mRNA_P-wetherbeei_contig12987.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12987.2.1
Unique NamemRNA_P-wetherbeei_contig12987.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A140GUP9_9HYPH (Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUP9_9HYPH)

HSP 1 Score: 370 bits (949), Expect = 2.270e-126
Identity = 188/281 (66.90%), Postives = 231/281 (82.21%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFVKPKQ 849
            MNPTVA++AQGAMG+ +GGRLVE+G+ VVTSL GRSE SAKRA A GMVAVSDAE AKADVF+SILPPSDAL LAEKMA +I+ SNHKPIYVDCNAV+PPTK ++GE++ +AG PFVD  IIG PPK G   P +  SG D++K VPLG FGL++R++EGP+GAASA+K SYAGITKGITALG+MM+LAS R GVG+ LR +LE S P F+  F R++P M+ KAYRF GEM+EIADF GEDP A++M+ +F++FY R+AAD EG+ +E  AL  F+KPKQ
Sbjct:    1 MNPTVAVIAQGAMGAGIGGRLVERGLKVVTSLAGRSEGSAKRAAAAGMVAVSDAECAKADVFLSILPPSDALPLAEKMAAMISASNHKPIYVDCNAVSPPTKVQVGEIITRAGSPFVDVGIIGLPPKPGSNGPVLIVSGPDSAKLVPLGDFGLNLRVVEGPVGAASAVKMSYAGITKGITALGSMMMLASMRGGVGEELRAQLERSHPYFMQNFTRAVPEMFDKAYRFVGEMEEIADFVGEDPQAKQMYLAFADFYRRMAADVEGENQETDALRTFLKPKQ 281          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A537SDJ7_9PROT (NAD(P)-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SDJ7_9PROT)

HSP 1 Score: 289 bits (739), Expect = 1.890e-94
Identity = 153/277 (55.23%), Postives = 197/277 (71.12%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            MNP VA++A G MG+AVG RLV+ G+ V+TSL GRS  +++RAKA GM+A +D E A +D  +SILPP DA+ALA++ A  ++ SN KP+YVDCNAV+P + + I   +   G PFVDA IIG PPK     P  YASG +A +FV L  FGLD+R++ GP+ AASALK SYAGITKG  ALGA+M+LA+ R G  DAL  EL+ SQP  LAW  RS+ LM  KAYR+  EM EIADF GEDPA  +++   + FY +IA DFE ++ EV+AL AF+
Sbjct:    1 MNPVVAVIAPGMMGAAVGKRLVDHGLKVLTSLKGRSAETSERAKAAGMIAANDEEIAASDFILSILPPGDAIALAQRFAPALSASNSKPVYVDCNAVSPRSAEHIAAAIAPTGSPFVDAGIIGQPPKGNDAGPRFYASGPEAPRFVALKDFGLDVRVLAGPLSAASALKMSYAGITKGTQALGAVMMLAATRGGTADALFAELQASQPQMLAWLKRSLALMPQKAYRWVAEMHEIADFVGEDPAGHELYLGAAHFYEQIARDFEDERNEVSALEAFL 277          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A537TH66_9PROT (NAD(P)-dependent oxidoreductase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A537TH66_9PROT)

HSP 1 Score: 288 bits (736), Expect = 5.380e-94
Identity = 158/277 (57.04%), Postives = 195/277 (70.40%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            M P VA++A G MG+AVG RLV+ G+ V+TSLTGRS  ++ RAKA GMV+ SD E A AD  +SILPP DA+ALA++  G +  SN KP+YVDCNAV P T +RIG  +   G PFVDA IIG PPKA    P IYASG  A++F  L  FGLDIR++ GP+ AASALK SYAGITKG  ALGA MLLA+ R G  DAL  EL+ SQP  L W  RS+  M  KAYR+  EM EIADF GEDP+A +++   + FY +IA DF  ++++VAAL AF+
Sbjct:    1 MKPLVAVIAPGMMGAAVGKRLVDNGLKVLTSLTGRSAETSARAKAAGMVSASDEEIAAADFILSILPPGDAVALAQRFGGPLTASNSKPVYVDCNAVAPRTAERIGAAIGPTGAPFVDAGIIGAPPKANDAGPRIYASGPHAARFAALKEFGLDIRVLGGPMSAASALKMSYAGITKGTQALGAAMLLAATRGGTADALFAELQGSQPQILTWLKRSLAQMPPKAYRWVAEMHEIADFVGEDPSAHELYLGAAHFYEQIARDFAREKKDVAALDAFL 277          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: UPI0013051917 (NAD(P)-dependent oxidoreductase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0013051917)

HSP 1 Score: 286 bits (731), Expect = 3.080e-93
Identity = 152/277 (54.87%), Postives = 195/277 (70.40%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKA-GYTPAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            M P VA++AQGAMG+ V  RL E G+ V+TSL GRS  SA+RA A GM AV DA  A A++ +SI+PP++A ALAE++A  +A +  KP+Y DCNAV+P T   I EV+   GC F DA IIGGPP+  GYTP  YASG  A+    LGA GLD+R+I GP+GAASALK SYAGITKG+ +LG+ M+LA+ RAG  + L +ELE SQP  LAWF R +P  + KAYR+ GEM+EIA F GE  AA  ++ + + FY ++AAD  G   + AALTAF+
Sbjct:    1 MPPVVAVIAQGAMGAGVARRLAEHGVTVLTSLAGRSPRSAERAAAAGMRAVEDAAIAGAEIILSIVPPAEARALAERLAPHLAAAPRKPLYADCNAVSPETVLGIAEVLAPTGCGFADAGIIGGPPRPDGYTPVFYASGPGAAALAALGARGLDMRVIPGPVGAASALKMSYAGITKGLVSLGSAMMLAAGRAGAAEGLFRELEASQPQLLAWFRRMVPTSFEKAYRWEGEMEEIAGFIGEGDAASGIYRAIARFYAQMAADAAGPNRDTAALTAFL 277          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A6N7GZT6_9HYPH (DUF1932 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZT6_9HYPH)

HSP 1 Score: 284 bits (727), Expect = 1.330e-92
Identity = 152/279 (54.48%), Postives = 197/279 (70.61%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPP--KAGYTPAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFVK 840
            MNP VA+VA G MG+AVGGRLV  G+ V+TSLTGRS+ +  RAK  G+ A +D E A AD  +SILPP DA+ALA++ A  +  SN KP++VDCNA++PPT +R+  V+   G PFVDA IIG PP  K G  P  YASG  A +F  L  FGLD+R++EGP+ AASA+K SYAGITKG  AL A+M+LA+ R G  DAL  EL+ SQP  LA+  R++ +M  KAYR+  EM EIADF GEDPA  +++   + FY ++A DFEG ++EV AL AF++
Sbjct:    1 MNPVVAVVAPGMMGAAVGGRLVAHGLKVLTSLTGRSDETVARAKRAGLSAATDEEIAAADFILSILPPGDAVALAQRFAPALTVSNAKPVFVDCNAISPPTAERVAAVVGPTGSPFVDAGIIGSPPLPKDGAGPRFYASGTHAGRFAELKNFGLDVRVLEGPLTAASAMKMSYAGITKGTQALAAVMMLAATRGGSADALFAELKDSQPQMLAYMQRTLAIMPPKAYRWVAEMHEIADFVGEDPAGHELYSGAAHFYEQVARDFEGDKKEVNALLAFLQ 279          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A6L5FGC9_9HYPH (DUF1932 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGC9_9HYPH)

HSP 1 Score: 282 bits (722), Expect = 8.390e-92
Identity = 150/277 (54.15%), Postives = 189/277 (68.23%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            M P + ++  GAMG+AVG RL E G  V+ +L GRSEAS  RA+A GM    DA+  +A+  +SI+PP +A+A AE+ A ++A S  KP +VDCNAVNP T   +   + + GC FVDA IIGGPPK GY  P  YASG  A  F  L  FGL I L++GP+GAASA+K SYAGITKGITAL A M+LA+ RAG  D LR EL+ SQP  LAWF R IP MY+KAYR+  EMDEIA F GED AA  +F+  +  Y ++A D+ G + E+AAL AF+
Sbjct:    1 MQPVIMIIGAGAMGAAVGRRLAEHGATVMCALAGRSEASVARARAAGMRPAQDAKAGEAEFVLSIIPPGEAVATAERFAPILAVSAKKPTFVDCNAVNPETVAHVAAAIERTGCGFVDAGIIGGPPKEGYKGPTFYASGPRAVDFAGLAQFGLKIHLLDGPVGAASAVKMSYAGITKGITALAAAMMLAASRAGTADDLRAELDQSQPALLAWFDRQIPQMYAKAYRWVAEMDEIAAFVGEDAAAHSIFDGTARVYEQLAQDYAGDKAEIAALEAFL 277          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: UPI001BAD3B8C (DUF1932 domain-containing protein n=1 Tax=Roseomonas soli TaxID=1081025 RepID=UPI001BAD3B8C)

HSP 1 Score: 275 bits (704), Expect = 3.800e-89
Identity = 153/276 (55.43%), Postives = 193/276 (69.93%), Query Frame = 1
Query:   16 PTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAF-GLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            P VA++AQGAMG+ +  RL  QG+ V+T L GRS ASA RA A GM  VS+A  A+AD F+SILPP++ALA AE++A + +G    P+YVDCNAV+P T Q I  ++   G    DA IIGGPP+ GY  P +YASG +A+ F  L A  GLDIR+++GPIGAASALK SYAGITKG+ A+G+ M+LA+ RAG GDALR EL  SQP   AWF R +P M+ KAYR+ GEM+EIADFT ED AA  +++     Y R+A       EEVAAL AF+
Sbjct:    4 PVVAILAQGAMGAGIAARLHAQGVRVLTCLDGRSAASAARAAAAGMEPVSEAGLAEADAFLSILPPAEALATAERLAPVFSGVARPPLYVDCNAVSPATMQGIASLLGVHGLRLADAGIIGGPPREGYAGPVVYASGDEAASFEALLAGRGLDIRVVQGPIGAASALKMSYAGITKGLVAIGSAMMLAASRAGAGDALRAELAASQPALTAWFGRMVPAMFGKAYRWAGEMEEIADFTQEDAAASNIYQGAGALYARLADP--AAAEEVAALRAFL 277          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: UPI001C2BB692 (DUF1932 domain-containing protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2BB692)

HSP 1 Score: 272 bits (696), Expect = 6.180e-88
Identity = 148/281 (52.67%), Postives = 194/281 (69.04%), Query Frame = 1
Query:   10 MNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKA-GYTPAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV-KPK 846
            M P VA++AQGAMG+ +  RL E G+ V+T L GRS AS KRA A GM     A  A A + +SILPP+DA  LAE++A  +A +  KP +  CNAV+P T +RI  ++  +G  FVD  IIGGPP+  GYTPA+Y SG +A++   LG  GLDIRL++GP+GAASALK SYAGITKG+ AL + M+LA+ RAG  + L + LE SQP  LAWF R +P MY KAYR+ GEM+EIADF   D  AR  +++ ++FYT++A D  G  E  AAL+AF+ +PK
Sbjct:    1 MPPVVAIIAQGAMGAGIARRLTENGVTVLTWLEGRSPASTKRAAAAGMQGTDLAGIAGAGIILSILPPADAPDLAERLAPHLAAAARKPAFACCNAVSPETVRRIAAILAGSGAAFVDGGIIGGPPRPDGYTPALYLSGPEAARLGVLGRHGLDIRLLDGPVGAASALKMSYAGITKGLVALSSAMMLAATRAGAAEGLFRGLERSQPQLLAWFGRMVPPMYDKAYRWVGEMEEIADFVAPDAGARAAYQAIAQFYTQLAEDAAGPNEATAALSAFLAQPK 281          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A8J2UTN2_9PROT (6-phosphogluconate dehydrogenase n=1 Tax=Siccirubricoccus deserti TaxID=2013562 RepID=A0A8J2UTN2_9PROT)

HSP 1 Score: 269 bits (687), Expect = 1.170e-86
Identity = 142/276 (51.45%), Postives = 193/276 (69.93%), Query Frame = 1
Query:   16 PTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKA-GYTPAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFVK 840
            PT+A++AQGAMG+ +G RL ++G  V+TSL GRSEASA+RA   GM   + AE A AD+F+S+LPP++A A AE +A  +A +  K +Y DCNA++P T   +  ++   G  FVD  IIGGPP+  GYTP +Y SG +A + +PL   GL++RL  G +GAASALK SYAGITKG+ AL + M+LA+ R G  + LR ELE SQP  LAWF R +P MY KAYR+ GEM+EIADFTG + AA  ++++ + FY  +A D  G +E  AAL+AF++
Sbjct:    2 PTIAILAQGAMGAGIGRRLAQRGCTVLTSLAGRSEASARRAAEAGMRDATPAELAGADIFLSVLPPAEAQATAEWLAPALAAAPRKAVYADCNAISPRTALLVAGIIAPTGAGFVDGGIIGGPPREDGYTPVLYVSGEEAGRLMPLNDHGLEVRLTPGGVGAASALKMSYAGITKGLVALASAMILAAGRNGAAEGLRAELERSQPQLLAWFGRMVPPMYDKAYRWVGEMEEIADFTGPEAAA--IYQAIAGFYATMATDNAGPKEATAALSAFLR 275          
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Match: A0A1Q7BTV3_9PROT (6-phosphogluconate dehydrogenase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BTV3_9PROT)

HSP 1 Score: 268 bits (686), Expect = 1.370e-86
Identity = 147/265 (55.47%), Postives = 183/265 (69.06%), Query Frame = 1
Query:   46 MGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVGMVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAVNPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYT-PAIYASGGDASKFVPLGAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDALRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKMFESFSEFYTRIAADFEGKQEEVAALTAFV 837
            MG+AVG RLV+ G+ V+TSL GRS  +  RAKA GM+A SD E   AD  +SILPP DA+ALA++    +  SN KP+YVDCNAV+P T +RI  V+   G PFVDA IIG PPKA    P  YASG  A +F  L  +GLD+R++ GP+ AASALK SYAGITKG  ALGA M+LA+ R G  DAL  EL+ SQP  LAW  R + LM  KAYR+  EM EIADF GEDP+A +++   + FY +IA DFE  +++VAAL AF+
Sbjct:    1 MGAAVGKRLVDHGLKVLTSLKGRSAETTARAKAAGMLAASDEEIVAADFILSILPPGDAVALAQRFQPALTVSNSKPVYVDCNAVSPRTAERIAAVIAPTGSPFVDAGIIGAPPKANDAGPRFYASGPAAPRFAALKDYGLDVRVLGGPMNAASALKMSYAGITKGTQALGAAMMLAATRGGTADALFAELQGSQPQMLAWLKRGLELMPPKAYRWIAEMHEIADFVGEDPSAHELYLGAAHFYEQIARDFESDKKQVAALEAFL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12987.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A140GUP9_9HYPH2.270e-12666.90Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyra... [more]
A0A537SDJ7_9PROT1.890e-9455.23NAD(P)-dependent oxidoreductase n=1 Tax=Alphaprote... [more]
A0A537TH66_9PROT5.380e-9457.04NAD(P)-dependent oxidoreductase n=3 Tax=Proteobact... [more]
UPI00130519173.080e-9354.87NAD(P)-dependent oxidoreductase n=1 Tax=Crenalkali... [more]
A0A6N7GZT6_9HYPH1.330e-9254.48DUF1932 domain-containing protein n=1 Tax=Hyphomic... [more]
A0A6L5FGC9_9HYPH8.390e-9254.15DUF1932 domain-containing protein n=1 Tax=Hyphomic... [more]
UPI001BAD3B8C3.800e-8955.43DUF1932 domain-containing protein n=1 Tax=Roseomon... [more]
UPI001C2BB6926.180e-8852.67DUF1932 domain-containing protein n=1 Tax=Siccirub... [more]
A0A8J2UTN2_9PROT1.170e-8651.456-phosphogluconate dehydrogenase n=1 Tax=Siccirubr... [more]
A0A1Q7BTV3_9PROT1.370e-8655.476-phosphogluconate dehydrogenase n=1 Tax=Alphaprot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12987contigP-wetherbeei_contig12987:797..1648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog196490.AUEZ01000004_gene4059
PFAMsDUF1932,NAD_binding_2
Model size852
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.08e-88
EggNOG OGsCOG2084@1|root,COG2084@2|Bacteria,1MV27@1224|Proteobacteria,2TTCZ@28211|Alphaproteobacteria,3JT36@41294|Bradyrhizobiaceae
DescriptionDomain of unknown function (DUF1932)
Cds size852
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185969.3572502-CDS-P-wetherbeei_contig12987:796..16481683185969.3572502-CDS-P-wetherbeei_contig12987:796..1648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12987 797..1648 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12987.2.1prot_P-wetherbeei_contig12987.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12987 797..1648 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12987.2.1

>prot_P-wetherbeei_contig12987.2.1 ID=prot_P-wetherbeei_contig12987.2.1|Name=mRNA_P-wetherbeei_contig12987.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MNTMNPTVALVAQGAMGSAVGGRLVEQGIHVVTSLTGRSEASAKRAKAVG
MVAVSDAETAKADVFMSILPPSDALALAEKMAGLIAGSNHKPIYVDCNAV
NPPTKQRIGEVMIQAGCPFVDASIIGGPPKAGYTPAIYASGGDASKFVPL
GAFGLDIRLIEGPIGAASALKCSYAGITKGITALGAMMLLASQRAGVGDA
LRKELELSQPGFLAWFVRSIPLMYSKAYRFNGEMDEIADFTGEDPAARKM
FESFSEFYTRIAADFEGKQEEVAALTAFVKPKQ*
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mRNA from alignment at P-wetherbeei_contig12987:797..1648-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12987.2.1 ID=mRNA_P-wetherbeei_contig12987.2.1|Name=mRNA_P-wetherbeei_contig12987.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig12987:797..1648- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACACGATGAATCCCACCGTTGCACTCGTCGCCCAGGGCGCCATGGG AAGCGCCGTCGGCGGCCGCCTGGTCGAGCAGGGCATCCATGTCGTCACGT CGCTGACCGGCCGCAGCGAAGCCAGCGCCAAGCGAGCGAAGGCTGTCGGC ATGGTCGCGGTGTCCGACGCGGAAACCGCCAAGGCCGACGTGTTCATGTC GATCCTGCCGCCGAGCGACGCCCTGGCGCTGGCCGAGAAGATGGCCGGGC TGATCGCCGGTTCCAACCACAAGCCGATCTACGTCGACTGCAACGCGGTC AATCCGCCGACCAAGCAGCGCATCGGCGAGGTCATGATCCAGGCTGGCTG CCCGTTCGTCGATGCCAGCATCATTGGCGGGCCGCCGAAGGCGGGCTACA CGCCGGCGATCTATGCGTCGGGCGGCGATGCCAGCAAGTTCGTGCCGCTC GGCGCCTTCGGTCTCGACATCCGCTTGATCGAAGGCCCGATCGGCGCCGC GTCCGCGCTCAAGTGCTCCTACGCCGGCATCACCAAGGGCATCACCGCGC TTGGCGCCATGATGCTGCTGGCCTCCCAGCGCGCCGGCGTCGGCGATGCG CTGCGCAAGGAACTGGAACTGAGCCAGCCGGGATTCCTGGCCTGGTTCGT GCGCTCGATCCCGCTGATGTACTCGAAGGCCTATCGCTTCAACGGCGAGA TGGACGAGATCGCCGACTTCACCGGCGAGGACCCGGCGGCGCGCAAGATG TTCGAATCCTTCTCCGAGTTCTACACGCGGATCGCTGCCGACTTCGAAGG CAAGCAGGAGGAAGTCGCCGCGCTCACGGCATTCGTCAAGCCGAAGCAGT AG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12987:797..1648-

>mRNA_P-wetherbeei_contig12987.2.1 ID=mRNA_P-wetherbeei_contig12987.2.1|Name=mRNA_P-wetherbeei_contig12987.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig12987:797..1648- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACACGATGAATCCCACCGTTGCACTCGTCGCCCAGGGCGCCATGGG
AAGCGCCGTCGGCGGCCGCCTGGTCGAGCAGGGCATCCATGTCGTCACGT
CGCTGACCGGCCGCAGCGAAGCCAGCGCCAAGCGAGCGAAGGCTGTCGGC
ATGGTCGCGGTGTCCGACGCGGAAACCGCCAAGGCCGACGTGTTCATGTC
GATCCTGCCGCCGAGCGACGCCCTGGCGCTGGCCGAGAAGATGGCCGGGC
TGATCGCCGGTTCCAACCACAAGCCGATCTACGTCGACTGCAACGCGGTC
AATCCGCCGACCAAGCAGCGCATCGGCGAGGTCATGATCCAGGCTGGCTG
CCCGTTCGTCGATGCCAGCATCATTGGCGGGCCGCCGAAGGCGGGCTACA
CGCCGGCGATCTATGCGTCGGGCGGCGATGCCAGCAAGTTCGTGCCGCTC
GGCGCCTTCGGTCTCGACATCCGCTTGATCGAAGGCCCGATCGGCGCCGC
GTCCGCGCTCAAGTGCTCCTACGCCGGCATCACCAAGGGCATCACCGCGC
TTGGCGCCATGATGCTGCTGGCCTCCCAGCGCGCCGGCGTCGGCGATGCG
CTGCGCAAGGAACTGGAACTGAGCCAGCCGGGATTCCTGGCCTGGTTCGT
GCGCTCGATCCCGCTGATGTACTCGAAGGCCTATCGCTTCAACGGCGAGA
TGGACGAGATCGCCGACTTCACCGGCGAGGACCCGGCGGCGCGCAAGATG
TTCGAATCCTTCTCCGAGTTCTACACGCGGATCGCTGCCGACTTCGAAGG
CAAGCAGGAGGAAGTCGCCGCGCTCACGGCATTCGTCAAGCCGAAGCAGT
AG
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