +R SLIS G CG+SVWRDA+ +LRD+ PGH+F P+FPP+ Sbjct: 74 PIIIVDITQIDSN-IHSRFDRNSVNDSAAASSQRKKIESNYEQYARDSSLISVGTVIPCGSSVWRDAIIRLRDERPGHYFVPIFPPK 159
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: A0A7S1BKV3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKV3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.550e-20 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 1 EDDRSPIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQAA--SRSLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQ 270 + + P++IVDFT LT G+IH++ DK S NDP+ S K+I A Y+ L+S G CG++VWR A+ LRD+ GH+F PVFPP+ Sbjct: 74 DGEGEPMLIVDFTDLTDGKIHSKHDKNSVNDPDAASSLRKKIEASYETYRDDTKLLSSGTIRPCGSTVWRSALIALRDERRGHYFCPVFPPK 165
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: A0A7S4HN14_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN14_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.500e-18 Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 4 DDRSPIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQ--AASRSLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQ 270 D P+IIVD T L+ ++H+RFDK S ND S K + Y+ A + L++ G CG +VWR A+ KLR+D PGH+F+P+FPP+ Sbjct: 77 DGGEPMIIVDMTNLSHEQLHSRFDKNSVNDSAAASELRKAVEGKYEEYAKNADLLAQGTIIPCGTTVWRMALVKLREDRPGHYFSPIFPPK 167
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: B7GBC0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBC0_PHATC) HSP 1 Score: 82.8 bits (203), Expect = 6.830e-18 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 16 PIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQAAS--RSLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQ 270 P++I D T L++ IH++FD S ND E S KQI +Y+ S + ++ G CG+SVWR A+ +LR D PGH+FAP+FPP+ Sbjct: 76 PMVIADLTMLSNCGIHSKFDHHSVNDSEASSKLRKQIEQNYREYSLRQEYLANGSIVPCGSSVWRSALVELRQDRPGHYFAPIFPPK 162
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Match: A0A7S0UNP6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UNP6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.940e-18 Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 4 DDRSPIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQ--AASRSLISCGHAFACGASVWRDAVAKLRDDNPGHFFAPVFPPQS 273 +D +IIVD T L IH++FD+ S N PE S K+I Y A S L+S G CG SVWRDA+ +LRDD PGH+F P+F P++ Sbjct: 62 EDGESMIIVDITQLNPD-IHSKFDRNSVNKPEEASALRKKIEKSYDEYAFSNDLLSEGTIIPCGTSVWRDALVRLRDDRPGHYFVPIFAPKA 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig130.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig130.4.1 >prot_P-wetherbeei_contig130.4.1 ID=prot_P-wetherbeei_contig130.4.1|Name=mRNA_P-wetherbeei_contig130.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp EDDRSPIIIVDFTALTSGRIHNRFDKFSCNDPELKSGEAKQIAADYQAASback to top mRNA from alignment at P-wetherbeei_contig130:2929..3308- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig130.4.1 ID=mRNA_P-wetherbeei_contig130.4.1|Name=mRNA_P-wetherbeei_contig130.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=380bp|location=Sequence derived from alignment at P-wetherbeei_contig130:2929..3308- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig130:2929..3308- >mRNA_P-wetherbeei_contig130.4.1 ID=mRNA_P-wetherbeei_contig130.4.1|Name=mRNA_P-wetherbeei_contig130.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig130:2929..3308- (Phaeothamnion wetherbeei SAG_119_79)back to top |