mRNA_P-wetherbeei_contig12952.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12952.2.1
Unique NamemRNA_P-wetherbeei_contig12952.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A537N4R5_9PROT (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N4R5_9PROT)

HSP 1 Score: 199 bits (507), Expect = 3.540e-62
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVAVPE 363
            MAVVETER+GQVL+VRMNRP+RLNAL+ EMR  LA  WTEFRHDKQ+EVAIFTGTGRGFCAGEDMKE+L  G PGG R +I +PFM G LEKPVIAA+NGFAMGGGFMLVERTDLRVAV E
Sbjct:    1 MAVVETERHGQVLVVRMNRPDRLNALSAEMRSELARIWTEFRHDKQMEVAIFTGTGRGFCAGEDMKESLERGKPGGERPRIEDPFMSGALEKPVIAAVNGFAMGGGFMLVERTDLRVAVRE 121
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A521M2W6_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M2W6_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 1.460e-60
Identity = 98/121 (80.99%), Postives = 106/121 (87.60%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVAVPE 363
            MAVVETER+GQVL+VRMNRPERLNAL+ EMR  LA+ WT+FRH K+LEVAIFTGTGRGFCAGEDMKE+L  GV GG R  I +PFM G LEKPVIAAINGFAMGGGFMLVERTDLRVAV E
Sbjct:    1 MAVVETERHGQVLVVRMNRPERLNALSHEMRTELAQAWTDFRHSKELEVAIFTGTGRGFCAGEDMKESLQKGVAGGQRPAIEDPFMSGKLEKPVIAAINGFAMGGGFMLVERTDLRVAVAE 121
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A5C5S7U2_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5S7U2_9HYPH)

HSP 1 Score: 194 bits (494), Expect = 2.840e-60
Identity = 95/118 (80.51%), Postives = 103/118 (87.29%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            M VVETER+GQ+L+VRMNRP+RLNALN EMR  LAE WT+FRHD QLEVAIFTG GRGFCAGEDMKE+L  G PGG R  I +PFM GTLEKPVIAA+NGFAMGGGFMLVERTDLRVA
Sbjct:    1 MTVVETERHGQILVVRMNRPDRLNALNHEMRGRLAEVWTDFRHDDQLEVAIFTGAGRGFCAGEDMKESLKDGAPGGRRPDIEDPFMSGTLEKPVIAAVNGFAMGGGFMLVERTDLRVA 118
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A1H8XJE7_9PROT (Enoyl-CoA hydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8XJE7_9PROT)

HSP 1 Score: 194 bits (492), Expect = 5.870e-60
Identity = 96/121 (79.34%), Postives = 106/121 (87.60%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVAVPE 363
            MAVVETER+GQVL+VRMNRP+RLNALNTEMR  LA+ WT+FRH K+LEVAIFTG GRGFCAGEDMKE+L  GV GG R K  +PFM G LEKPVIAA+NGFAMGGGFMLVERTDLR+AV E
Sbjct:    1 MAVVETERHGQVLVVRMNRPDRLNALNTEMRTELAKIWTDFRHSKELEVAIFTGAGRGFCAGEDMKESLQKGVAGGERPKQEDPFMTGALEKPVIAAVNGFAMGGGFMLVERTDLRLAVRE 121
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: UPI0010C14A70 (enoyl-CoA hydratase-related protein n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI0010C14A70)

HSP 1 Score: 192 bits (489), Expect = 1.580e-59
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            M+VVETER+GQVL+VRMNRPERLNALNTEMR  LA+ WT FRHD+ L+VAI TGTGR FCAGEDMKE+L    PGGT L I+NPF DGTLEKPVIAA+NGFAMGGGFMLVERTDLRVA
Sbjct:    1 MSVVETERHGQVLVVRMNRPERLNALNTEMRVELAKAWTAFRHDEGLDVAILTGTGRAFCAGEDMKESLANRTPGGTPLDIANPFNDGTLEKPVIAAVNGFAMGGGFMLVERTDLRVA 118
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A2E9Y4L3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y4L3_9PROT)

HSP 1 Score: 192 bits (489), Expect = 1.620e-59
Identity = 96/121 (79.34%), Postives = 104/121 (85.95%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVAVPE 363
            MAVVETER+GQ+ +VRMNRPERLNALNTEMR  LAE WTEFR  K+LEVAIFTGTGRGFCAGEDMKETL  G PGG  L++S+P+ DGTLEKPVI AINGFAMGGGFML E  DLRVAV E
Sbjct:    1 MAVVETERHGQIFVVRMNRPERLNALNTEMRTMLAEIWTEFRESKELEVAIFTGTGRGFCAGEDMKETLEHGRPGGKVLQLSDPYRDGTLEKPVIGAINGFAMGGGFMLAEGADLRVAVHE 121
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: A0A537QIU3_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QIU3_9PROT)

HSP 1 Score: 191 bits (486), Expect = 4.900e-59
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            MAVVETER+GQ+L+VRMNRPERLNALN EMR  LAETWTEFR   +LEVAIFTG GR FCAGEDMKE+L  G PGGTR +I +PFM G LEKPVIAA+NG+AMGGGFMLVERTDLRVA
Sbjct:    1 MAVVETERHGQILVVRMNRPERLNALNLEMRTRLAETWTEFRRSNELEVAIFTGAGRAFCAGEDMKESLQRGQPGGTRPEIEDPFMTGALEKPVIAAVNGYAMGGGFMLVERTDLRVA 118
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: UPI001BA4E5E9 (enoyl-CoA hydratase-related protein n=1 Tax=Roseomonas arctica TaxID=1509237 RepID=UPI001BA4E5E9)

HSP 1 Score: 188 bits (478), Expect = 7.520e-58
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            MAVVETER+GQVL+VRMNRPERLNALN E+R ALA+TWT+FR D  LEVAI TGTGR FCAGEDMKETL    PGG  L I +PF  GTLEKPVIAA+NGFAMGGGFMLVERTDLRVA
Sbjct:    1 MAVVETERHGQVLVVRMNRPERLNALNHELRVALAQTWTDFRRDDGLEVAILTGTGRAFCAGEDMKETLADATPGGRALDIEDPFRSGTLEKPVIAAVNGFAMGGGFMLVERTDLRVA 118
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: UPI001BA7C6C5 (enoyl-CoA hydratase/isomerase family protein n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BA7C6C5)

HSP 1 Score: 188 bits (477), Expect = 1.030e-57
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            MAVVETER+GQVL+VRMNRPERLNALN E+R  LA+TWTEFRHD  LEVAIFTGTGR FCAGEDMKE+L    PGG R  I +PF  G LEKPVIAA+NGFAMGGGFMLVERTDLRVA
Sbjct:    1 MAVVETERHGQVLVVRMNRPERLNALNHELRTELAKTWTEFRHDDALEVAIFTGTGRAFCAGEDMKESLAENNPGGRRPTIEDPFNSGALEKPVIAAVNGFAMGGGFMLVERTDLRVA 118
[Close]
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Match: UPI001C20BFB2 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI001C20BFB2)

HSP 1 Score: 190 bits (483), Expect = 3.000e-57
Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:    1 MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVAIFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAINGFAMGGGFMLVERTDLRVA 354
            MAVVETER+GQ+L+VRMNRPERLNALN E+R  LAETWT FRHD +LEVAIFTG GR FCAGEDMKE+L  G PGG R   ++PFM G LEKPVIAA+NGFAMGGGFMLVERTDLRVA
Sbjct:  111 MAVVETERHGQILVVRMNRPERLNALNHELRSELAETWTAFRHDNELEVAIFTGAGRAFCAGEDMKESLQDGAPGGRRPAAADPFMTGDLEKPVIAAVNGFAMGGGFMLVERTDLRVA 228
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12952.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537N4R5_9PROT3.540e-6280.99Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
A0A521M2W6_9HYPH1.460e-6080.99Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A5C5S7U2_9HYPH2.840e-6080.51Uncharacterized protein n=1 Tax=Reyranella sp. CPC... [more]
A0A1H8XJE7_9PROT5.870e-6079.34Enoyl-CoA hydratase n=2 Tax=Alphaproteobacteria Ta... [more]
UPI0010C14A701.580e-5980.51enoyl-CoA hydratase-related protein n=1 Tax=Roseom... [more]
A0A2E9Y4L3_9PROT1.620e-5979.34Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A537QIU3_9PROT4.900e-5979.66Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
UPI001BA4E5E97.520e-5879.66enoyl-CoA hydratase-related protein n=1 Tax=Roseom... [more]
UPI001BA7C6C51.030e-5779.66enoyl-CoA hydratase/isomerase family protein n=2 T... [more]
UPI001C20BFB23.000e-5778.81enoyl-CoA hydratase/isomerase family protein n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12952contigP-wetherbeei_contig12952:1549..1911 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000002_gene2783
PFAMsECH_1
Model size363
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.25e-58
EggNOG OGsCOG1024@1|root,COG1024@2|Bacteria,1QGFN@1224|Proteobacteria
DescriptionEnoyl-CoA hydratase isomerase
Cds size363
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.8832889-CDS-P-wetherbeei_contig12952:1548..19111683185967.8832889-CDS-P-wetherbeei_contig12952:1548..1911Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12952 1549..1911 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12952.2.1prot_P-wetherbeei_contig12952.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12952 1549..1911 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12952.2.1

>prot_P-wetherbeei_contig12952.2.1 ID=prot_P-wetherbeei_contig12952.2.1|Name=mRNA_P-wetherbeei_contig12952.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
MAVVETERNGQVLIVRMNRPERLNALNTEMRQALAETWTEFRHDKQLEVA
IFTGTGRGFCAGEDMKETLTTGVPGGTRLKISNPFMDGTLEKPVIAAING
FAMGGGFMLVERTDLRVAVPE
back to top

mRNA from alignment at P-wetherbeei_contig12952:1549..1911+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12952.2.1 ID=mRNA_P-wetherbeei_contig12952.2.1|Name=mRNA_P-wetherbeei_contig12952.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig12952:1549..1911+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGTCGTCGAAACCGAACGCAATGGACAGGTTCTGATCGTGCGCAT
GAACCGGCCCGAGCGGCTGAATGCGCTCAACACCGAGATGCGTCAGGCGC
TGGCCGAGACCTGGACCGAATTCCGGCATGACAAGCAGCTCGAGGTGGCG
ATCTTCACCGGCACCGGCCGCGGCTTTTGCGCCGGCGAGGACATGAAGGA
GACGCTGACCACCGGCGTGCCCGGTGGCACGCGGCTGAAAATCTCGAATC
CCTTCATGGACGGCACGCTGGAGAAGCCGGTGATTGCGGCGATCAACGGC
TTTGCCATGGGCGGCGGCTTTATGCTGGTGGAACGCACCGATCTGCGCGT
CGCGGTGCCCGAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12952:1549..1911+

>mRNA_P-wetherbeei_contig12952.2.1 ID=mRNA_P-wetherbeei_contig12952.2.1|Name=mRNA_P-wetherbeei_contig12952.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig12952:1549..1911+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGTCGTCGAAACCGAACGCAATGGACAGGTTCTGATCGTGCGCAT
GAACCGGCCCGAGCGGCTGAATGCGCTCAACACCGAGATGCGTCAGGCGC
TGGCCGAGACCTGGACCGAATTCCGGCATGACAAGCAGCTCGAGGTGGCG
ATCTTCACCGGCACCGGCCGCGGCTTTTGCGCCGGCGAGGACATGAAGGA
GACGCTGACCACCGGCGTGCCCGGTGGCACGCGGCTGAAAATCTCGAATC
CCTTCATGGACGGCACGCTGGAGAAGCCGGTGATTGCGGCGATCAACGGC
TTTGCCATGGGCGGCGGCTTTATGCTGGTGGAACGCACCGATCTGCGCGT
CGCGGTGCCCGAG
back to top