mRNA_P-wetherbeei_contig12997.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A836CE53_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE53_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.980e-22 Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHF 216 +V GFP+K+AALQFEWAWQHP+KDRH++G+VGA+ + R G + KL + KA++ L PW +YGL HF Sbjct: 40 VVTGFPSKSAALQFEWAWQHPYKDRHVKGKVGALALKGRGSYGLKAKLAICKALMCLEPWCRYGLGTHF 108
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A0L0T8M2_ALLM3 (Structure-specific endonuclease subunit SLX1 n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T8M2_ALLM3) HSP 1 Score: 82.4 bits (202), Expect = 6.780e-15 Identity = 59/184 (32.07%), Postives = 83/184 (45.11%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPE------RRQDGGIKRRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAVRCPHCACRNHVLCLGRTFLAAEGATWQLLPRGGTCPVDKCGMWLAWSSLAQSA 543 V GFPNK AALQFEWAWQ+P RH++ +P +A +V P L L ++L +S++ L VH SP RR +G L + ++ + + AC VC GD V CP CA H++C + G LLP G C +C + W +L + A Sbjct: 62 FVHGFPNKLAALQFEWAWQNPLSSRHMKHNTAPLPKNANRMVRVHPCLTSLASLLTAPLFSRWPLHVHVVSPTWLATVTSTLHLAPHRRLTSGPL----TATKSLPPIPI---VGACRVCRTHVGDGDMGVECPWCAAVAHLVCWANAWRKGSG---MLLPVTGPC--IRCETEIEWGALVREA 233
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A1X6MKG4_9APHY (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Postia placenta MAD-698-R-SB12 TaxID=670580 RepID=A0A1X6MKG4_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 1.080e-13 Identity = 55/175 (31.43%), Postives = 79/175 (45.14%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVG-AVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPERRQDGGIKRRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAVRCPHCACRNHVLCLGRTFLAAEGATWQLLPRGGTCPVDKCGMWLAWSSL 531 IV GFP+K AALQFEWAWQHP RH+R G AV + + + + ++M+ P+S + L V + E K + A L +S A A A+C P C +H+LCL +FL + Q++PRGG C CG ++ W + Sbjct: 77 IVHGFPSKLAALQFEWAWQHPHISRHLRDNDGQAVFSESNRRKNLKSNVSVARSMICSHPYSTWPLRVALFTEEAS-----KAWKDASTSL-----------ISKNADPLATALCPTPG-----------CHAVSHLLCLSESFLRLTSSNKQVIPRGGEC--SSCGSYVLWGDV 222
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A7S0H775_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H775_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-13 Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 4 LAIVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPE 228 + +V GFPNKTA LQFEWAWQHP + R ++ S R G + K+ +L ML LLPW Y L VHFTS E Sbjct: 59 VVVVHGFPNKTAGLQFEWAWQHPKRSRLVKRAFH----SKRAPYGVKGKIKILHEMLNLLPWRNYPLHVHFTSTE 129
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A0D7BKT9_9AGAR (Structure-specific endonuclease subunit SLX1 n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BKT9_9AGAR) HSP 1 Score: 77.4 bits (189), Expect = 2.790e-13 Identity = 60/183 (32.79%), Postives = 85/183 (46.45%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVH-FTSPERRQDGGIKRRRRAGVLLPGGSGSRG--AKDMSLGAGAAACAVCDE--PFRAGDTAVRCPHCACRNHVLCLGRTFLAAE-GATWQLLPRGGTCPVDKCGMWLAWSSLAQS 540 +V GFP+K AALQFEWAWQHP RH++ + + + L M+ P+ L V FT +R + L PGG + +K L + +C+VC P TAV CP+C +H+ CL FL E + ++LPRGGTC CG + W L ++ Sbjct: 64 LVHGFPSKQAALQFEWAWQHPHISRHLKSKASKGRTLTQHIKN-------LHIMVGSHPFDVQPLRVTIFTDVAQRLWNKLPPSNTTTTLNPGGPAAVDITSKTPHLTPSSDSCSVCSTALPPDPLSTAV-CPNCRLPSHLPCLASRFLREEDNGSRRMLPRGGTCA--GCGSYTLWGDLVRA 236
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A8H7P392_9APHY (Structure-specific endonuclease subunit SLX1 n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7P392_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 7.680e-13 Identity = 55/175 (31.43%), Postives = 79/175 (45.14%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVG-AVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPERRQDGGIKRRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAVRCPHCACRNHVLCLGRTFLAAEGATWQLLPRGGTCPVDKCGMWLAWSSL 531 IV GFP+K AALQFEWAWQHP RH+R G AV + + + + ++M+ P+S + L V + E K + A L +S A A A+C P C +H+LCL +FL + Q++PRGG C CG ++ W + Sbjct: 77 IVHGFPSKLAALQFEWAWQHPHISRHLRDNDGQAVFSESNRRKNLKSNVSVARSMICSHPYSTWPLRVALFTEEAS-----KAWKDASTSL-----------ISKNADPLATALCPTPG-----------CHAVSHLLCLSESFLRPTSSNKQVIPRGGEC--SSCGSYVLWGDV 222
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A0C3PTG4_PHLGI (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PTG4_PHLGI) HSP 1 Score: 73.2 bits (178), Expect = 1.980e-12 Identity = 55/179 (30.73%), Postives = 81/179 (45.25%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPERRQDGGIKRRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAVRCPHCACRN--HVLCLGRTFLAAEGATWQ---LLPRGGTCPVDKCGMWLAWSSL 531 +V GFP+K AALQFEWAWQHPW+ RH+R + + R ++ + ML P++ + L V + + S+ D+S G D P DTA+ CP AC + H+ CL + F+ A A+ L+PRGG CP C ++ W + Sbjct: 72 VVHGFPSKLAALQFEWAWQHPWRSRHLRDEGRQRFARSARLNYLRQRVGVAHGMLCSHPYNTWPLHVKLFTEDA---------------------SKIWHDLSRRIG-----PIDNPL---DTAL-CPAPACTSLAHLACLAKHFILASAASESIPSLIPRGGPCP--SCRTYILWGDV 218
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A8C5F281_9SAUR (Structure-specific endonuclease subunit SLX1 n=1 Tax=Gopherus evgoodei TaxID=1825980 RepID=A0A8C5F281_9SAUR) HSP 1 Score: 71.2 bits (173), Expect = 1.960e-11 Identity = 70/206 (33.98%), Postives = 81/206 (39.32%), Query Frame = 1 Query: 10 IVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPERRQD---------------GGIK---RRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAVRC--PHCACRNHVLCLGRTFLAAEGATWQLLPRGGTCPVDKCGMWLAWSSLAQSAAACCDDQE 567 I+ GFP+ AALQFEWAWQHP H R+ V AR L +L ML + PW + L V + P RQD G ++ R R G G G GA G VC D +RC P C H CL R FL E QLLP G CP C L W L + C D E Sbjct: 63 IIHGFPSDVAALQFEWAWQHP----HTSRRLCHVSRRARRETRFDFHLRVLAHMLRVAPWCRLPLTVRWLEPGYRQDFPPALQPPLHMPLAFGQVRALGRARGPGEREQGEPGEGGAGAWG---GCTLPHVCLPLQDVDDPPLRCFQPGCPLAAHPACLAREFLREEPE--QLLPVEGHCP--GCKNLLLWGDLIRYHQGCYGDLE 257
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A516AG67_LINPO (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG67_LINPO) HSP 1 Score: 71.2 bits (173), Expect = 4.570e-11 Identity = 65/196 (33.16%), Postives = 86/196 (43.88%), Query Frame = 1 Query: 13 VRGFPNKTAALQFEWAWQHPWKDRHIRG---RVGAVPISA----RCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSPERRQDGGIK----RRRRAGVLLPGGSG-------SRGAKDMSLGAGAAACAVCDEPFRAGDTAVRCPHCACRNHVLCLGRTFLAAEGATWQLLPR-GGTCPVDKCGMWLAWSSLAQSA 543 V GFPN+ AALQFE+AWQHP RH+RG ++G V + R V+G + + +L ML P+ L VH K +R + + GS + M +C+ C E FR D V CP C HV C + FL G QL+PR CPV C W +L +SA Sbjct: 57 VYGFPNRIAALQFEFAWQHPAICRHVRGPTEQLGFVQKTRKGRQRVVLGAKRNVQVLLEMLQASPYCGMPLHVHILDQGAYWQMIPKLPAVQRLPKHITMTHGSFDDLEHVCAELMMAMQQPVVGTSCSACGEAFRPQDRLVSCPGCEQPFHVSCAAQAFLGPTGT--QLMPRESAACPV--CKHATDWPTLVRSA 248
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Match: A0A0L0HSB3_SPIPD (Structure-specific endonuclease subunit SLX1 n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HSB3_SPIPD) HSP 1 Score: 71.2 bits (173), Expect = 5.320e-11 Identity = 63/203 (31.03%), Postives = 85/203 (41.87%), Query Frame = 1 Query: 4 LAIVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKLLLLKAMLALLPWSQYGLAVHFTSP-ERRQDGGIKRRRRAGVLLPGGSGSRGAKDMSLGAGAAACAVCDEPFRAGDTAV-------------------RCPHCACRNHVLCLGRTFLAAEGA-------TWQLLPRGGTCPVDKCGMWLAWSSL 531 + +V GFPNK AALQFEWAWQ P RH R + KL +L ML L WS++ L +HFTS G + + + G+ +D+ GA + D P D V +CP A H++CL FL+ E A + +LLP GTCP+ C + L W L Sbjct: 81 VVVVYGFPNKYAALQFEWAWQKPHLSRHFSAAYPGAYKGTRKEMMLPIKLRVLSDMLHLEQWSRWPLNIHFTSTVAASMFGQLPSAPPRHIGIAHGTLVEVGRDIRKEEGALVASKLDMPSIEHDCVVCLESIEIEQPSDWLCCSRDQCPMIA---HLVCLSSWFLSEEAAERLGSDHSSELLPVMGTCPL--CRVPLRWGDL 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12997.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12997.1.1 >prot_P-wetherbeei_contig12997.1.1 ID=prot_P-wetherbeei_contig12997.1.1|Name=mRNA_P-wetherbeei_contig12997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp FLAIVRGFPNKTAALQFEWAWQHPWKDRHIRGRVGAVPISARCVVGTRPKback to top mRNA from alignment at P-wetherbeei_contig12997:484..1374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12997.1.1 ID=mRNA_P-wetherbeei_contig12997.1.1|Name=mRNA_P-wetherbeei_contig12997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig12997:484..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12997:484..1374- >mRNA_P-wetherbeei_contig12997.1.1 ID=mRNA_P-wetherbeei_contig12997.1.1|Name=mRNA_P-wetherbeei_contig12997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig12997:484..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top |