mRNA_P-wetherbeei_contig1298.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1298.1.1
Unique NamemRNA_P-wetherbeei_contig1298.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A836C9L2_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA)

HSP 1 Score: 456 bits (1174), Expect = 1.960e-155
Identity = 252/340 (74.12%), Postives = 281/340 (82.65%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGA-AGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYM 1017
            +E AARED IRR+TLEY A LRQQT+  RVKAETEG ILAER+NHDIR+EQ R+  RESR+TLLE I LAG T+G G  EFL N  EMTAAVVT+SA ALGIYAA+T TGVAGRF+EARLGRPSLVRETSR SAL   RHP + L+    R  A  AL G    G PRAIF   +E RL R+AES+ANT+RNRAP+RHLLL+GPPGTGKTLFAKGLA+ SG+DYAIMTGGD+APLGR AV   HKVFDWA+TSRRGV+LFVDEADAFLRRR+TE  SED RNALNAFLYRTGE +DRFMVVYASNQPEQFD+AINDRIDE+V F+LPG EER RML SYM
Sbjct:  114 EEAAAREDQIRRQTLEYAARLRQQTDQLRVKAETEGGILAERKNHDIRMEQLRQDRRESRQTLLESIRLAGATLGGGASEFLANRQEMTAAVVTLSAAALGIYAAKTGTGVAGRFVEARLGRPSLVRETSRRSALDAARHPWRTLRHVALRGRAGDALAGDIKGGRPRAIFDKALEARLRRVAESSANTRRNRAPFRHLLLYGPPGTGKTLFAKGLAQASGMDYAIMTGGDIAPLGREAVSEMHKVFDWAQTSRRGVVLFVDEADAFLRRRSTEVISEDMRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDELVPFDLPGVEERRRMLDSYM 453          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 4.240e-147
Identity = 232/339 (68.44%), Postives = 278/339 (82.01%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYM 1017
            +EL  +++A+RR+TLEYEA LRQQTELARVKAETEG+I  ERENHD+RLE+ RE A+E R T+LEGI LAG+T+G GL+EFLG+ D+M AA  T++A+ALGIY ART TGVAGR+IEARLG+PSLVRETSR + +Q +R+P+  ++RAF       AL G        +    +E RL R+A+ST NTKRN AP+RHLLL+GPPGTGKTLFAKGLA+HSGL+YAIMTGGD+APLGR AV   HKVFDWA+ SR+G+LLFVDEADAFLRRR TET SED RNALNAFLYRTGE +D+FM+VYASNQPEQFD A+NDRIDEMV F+LPG EER RM+  YM
Sbjct:  167 EELTRKQEAVRRKTLEYEAELRQQTELARVKAETEGKIRQERENHDLRLEEAREGAKEYRDTVLEGIKLAGDTLGAGLQEFLGDKDKMVAATATLTAMALGIYTARTGTGVAGRYIEARLGKPSLVRETSRRTLIQTVRNPIPTIKRAFGMHKVEDALSG-------VVLEKSLETRLSRVAQSTFNTKRNSAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYM 498          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 2.810e-140
Identity = 222/339 (65.49%), Postives = 275/339 (81.12%), Query Frame = 1
Query:   16 LAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYMHQ 1023
            L  R++ ++R+TLEYEA LRQ+TELARVKAETEGRI  ERENHD+RLE+ R  A E R T+LEGI LAGET+G G+K FLG+ ++M AA  T++AVALGIY A+T TGVAGR++EARLG+PSLVRETS+ S  + +++P+ + +RAF       AL G        +  P++E RL R+A+ST NTK+N+AP+RHLLL+GPPGTGKTLFAKGLA+HSGL+YAIMTGGD+APLGR AV   HK+FDWA+ S +G+LLFVDEADAFLRRR+TE  SED RNALNAFLYRTGE +D+FM+VYASNQPEQFD A+NDRIDEMV FELPG +ER RM+  YM++
Sbjct:  155 LVQRQEDLKRKTLEYEAELRQKTELARVKAETEGRIKQERENHDLRLEEARVSAAEYRDTVLEGIKLAGETLGTGIKTFLGDKEKMLAATTTLTAVALGIYTAKTGTGVAGRYLEARLGKPSLVRETSKRSVSEVIKNPIPSFKRAFGFLKPSNALEG-------VVLEPKLETRLSRVAQSTFNTKKNKAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASNKGLLLFVDEADAFLRRRSTERISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFELPGRDERMRMINLYMNK 486          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 3.070e-140
Identity = 231/341 (67.74%), Postives = 276/341 (80.94%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYMHQ 1023
            +E  A+++AI+R+TLEYEA LRQQTELARVKAETEGRI  ER+NHD+R+ Q R  A+E R+T+LEGI LA   +GKGL+EFL + + +T+A VT+SAVALG+YAA+TSTGVAGR+IEARLG+PSLVR+TSR +ALQ LR+PV +L+R      A  AL G        +    +  RL R+A STANTK N AP+R+LLLHGPPGTGKTLFAKGLA +SGLDYAI+TGGDVAPLG+ AV   HKVFDWA T+R+GVLLFVDEADAFLRRR+TE  SE+ RNALNAFLYRTGE SD+FMVV+ASNQPEQFD AINDRIDEMV F LPGEEER  M+T Y+ +
Sbjct:  158 EEYLAKQEAIKRKTLEYEAELRQQTELARVKAETEGRIKQERQNHDLRVAQARAEAKEYRETVLEGIKLASTELGKGLQEFLTDKERLTSAAVTLSAVALGVYAAKTSTGVAGRYIEARLGKPSLVRDTSRRTALQVLRNPVPSLRRLLSTTKAEDALKG-------VVLEKGLTERLTRVAISTANTKANGAPFRNLLLHGPPGTGKTLFAKGLAANSGLDYAILTGGDVAPLGKEAVTEIHKVFDWAGTTRKGVLLFVDEADAFLRRRSTEHMSEELRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVDFNLPGEEERLEMVTIYLEK 491          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 2.590e-137
Identity = 214/338 (63.31%), Postives = 272/338 (80.47%), Query Frame = 1
Query:   13 ELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYM 1017
            ELA R+ A++R+ +E+EA LRQ+TEL RV+ ET+GRI  ER+NHD+RLEQ +  A E R+T+LEGI LAG T+G+G + FL + ++M AAV T+SA+ALG+Y+A+  TGVAGR++EARLG+PSLVRETSR+S L  LR PV  ++R     DA  AL G        +  P++ +RL R+A ST+NTKRN+AP+RHLLL+GPPGTGKT+FAKGLA+ SGL+YAI+TGGDVAPLGR AV   HKVFDWA TS++G+LLF+DE+DAFLR+R+TE  SED RNALNAFLYRTGE +D+FM+VYASNQPEQFD A+NDRIDEMV F+LPG EER RM+  Y+
Sbjct:   86 ELAERQAALKRKNIEHEAKLRQETELKRVEEETKGRIRQERDNHDLRLEQAKLEASEQRQTVLEGIKLAGSTLGEGARAFLSDKEKMAAAVATLSAIALGVYSAKVGTGVAGRYVEARLGKPSLVRETSRSSVLADLRSPVATMKRIMASTDASEALSG-------VVLEPKLADRLSRVATSTSNTKRNKAPFRHLLLYGPPGTGKTMFAKGLARSSGLEYAILTGGDVAPLGRDAVTEIHKVFDWANTSKKGLLLFIDESDAFLRKRSTENISEDLRNALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVNDRIDEMVEFDLPGLEERRRMIDMYL 416          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: D7FW02_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW02_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 3.370e-136
Identity = 216/303 (71.29%), Postives = 255/303 (84.16%), Query Frame = 1
Query:   76 QQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFEL 975
            Q+TEL RVK ETEGRILAER+NHD+RLEQ R+ A ++R+T+L G+ L GET+G+G+ EFLGN  EMTA V+ +SA ALGIY+A+  TGV GR++EARLGRPSLVRETSR SA + L+HP++  +R F+      AL G A+  P+AIF PQME RL R+AES++NT+ NRAP+RHLLLHGPPGTGKTLFAKGLA+HSGLDYAI+TGGDVAPLGR AV   HK+FDWA+ SRRGVLLFVDEADAFLRRR+TE  SED RNALNAFLYRTGEQ+DRFMVVYASNQPEQFD+AINDRIDEM   E+
Sbjct:  192 QKTELERVKMETEGRILAERKNHDLRLEQKRQQAADTRETVLSGLKLTGETLGQGIAEFLGNRQEMTAVVLGLSAAALGIYSAKMGTGVMGRYVEARLGRPSLVRETSRRSAGEILKHPLQGARRLFKSVKPGDALEGDAS-LPKAIFVPQMEQRLRRVAESSSNTRANRAPFRHLLLHGPPGTGKTLFAKGLARHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEMGFVEV 493          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A484EE54_BRELC (AAA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE54_BRELC)

HSP 1 Score: 397 bits (1019), Expect = 1.000e-131
Identity = 210/338 (62.13%), Postives = 267/338 (78.99%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSY 1014
            +E+ AR++A RR+TL+YEA LRQ+TELARV AETEGRI  ER NHD+ LE+ R  A+E R+T+LE I LAG TVG G+  F+G+S+++TA VV+++A+A+GIY A+ ST +AG+++EAR+G+PSLVRETSR S  Q + +P+ +++R+ R   A  AL G        +  P+++ RL  +A ST NTK+NRAP+RHLLLHGPPGTGKTLFAK LA+HSGL+YAI+TGGDV+PLGR  V   HK+FDWA  SRRG+LLFVDEADAFL++R+    SED RNALNAFLYRTGE SD+FM+V+ASNQPEQFD AINDRIDEMV F LPG +ER RML  Y
Sbjct:  152 EEILARQEASRRKTLDYEAELRQKTELARVAAETEGRIKQERLNHDLHLEEDRVRAKEHRETVLEAIKLAGNTVGSGIMTFVGDSEKLTATVVSLTALAVGIYTAKVSTNIAGKYVEARMGKPSLVRETSRRSVAQVVANPIPSIKRSLRLQKATNALEG-------VVLEPKLDERLRSVALSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVSPLGREGVTEIHKLFDWASHSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMVEFRLPGFDERVRMLKQY 482          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A0P1A5E7_PLAHL (Atpase family aaa domain-containing protein 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5E7_PLAHL)

HSP 1 Score: 394 bits (1011), Expect = 1.930e-130
Identity = 211/341 (61.88%), Postives = 265/341 (77.71%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYMHQ 1023
            +E+  R++A RR+TL+YEA LRQ+TELA+V AETEGRI  ER NHD+ LE+ R  A+E R+T+LE I LAG TVG G+  F+ + +++TA V T++A+ALGIY A+ ST VAGR+IEAR+G+PSLVRETSR SA+Q + +P+ +++RA R   A  AL G        +  P++  RL  +A ST +TK NRAP+RHLLLHGPPGTGKTLFAK LA+HSGL+YAI+TGGDVAPLGR+ V   HK+FDWA  SRRG+LLFVDEADAFL++R+    SED RNALNAFLYRTGE SD+FM+V+ASNQPEQFD AINDRIDE+V F LPG +ER RML  Y  +
Sbjct:  158 EEILGRQEASRRKTLDYEAELRQKTELAKVAAETEGRIKQERLNHDLHLEEARVRAKEYRETVLESIKLAGNTVGSGIMTFVDDKEKLTATVATLTALALGIYTAKVSTNVAGRYIEARMGKPSLVRETSRRSAVQVVANPIPSIKRALRLQKATDALEG-------VVLEPKLNERLRSVALSTFHTKANRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGRAGVTEIHKLFDWASQSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEIVEFRLPGYDERVRMLKQYFDE 491          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: M4BV23_HYAAE (AAA domain-containing protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=M4BV23_HYAAE)

HSP 1 Score: 393 bits (1010), Expect = 2.570e-130
Identity = 210/338 (62.13%), Postives = 265/338 (78.40%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSY 1014
            +E+ AR++A RR+TL+YEA LRQ+TE+A+V AETEGRI  ER NHD+ LE+ R  A+E R+T++EGI LAG TVG G+  F+ + +++TA VV+++A+A GIY A+ ST VAG+++EAR+G+PSLVRETSR SA Q L +P+ +++RA R      AL G        +  P+++ RL  +A ST NTK+NRAP+RHLLLHGPPGTGKTLFAK LA+HSGL+YAI+TGGDVAPLGR  V   HK+FDWA  SRRG+LLFVDEADAFL++R+    SED RNALNAFLYRTGE SD+FMVV+ASNQPEQFD AINDRIDEMV F LPG +ER R+L  Y
Sbjct:  156 EEILARQEASRRKTLDYEAELRQRTEMAKVAAETEGRIKQERLNHDLHLEEARVRAKEYRETVMEGIKLAGNTVGSGVMSFVDDKEKLTATVVSLTALAAGIYTAKVSTRVAGKYVEARMGKPSLVRETSRRSAAQVLANPIPSIKRALRLQKPTDALEG-------VVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGREGVTEIHKLFDWASHSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVEFRLPGFDERVRILKQY 486          
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Match: A0A024UQX3_9STRA (AAA domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UQX3_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 1.850e-129
Identity = 208/339 (61.36%), Postives = 263/339 (77.58%), Query Frame = 1
Query:   10 QELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDIRLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSAVALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQRAFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRHLLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAV---HKVFDWARTSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVVYASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYM 1017
            +E+ AR++A RR+TL+YEA LR +TE+A+V AE EGRI  ER NHD+ LE+ R  A+E R+T++EGI LA  T+G G+  FLG+S+++TA VV++S +ALG+Y A+ STGV GR+IEARLG+PSLVRETSR S +Q L +P+ +++R  R      AL G        +  P+++ RL  +A ST NTK+NRAP+RHLLLHGPPGTGKTLFAK LA+HSGL+YAI+TGGDVAPLGR  V   HK+FDWA  S RG+L+FVDEADAFL++R+    SED RNALNAFLYRTGE SD+FM+V+ASNQPEQFD AINDRIDEMV F LPG +ER RML  Y+
Sbjct:  146 EEMLARQEASRRKTLDYEAELRTKTEMAKVAAEVEGRIKQERLNHDLHLEEARVRAKEYRETVMEGIKLATNTIGTGVMAFLGDSEKLTATVVSLSVLALGVYTAKVSTGVTGRYIEARLGKPSLVRETSRRSIVQVLANPIPSIKRVLRLGTPTDALAG-------VVLEPKLDERLRSVALSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGREGVTEIHKLFDWASHSNRGLLMFVDEADAFLQKRSNAVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMVEFMLPGLDERVRMLQQYV 477          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1298.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9L2_9STRA1.960e-15574.12AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A6H5LJ37_9PHAE4.240e-14768.44AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YR91_9STRA2.810e-14065.49AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D134_9STRA3.070e-14067.74AAA domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2D4S5_9STRA2.590e-13763.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D7FW02_ECTSI3.370e-13671.29AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A484EE54_BRELC1.000e-13162.13AAA domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A0P1A5E7_PLAHL1.930e-13061.88Atpase family aaa domain-containing protein 3 n=1 ... [more]
M4BV23_HYAAE2.570e-13062.13AAA domain-containing protein n=27 Tax=Peronospora... [more]
A0A024UQX3_9STRA1.850e-12961.36AAA domain-containing protein n=11 Tax=Aphanomyces... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1298contigP-wetherbeei_contig1298:11..7352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LFV8
Preferred nameATAD3A
PFAMsAAA,DUF3523
Model size1026
Max annot lvl2759|Eukaryota
KEGG koko:K17681
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0010941,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0036230,GO:0040008,GO:0042119,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0060548,GO:0065007,GO:0070820,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:0101002,GO:0101003
Exons6
Evalue1.97e-147
EggNOG OGsCOG1223@1|root,KOG0742@2759|Eukaryota
DescriptionATP binding
Cds size1026
COG categoryO
BRITEko00000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1298.1.1prot_P-wetherbeei_contig1298.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1298 11..7352 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185969.012023-CDS-P-wetherbeei_contig1298:10..761683185969.012023-CDS-P-wetherbeei_contig1298:10..76Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 11..76 -
1683185969.024443-CDS-P-wetherbeei_contig1298:495..7321683185969.024443-CDS-P-wetherbeei_contig1298:495..732Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 496..732 -
1683185969.0333247-CDS-P-wetherbeei_contig1298:1121..13161683185969.0333247-CDS-P-wetherbeei_contig1298:1121..1316Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 1122..1316 -
1683185969.0423002-CDS-P-wetherbeei_contig1298:1499..16771683185969.0423002-CDS-P-wetherbeei_contig1298:1499..1677Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 1500..1677 -
1683185969.052018-CDS-P-wetherbeei_contig1298:6564..67521683185969.052018-CDS-P-wetherbeei_contig1298:6564..6752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 6565..6752 -
1683185969.0621169-CDS-P-wetherbeei_contig1298:7190..73521683185969.0621169-CDS-P-wetherbeei_contig1298:7190..7352Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1298 7191..7352 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1298.1.1

>prot_P-wetherbeei_contig1298.1.1 ID=prot_P-wetherbeei_contig1298.1.1|Name=mRNA_P-wetherbeei_contig1298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp
DAKQELAAREDAIRRETLEYEASLRQQTELARVKAETEGRILAERENHDI
RLEQTRELARESRKTLLEGIALAGETVGKGLKEFLGNSDEMTAAVVTMSA
VALGIYAARTSTGVAGRFIEARLGRPSLVRETSRASALQQLRHPVKALQR
AFRRPDAVAALGGGAAGEPRAIFFPQMENRLLRIAESTANTKRNRAPYRH
LLLHGPPGTGKTLFAKGLAKHSGLDYAIMTGGDVAPLGRSAVHKVFDWAR
TSRRGVLLFVDEADAFLRRRATETASEDQRNALNAFLYRTGEQSDRFMVV
YASNQPEQFDEAINDRIDEMVLFELPGEEERYRMLTSYMHQ*
back to top

mRNA from alignment at P-wetherbeei_contig1298:11..7352-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1298.1.1 ID=mRNA_P-wetherbeei_contig1298.1.1|Name=mRNA_P-wetherbeei_contig1298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=7342bp|location=Sequence derived from alignment at P-wetherbeei_contig1298:11..7352- (Phaeothamnion wetherbeei SAG_119_79)
GACGCCAAACAGGAGCTGGCGGCGCGGGAGGACGCGATCCGACGGGAGAC GCTCGAGTACGAGGCGTCCCTGCGGCAGCAGACGGAGCTGGCGCGCGTCA AGGCCGAGACGGAGGGCCGCATCCTCGCCGAGAGGGAAAACCACGACATT CGTCTCGAGCAGGTGCGCGTATCTGTGCGTGTATCTCCGGCGTGATGGAT GGGTGGTGATGGCTTGGCAGTCAGGCAGGGCATCGAGCGGTGGCAGAGCG GGCTGTTGCAAACGGCGAGAGCATCTTTTTCTGGAGATGTCTTTGCTAAA TCCCATGTGCCTTATTGCGTCGTGCTTTGTTAAGAAGCGTTGAAGCGATT GCTGGAAGAGCACAGGTCTTGACTGCGGCACTTTTGTCTTCCAGTTTCTG TAAGTAAACGCGGGGCGGCGCACGCGTTCAAGATGGCTTCCGCCCAGCTT CAGTTCCTCTCTACTTTTCGTGTATATCCTCGCCCGCCGCCGCGCTCTCT TTTTAAAGCATCCTCTTCCTCGTCATTTTCCTCCTCCGCTCCGCCCGCTT CCCGTTCTTTCTTCTGATCATCCCTTCCTTCCGCAAAAATCGTTCGGCAG ACACGGGAGCTGGCGCGCGAATCGCGCAAGACGCTGCTGGAAGGCATCGC CCTGGCGGGGGAAACGGTCGGCAAGGGCCTCAAAGAGTTTCTCGGAAACA GCGACGAGATGACGGCCGCCGTGGTGACCATGTCGGCCGTCGCATTGGGC ATCTACGCCGCGCGGACGTCCACGGGGGTCGCCGGCAGGTGAGGAAAGTT TTTTGGTTTTGGATGCCGAGTTTGAGTTGTTTTGGCCCTTTTGGGGGGTT TTGGGGGTAAGGGGGGATTGAAAACCTGTTTCGAAATGCTTTTGGTATTT GTTGCTAGCATGGTAGGCGCTGGAGAGATGCGGGAGGTAGTTTCTTTGGT CTGGAACAAAGGATGTGGCGGGAGGATCTGAATACTGGAGGATGGCGGGA GAGCAGCAAACAAGGTGAATCGTGCTGGGATTTTTATCGGATTTGTCGCA TCGCGTCTCTGCCTCAGCGACGGGGCCGGCCGCCGTCCCGCCGCTCACTT CGCGTCGCTGAACTGTACGTCACATGGAAACCGCGGACATCTTCGTATTG GATGTGATTCGGGCCGTGCCAGCTTCGGCACAGCCTAGGGCTCCGAAGCG AAGTGGGATCATTGTTCTCCAGCTCACGCGCCGGGCGTTTCACGAGGTGA AGCTGTGTGTTGAGCGGCCTCGCCGCGGATGCAGAAAGGGACAGATCGGT GCGGATCCGGGCGATGATTCGACGTAACTGCGGACGGAACCGAGCTTCTC GCTCTGCAGCAGGAGAGGTTACGGAGGCAGTCGGCAATTGATGGATTCGG GGGCTGTTTCACAGCAAGACGTTTGAATCGTTGCGGGACTTGATTTGGAT TTCTCGCCGTCGCTCGCTGCTTCGGCGTCGGGACTGACCGCCGGCGTGTC GCTTCACCTCTTGTAGCCGCTTCGGGGCATGAGGAGGGATCCGCTACTCT TGATGGGTATCCAGCTCTATTTGATTGTGCCGCTGAGGCTGGGCATGGTT CTCCAGCCGTGCAATCCCGAAGCTGGACTCGGGAATCGATCCTCCAAGCC AGCTTCGGTGCGGCCCACGGCTCCGAACCAAAGTGGAAGCGCCACCTCGT CATCACACGCCAGGGGCTTTCACTTCACGAGGTGAAGCTGCATGTGCTGA TCGACCTTGCCGATAAGGCAGAAAACGACCAAGCTGAGTGGAGTTCCGCA ACGATTCAACGCAACCACCTATGGAAGCTGTTTTTTGGTTTGCAGGGGAA GCGATTTGGGACATAGTTTCCTCGGTCTGGAAGGAATACTGCGCGGCGGA GATTCCATTTGGGGAATGGAAACCTGGATATTGGATATGCTTTTGGCGTT CGCTTGATGCTTTTGTGGTGCGGGAGGTAGTTTCTTTTGTTTGGAACGAG TAATGTGGCGAAGGATATTGAGTATCAGGGGGAATGTTCAGAGAGTAGCA CGACGTTGAATCAGTGCTGGGATTCGCTATCGAAGTTGTCGCATCGCTTT CTGCCTCGGCGGCGGGGTCGAATGCCGGCGTGTCGCCTCACCTCTTCATA GCCGCTTTGGGGCGTGAGGAGAGATCCGCGGCTTCTCTTCGGCGTGCAAC TCGTCGTTCCTTCCGCTATAGCTCGGATTTAATCCACGTCAGCCAGCTTT GGCACGACCTGCGGGTTTCAAATCGAAGTGGGCTGGCGAGCTCCTACTTA TCATGCTTCAGGCGCTTGACGAGGTAAAGCGGCCTCGCGCCGATCTGCCT CGCCGCCGCAGCACAAAAGAGGCAAAGCCGAGCGAAGTCTTGGAATCATA CACCACAACTAACCAGACGGTAAGGCGGCTTCTCGCTTTACAGGGCGAAG GTGCGAGAGGCAGTTTCTTTCTTGGCAAAGGTAACTTGTGGAAGATTTTT TGAATAATTGTGGCATATTGCGAGCACCGACCGGGCGGTGCAGTGTGTTG TCTGCATGAAGGAGGGTTTGCCGCTCTTCTTGAAGTCGAAGACCACCGGG CCGTGCCATTGAAGCTGGGTTCCGGAGTCAAAGCTTCGGAACCAGGTTTT GCACGGCCTGGGGCTCCGAACTGAAGTGAAATGGCGTGCGTGCTCTTCGA AGGTGGTGTGCCAAATGGCGAGGCAAAAGTGGACACATTGCGGGAAGGGG CTTCTGCGTTACACAAGGAGGGGCATGCGAGGCAGGCAGTTTGTCGGCTG AGAGGTATTCATTCGTTGGTTTTAAAACTAAGAATACGTTTGAATCGTTG CGGGGCATTGCTCGAATCGATTGCATCGCTCTCTGCCTCCACGGTGGCGC TGATCGCGGGCGTGCCGCTCCACACCGCTCTACAAATTTAAAGTCTTTGG CGCTTGAAGCTCTGTTCGGAGTCGGTCCGCCCGAGCCAGCTCTGACTCGG CCTGGGGCTTCGACTTGAAGCCAGTTGGGCGGCTTCTCATCACACGCCAG GCGCTCTGTCAAGGCGTGAAATGCGCACAACGGTCTGCCTCGCTGTCCAC TGCGGAAATGGACAAATTGAGCGAAGTCCTGCCAGGATTTAACGCTTCTA GCTCTGGAAAGGGGCGGCTTGTTTTGCAGGAGGAAGGATCTGGGCGGCAG TTTATCTTGTCAACATTTGTGCCAAACTTTTGAGTGCTGGCTTCGTTGAC ATAACAAGGTGGTGCCATCGCGGGACTCTAGTGGGATCTGTCACAGCGCT CTTTTGCCTAAACGGCAGAGCCGATAACCGGCGTGCCATTTAAACCACAT GAATGCGCTGCAGGCGCGAGAGGACGCACGACTCCGTCTTAATCGTAAAG CGTTTAGGCTATGCCGTGATGGAGCTGGGCTCGGAGTCGGGTCAACCGAG CCAGCTTCGGCATGGCCTGTGCCTTCAAGCCAAATAAGATAGGCCAGCTT GCGGTCATGCACACAGCGGTCGACTGGGCGCGCCTGCAACCGGCAGCAGA ACCGTCCGTGCCGCTGCTGCTACACCTGTCAAAGCAGCTGATTGGCGTCA GAGAATTTTCGCCGCTTTTCTTGAATTTGCGTCACGAGGGACGTGCTACT CTGAAGCTGGGCGTGGAGTTTGATAACGCGAGCCAGCTTTGGCACGGCCT GGGACTGCGAGTTGGAAGTGGGCTGGCGATCTTCTTTTCTCGCGCGCCAG GCGCTTCATGAAGGGAGAAATGCTTGCAACAGTCGGGCTTGTCATTCATG GCAGAAAAAAGCGAAGCTGAAATGATGCACGGAGGTATACCTTTTTTGCC CTTTTTTGCTTTGTAGGGTGTAGAAGTCAATGGGAGAAGGAGCGTCTTTC TCCTTTTTCCGCGTACGTTCTGAAGCAAGTATTGCGGGATTTGTCGAATC ACCACTCTGGTGATCGGGCTGACAGCCGGCGCACGTGCCCCACATGTCGA AGGCTTCCAAGGCTTGAGGGAGAGTTTCCCACCTGTCTTCCCGTAGAAGC AGTCAGGCCGTGCCGCTGAAGCTGGCTTTGGAGTCGGTCCACCGGAGCCA GGTTCGGCATGGCCCAGGGCTTTGAATCGAGTTATTGCCGAATTTCCTCC TCACGCGCCAAGCGCTTCACTAGGCTGAGCAGCGACCTGTCGGTCTGCAC CGCCGCCCGCGGCGGAAGGGAGAAAGTCGGCCTACGTCCTGCAATGATTT TACGCGACGAGCTACTGGATGGGGCTTTCATGCTGTGTAGGATAGGCATG TGGACACAGTTTCTCGTTTGGCACTGAAATACTATGGCTGCTTTTTGAAG TGACTGAAGGCAATATTGACACATAACAAAGCGGTGTCGGTGCAGGGCTT TTCTCGGATTTTCGTAACTGTCTGCTTGGCGGTGGGGCCAACCTCCGACG TGCCGGATCAAGTCCAAACCACACGGAGGGCGTGATGGGTGGTTCGCTGT CCTTCGTTGATGGGGTATTGTGCTGTGCTGCCCTGACACTGGGCTCCGGA GTTCGAACACCGAACCAGCATCGGCACAGCCAGAGGCTCCGAATCGAAGT GGCCCCGCGAGCTCCTCCTCACACGCCAGGTGTGTCACGAAGTGAAGGCT GCATGTGCCGAACAGCCTGCCCTCACGGCCGGGCAGCCGGGCGAAATCCT GCGATGATTAAAACGACTAACCACAGGAGGCACTCCTTGCGTTGGGGGAG AAGTGATGTCTTAAGCAGTTTTTGCCTTTGCAGGAGGTGGGCAGAGGTGG TTTAGTCGGTTCGCAAAGTATTGGGAGAAGTTCTCACCAACGAGACGTTA AATCGTTTGCGGGACTTGGCTCCGCCTCAACGGTGAGGCCGACCGCCGTC GTTTCGTGCCACCCTTGAAAGCGCCGGTGCCCGTGACGGGAAAGTCACGG CTCATCTTGTGACAGTATTCGGAGTGTGCCGCTGAAGTTGAGGTCCGGAG TTCGGCCACTGGAGCCAGCATCAACACTACCCGGGGCTTTCAACCGAAAT GGGGTCGCGTGCGCTCCTCCTGACGCGCCAGGCAATTTACGAGTTTGGAA ACTGCGTATCCGCTGCAGTGGTAGACAATGACAATCCTCGCGACGTACTT ACGGACGTTTCTTTGCGGTTGTCGCGCTTGCCTGTGTCGGGGCAGGCACT TCTGGCGCTGTGAACGGTGGCGAAATACGTCTGTTCTTATTCCATAAGTC ATCCGTAATTCTTGCTAGATGGAAGTGCGTTTGACCTGCCGTTTGGTTGT AAGGCCAGTAGCTTTCTCCATGCGGGTGCTAACGCATATTGGAACGCCAT GCTTCACTAAGTAGCTGTTCGCAACGACATGCGGCAGGTGCCTCTTGGGT TTTCGGGGGATCGTGATGCCTTTTCTTAGGTTTCACTTTCTTTCGGTTTG TTGCTTAATTTTGTAGGACGGCTGATTCCTCGTTTCAACCGGCGGTAGCT CTCGTTCGCCGTGCTGATCCTTTGCAGCATGCCTGGCCGGCCTCGTCGCC GAGATCTTTGCTGCGCCAATTGTCATTTCCTGTACTTTTTTGTCTTTTCG TGGATCTACCGGCTGACATGTTGGCACGGTACAAAATTTCCGCTTTTTGA CACGTCACCTCTGCCGCCGCGGCAGGTTCATCGAAGCGCGGCTGGGGCGG CCGTCGCTGGTGCGTGAGACATCCCGTGCATCGGCGCTGCAGCAGCTGCG GCATCCCGTCAAGGCTTTGCAGCGGGCCTTCCGGCGGCCTGATGCCGTGG CGGCGCTCGGCGGCGGCGCGGCCGGCGAGCCCAGGGCCATCTTCTTCCCC CAGGTGAGGGGTTAGGTCGTGCTTTGTTCTTCAATAGTTTGGCATTTTGG ATAGGGGCCTCGTTGGCATCATTTCGTGCCCATGGAGCATGCAGACAGAT GCTGCATTCTGATGTTAACCGCTGCGTTTCGAAGCCGGAAGACTGACCGC GATTGTTAATTGTTTCGCTTTTCCTCGCTATTGCAGATGGAAAACCGACT GCTGCGCATCGCGGAGAGCACGGCCAACACGAAGCGGAACCGCGCGCCAT ACCGGCATCTGCTGCTGCACGGTCCGCCCGGCACGGGCAAGACGCTTTTC GCCAAGGGGCTGGCCAAGCACTCAGGGCTCGACTATGCAATCATGACAGG CGGCGACGTTGCGCCACTCGGCCGCTCGGCCGTCACCGAGGCGAGCGAAT GAGAATCGTAACGTGTACTAGCACACTACGTTTTTGTTCGTGTTTATCTT TTGGAAGCACATAGTCGCCGAGGGCTCATTTTGTCGTTTTGGCTAATCGC GGTGTCATGCTTGAATGCGCAGCCGTGGGAAGTAGTTGGCTTCGCGCATG CACTGGAGTGAGACATGGCTCCATTGCTCACTGTATTTTCTATCATGTAG ACCTGCTGTGCGTCAGCCTCCAGAGCAAGAGCAATCGGTAATTCTTTAGA GACCCGATCGAACGGACTCCGGTTAAGTTGTCCTCCACTCCCCAAGTCAG TTTCACCTAACCCTGCCCGAATCCTTCAAAACCACACACAAAACCCGCTG CCTCCGAAAACAATTGGCAGGTTCACAAGGTGTTTGACTGGGCCAGGACG TCCCGCCGCGGCGTGCTCCTCTTCGTGGACGAGGCCGACGCTTTCCTTCG GCGGCGCGCCACCGAAACGGCCTCGGAGGACCAGCGGAACGCGCTCAACG CCTTTCTGTACCGGACGGGCGAGCAGTCAGACCGCTTCATGGTAGTGTAC GCGAGCAACCAGCCCGAGCAGTTCGACGAGGCCATCAACGACCGCATCGA CGAGATGGTGCGTGGATGCTTCTCTGTTTTCTGCTGTCATATCTGTTTCT GCTTTTTCGCTTCTGTCTCTACTTTGCCGTCTCGTCTCCCTAGGCGGATC TGTCGGCTCTGTTAGGATTTCCGTGGTTGCGCTTTTTCGTCGTTTCTCCC CTTCTATTCGTCTAAAACGCTTGTGTTGCGTGTGCGGGCGGCCGCTGAAC CGGTGCTATTTCTCCGTGTCAAATCTTGCTCAGCTTCTTCTGTTTCTCAA TCTCTTCTCCTTGCGGCCCACACCGGAACGCTCCTGTCGCTCGTCTCTTT TGTGCCTCACCGGACCGAGATACGTTTGTTGTCGTCGGCGTTGTTTGCTC TGTACTGACGGCCGCCACTGCGCATTTGCTGCTGCCGACCCCAACCCCCC GCCCGAATCCGCCAACCTGCCTGCAGGTGCTCTTCGAGCTGCCGGGCGAG GAGGAGCGCTACCGCATGCTTACTTCCTACATGCACCAGTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1298:11..7352-

>mRNA_P-wetherbeei_contig1298.1.1 ID=mRNA_P-wetherbeei_contig1298.1.1|Name=mRNA_P-wetherbeei_contig1298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig1298:11..7352- (Phaeothamnion wetherbeei SAG_119_79)
GACGCCAAACAGGAGCTGGCGGCGCGGGAGGACGCGATCCGACGGGAGAC
GCTCGAGTACGAGGCGTCCCTGCGGCAGCAGACGGAGCTGGCGCGCGTCA
AGGCCGAGACGGAGGGCCGCATCCTCGCCGAGAGGGAAAACCACGACATT
CGTCTCGAGCAGACACGGGAGCTGGCGCGCGAATCGCGCAAGACGCTGCT
GGAAGGCATCGCCCTGGCGGGGGAAACGGTCGGCAAGGGCCTCAAAGAGT
TTCTCGGAAACAGCGACGAGATGACGGCCGCCGTGGTGACCATGTCGGCC
GTCGCATTGGGCATCTACGCCGCGCGGACGTCCACGGGGGTCGCCGGCAG
GTTCATCGAAGCGCGGCTGGGGCGGCCGTCGCTGGTGCGTGAGACATCCC
GTGCATCGGCGCTGCAGCAGCTGCGGCATCCCGTCAAGGCTTTGCAGCGG
GCCTTCCGGCGGCCTGATGCCGTGGCGGCGCTCGGCGGCGGCGCGGCCGG
CGAGCCCAGGGCCATCTTCTTCCCCCAGATGGAAAACCGACTGCTGCGCA
TCGCGGAGAGCACGGCCAACACGAAGCGGAACCGCGCGCCATACCGGCAT
CTGCTGCTGCACGGTCCGCCCGGCACGGGCAAGACGCTTTTCGCCAAGGG
GCTGGCCAAGCACTCAGGGCTCGACTATGCAATCATGACAGGCGGCGACG
TTGCGCCACTCGGCCGCTCGGCCGTTCACAAGGTGTTTGACTGGGCCAGG
ACGTCCCGCCGCGGCGTGCTCCTCTTCGTGGACGAGGCCGACGCTTTCCT
TCGGCGGCGCGCCACCGAAACGGCCTCGGAGGACCAGCGGAACGCGCTCA
ACGCCTTTCTGTACCGGACGGGCGAGCAGTCAGACCGCTTCATGGTAGTG
TACGCGAGCAACCAGCCCGAGCAGTTCGACGAGGCCATCAACGACCGCAT
CGACGAGATGGTGCTCTTCGAGCTGCCGGGCGAGGAGGAGCGCTACCGCA
TGCTTACTTCCTACATGCACCAGTAG
back to top