mRNA_P-wetherbeei_contig12956.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12956.1.1
Unique NamemRNA_P-wetherbeei_contig12956.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A836CKL8_9STRA (DHC_N1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.450e-51
Identity = 93/153 (60.78%), Postives = 110/153 (71.90%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            FYRYG+MLKKVANFYNNM+ QII  Q+PMLLDSLLAFE VVT  +LT+G              ++W+N VEC  YV RLQ A D LSLENRRLRKVH  L  +VC LM+VDLLRQRDLW++KW A +E V  L + YP +RM +WL +WD QV
Sbjct:  627 FYRYGIMLKKVANFYNNMETQIIDAQKPMLLDSLLAFEEVVTQPTLTKGRGTTSG-------QITWANEVECAQYVARLQGAADTLSLENRRLRKVHDELCKRVCQLMSVDLLRQRDLWRSKWQAAEELVTGLRSKYPPERMAKWLRHWDEQV 772
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 3.000e-47
Identity = 87/147 (59.18%), Postives = 103/147 (70.07%), Query Frame = 1 
Query:   19 MLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            MLKKVANFYNNM  Q+I  Q+PMLLDSLLAFE VV   +L R               V+WSNPVECENYVERLQ+A D LS+ENRRLRKVHASL   V G+M++DLLRQRD WK  WA I+E V  + A Y    +++W+ YWDHQ+
Sbjct:    1 MLKKVANFYNNMASQVILVQKPMLLDSLLAFEEVVMQPTLAR-----KGKDGSTRTSVTWSNPVECENYVERLQRAADTLSMENRRLRKVHASLSSLVSGIMSIDLLRQRDRWKTHWAQIREVVSGIQAKYSASSVEQWITYWDHQM 142
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A7S1CH85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH85_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.470e-42
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVANFYN M  QII  Q+PML D+LLAFE VV +     G              ++WSNP  C+ YV+ LQ+  + L+ ENR+LRK+H  LG  V  LMN+DLLRQR+ WKA+W  +++ + +L   YP +RM +W ++WDHQ+
Sbjct:  151 YYRYGVQLKKVANFYNTMGSQIIAVQKPMLYDTLLAFETVVQNP----GRAARGGRAAGGGHSITWSNPEGCQEYVDALQKGAETLAAENRKLRKMHVRLGEDVVALMNIDLLRQREAWKARWTGMRDVMTSLERVYPAERMAKWKLHWDHQL 299
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A5D6XL42_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL42_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.290e-38
Identity = 86/156 (55.13%), Postives = 102/156 (65.38%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXM-VSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVD--RMKRWLIYWDHQV 459
            +YRYGVMLKKVANFYNNM+ QII EQ+PMLLDSLLAFE  V    L++    XXXXXX      V+W N  EC  YV +LQ+A D LS ENRR ++ H  LG +   LM+VDLLR    WK +W  IK  V  LA T   D  R K+W +YWDHQ+
Sbjct:  641 YYRYGVMLKKVANFYNNMESQIIDEQKPMLLDSLLAFEDAVKRPGLSQPPKSXXXXXXASRTKDVTWQNLDECNEYVRQLQEAADKLSAENRRFKRAHEKLGEEFLALMDVDLLRHPTKWKERWDEIKRSV--LAVTKKQDPARTKKWFLYWDHQL 794
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.090e-37
Identity = 75/153 (49.02%), Postives = 97/153 (63.40%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVANFYNNM+ Q+I EQ+PMLLD+L+AFE +V       G              V+W+N  ECE YV+ LQQA D LS+ENR+LR+ H  +G  +  LM+VDLLR  + WK K   IK  ++     Y  +  KRWL+YWDHQ+
Sbjct: 1874 YYRYGVTLKKVANFYNNMESQVIEEQKPMLLDALIAFEEIVKKP----GKSTTSKTSKPKAIDVTWNNLEECEEYVKHLQQAADALSIENRKLRRAHEKIGEDLVLLMDVDLLRYPEKWKDKNDTIKAFINVTIKKYDPNLTKRWLLYWDHQL 2022
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A485LI71_9STRA (Aste57867_21689 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI71_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.760e-37
Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVAN+YNNM+ QII  Q+PMLLD+L+AFE +V     +                V+W+N  ECE YV +LQQA D LS+ENR+LR+ H  +G ++  LM+VDLLR  + WK K+ AIK  V      Y     K+WL++WDHQ+
Sbjct:  603 YYRYGVTLKKVANYYNNMESQIIDNQKPMLLDALVAFEEIVKRPGSSVKTTTNTKTSKPKQVDVTWNNLDECEEYVRQLQQAADALSVENRKLRRAHDKIGDELVVLMDVDLLRYPEKWKDKFEAIKAFVTVTVKKYDPSLSKKWLLHWDHQL 755
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A8J2SHJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHJ0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.010e-37
Identity = 70/153 (45.75%), Postives = 99/153 (64.71%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YR+GV+LKKVA+F+N+MD QI+  QRPMLL++L+AFE +V   +   G             ++ W  P E E YVERLQQA   L+ ENR+LR +H  L   V  LM++D+L+ R  WK  W  I  +++ L+  YP DRM++W+I+WDHQV
Sbjct:  615 YYRFGVVLKKVASFFNSMDTQILKTQRPMLLNALMAFEEIVEKRNTHGG-------------VIEWRTPTEYERYVERLQQAATKLAHENRQLRHIHHELSTSVVLLMDIDMLKHRSKWKQHWLEIVGRINVLSDRYPQDRMRKWVIHWDHQV 754
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: K3WM96_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM96_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 3.220e-36
Identity = 73/153 (47.71%), Postives = 91/153 (59.48%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVANFYNNM+ QII EQ+PMLLDSLLAFE  V    L +               V+W N  EC  YV++LQ A D LS ENRR ++ H  L  +   LM++DLLR    WK +W  IK+ V  +       R K+W +YWDHQ+
Sbjct:  614 YYRYGVTLKKVANFYNNMESQIIEEQKPMLLDSLLAFEEAVKRPGLAQQKSSLSSKKD-----VTWQNLEECNEYVKQLQDAADKLSSENRRFKRAHEKLSEEFLALMDIDLLRYPTKWKERWDDIKKTVLTVTKKQDPARTKKWFLYWDHQL 761
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A6A5A240_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A240_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.400e-36
Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXM-VSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVANFYNNM+ QII EQ+PMLLD+L+AFE +V    +                + V+W+N  ECE YV +LQQA D LS+ENR+LR+ H  +  ++  LM+VDLLR  + WK K+  IK  V      Y     K+WL++WD+Q+
Sbjct:  606 YYRYGVTLKKVANFYNNMESQIIDEQKPMLLDALVAFEDIVRRPGVKSAAASAKTTTSKQKPVDVTWNNLEECEEYVRQLQQAADALSVENRKLRRAHDKVSEELVVLMDVDLLRYPEKWKDKFDTIKAFVTTTVKKYDPSLTKKWLLFWDYQL 759
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BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Match: A0A3L6V0K6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V0K6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.450e-36
Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = 1 
Query:    1 FYRYGVMLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGXXXXXXXXXXXXXM-VSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCGLMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV 459
            +YRYGV LKKVANFYNNM+ QII EQ+PMLLD+L+AFE +V    +                + V+W+N  ECE YV +LQQA D LS+ENR+LR+ H  +  ++  LM+VDLLR  + WK K+  IK  V      Y     K+WL++WD+Q+
Sbjct:  349 YYRYGVTLKKVANFYNNMESQIIDEQKPMLLDALVAFEDIVRRPGVKSAAASAKTTTSKQKPVDVTWNNLEECEEYVRQLQQAADALSVENRKLRRAHDKVSEELVVLMDVDLLRYPEKWKDKFDTIKAFVTTTVKKYDPSLTKKWLLFWDYQL 502
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12956.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKL8_9STRA3.450e-5160.78DHC_N1 domain-containing protein n=1 Tax=Tribonema... [more]
D8LN02_ECTSI3.000e-4759.18Dynein heavy chain dynein heavy chain n=1 Tax=Ecto... [more]
A0A7S1CH85_9STRA3.470e-4248.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5D6XL42_9STRA4.290e-3855.13Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0A6P2_9STRA1.090e-3749.02Dynein heavy chain n=1 Tax=Thraustotheca clavata T... [more]
A0A485LI71_9STRA3.760e-3747.71Aste57867_21689 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J2SHJ0_9STRA7.010e-3745.75Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3WM96_GLOUD3.220e-3647.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A5A240_9STRA4.400e-3646.75Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3L6V0K6_9STRA4.450e-3646.75Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12956contigP-wetherbeei_contig12956:964..1869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LN02
Preferred nameDYNC2H1
PFAMsAAA_5,AAA_6,AAA_7,AAA_8,AAA_9,DHC_N1,DHC_N2,Dynein_heavy,MT
Model size459
Max annot lvl2759|Eukaryota
KEGG koko:K05636,ko:K10414
KEGG Pathwayko04145,ko04151,ko04510,ko04512,ko04962,ko05132,ko05145,ko05146,ko05165,ko05200,ko05222,map04145,map04151,map04510,map04512,map04962,map05132,map05145,map05146,map05165,map05200,map05222
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001568,GO:0001578,GO:0001944,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005858,GO:0005868,GO:0005874,GO:0005875,GO:0005929,GO:0005930,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007030,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007600,GO:0007605,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007626,GO:0007628,GO:0007635,GO:0007638,GO:0008049,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008569,GO:0008589,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009799,GO:0009855,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010256,GO:0010467,GO:0010646,GO:0010647,GO:0010648,GO:0010970,GO:0010996,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016485,GO:0016545,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017015,GO:0017111,GO:0019098,GO:0019538,GO:0019953,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030286,GO:0030326,GO:0030512,GO:0030534,GO:0030705,GO:0030900,GO:0030990,GO:0031223,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035721,GO:0035735,GO:0036156,GO:0036159,GO:0040024,GO:0042073,GO:0042221,GO:0042623,GO:0042995,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044458,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045177,GO:0045184,GO:0045433,GO:0045503,GO:0045505,GO:0045880,GO:0046907,GO:0048065,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048609,GO:0048699,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051959,GO:0055115,GO:0060173,GO:0060179,GO:0060271,GO:0060322,GO:0060976,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090659,GO:0097014,GO:0097542,GO:0097730,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902494,GO:1903844,GO:1903845,GO:1905515,GO:1990939,GO:2000026
Exons3
Evalue2.09e-48
EggNOG OGsCOG5245@1|root,KOG3595@2759|Eukaryota
Descriptiondynein light chain binding
Cds size441
COG categoryZ
BRITEko00000,ko00001,ko03036,ko04516,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.9093926-CDS-P-wetherbeei_contig12956:963..11371683185967.9093926-CDS-P-wetherbeei_contig12956:963..1137Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12956 964..1137 -
1683185967.9215117-CDS-P-wetherbeei_contig12956:1374..15961683185967.9215117-CDS-P-wetherbeei_contig12956:1374..1596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12956 1375..1596 -
1683185967.930893-CDS-P-wetherbeei_contig12956:1806..18511683185967.930893-CDS-P-wetherbeei_contig12956:1806..1851Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12956 1807..1851 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.939672-UTR-P-wetherbeei_contig12956:1851..18691683185967.939672-UTR-P-wetherbeei_contig12956:1851..1869Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12956 1852..1869 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12956.1.1prot_P-wetherbeei_contig12956.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12956 964..1851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12956.1.1

>prot_P-wetherbeei_contig12956.1.1 ID=prot_P-wetherbeei_contig12956.1.1|Name=mRNA_P-wetherbeei_contig12956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MLKKVANFYNNMDYQIIPEQRPMLLDSLLAFEAVVTHSSLTRGGGGGGGG
GGNGGGMVSWSNPVECENYVERLQQAVDVLSLENRRLRKVHASLGVQVCG
LMNVDLLRQRDLWKAKWAAIKEQVDNLAATYPVDRMKRWLIYWDHQV
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mRNA from alignment at P-wetherbeei_contig12956:964..1869-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12956.1.1 ID=mRNA_P-wetherbeei_contig12956.1.1|Name=mRNA_P-wetherbeei_contig12956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig12956:964..1869- (Phaeothamnion wetherbeei SAG_119_79)
TTCTACCGCTACGGAGTCATGCTGAAGAAGGTCGCCAACTTTTACAATAA
CATGGACTACCAGGTGTGACGATAAATTGTCATCTTGTGATTTCCGATAC
TCTAGCCGCTTCGCATTTGTTGTCGGCGTTGCATGCGCCATTGTTTTGTG
GGAGCAATAGTGTAACTGGCTTTTCTGTTTTCGTGGCTGTAAGCAAGCAT
TTACTCTTCCTGATTAGCCCAATGCCTTTCTGACGTTCCCGTACCGAATG
TTGTCTTTTTGCCTTTCTTACAGATCATTCCGGAGCAGCGGCCAATGCTT
CTCGACAGTCTCCTGGCCTTCGAGGCAGTGGTCACCCACTCCTCCCTGAC
CCGGGGTGGCGGCGGCGGCGGCGGCGGCGGCGGAAACGGCGGCGGGATGG
TGTCATGGAGCAACCCCGTCGAATGCGAGAACTATGTGGAGCGGCTGCAG
CAGGCCGTTGACGTTCTCAGCCTCGAGAATCGTCGCCTGCGCAAGGTGGG
ATTGAGGATGGGAACGTGTTCTCGGTGCAGCGGATGGCTGCCGCCGTATT
TCTGAACTTTTGAGTGTAATCTGAAGGGCAGCGATGGCATGAATCTCTCT
TTAAAGTATGATATTTTATATAACTTATAGTTTGATATCCGGAGTGCTAC
TATGTACTGCTTGAACGGTTCGGGAATACATCAACCAACATCTTTCCCTC
TTCCTCCTTCCCTCTTCCTGCCGCTGCCTCAGGTGCACGCATCTCTTGGG
GTGCAGGTATGCGGGCTGATGAACGTGGACCTTCTACGGCAGCGGGACCT
GTGGAAGGCCAAGTGGGCGGCCATCAAGGAGCAGGTCGACAATTTGGCCG
CCACCTACCCCGTCGACCGCATGAAGCGCTGGCTTATTTACTGGGACCAC
CAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12956:964..1869-

>mRNA_P-wetherbeei_contig12956.1.1 ID=mRNA_P-wetherbeei_contig12956.1.1|Name=mRNA_P-wetherbeei_contig12956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig12956:964..1869- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAAGAAGGTCGCCAACTTTTACAATAACATGGACTACCAGATCAT
TCCGGAGCAGCGGCCAATGCTTCTCGACAGTCTCCTGGCCTTCGAGGCAG
TGGTCACCCACTCCTCCCTGACCCGGGGTGGCGGCGGCGGCGGCGGCGGC
GGCGGAAACGGCGGCGGGATGGTGTCATGGAGCAACCCCGTCGAATGCGA
GAACTATGTGGAGCGGCTGCAGCAGGCCGTTGACGTTCTCAGCCTCGAGA
ATCGTCGCCTGCGCAAGGTGCACGCATCTCTTGGGGTGCAGGTATGCGGG
CTGATGAACGTGGACCTTCTACGGCAGCGGGACCTGTGGAAGGCCAAGTG
GGCGGCCATCAAGGAGCAGGTCGACAATTTGGCCGCCACCTACCCCGTCG
ACCGCATGAAGCGCTGGCTTATTTACTGGGACCACCAGGTG
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