mRNA_P-wetherbeei_contig12952.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12952.1.1
Unique NamemRNA_P-wetherbeei_contig12952.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A6N7FQ70_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FQ70_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 8.340e-124
Identity = 172/265 (64.91%), Postives = 212/265 (80.00%), Query Frame = 1
Query:   13 MSQTEAELAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            M  + ++L +Y  DG IAT+  NRPDK+NAFSDE+V+ L DALRR D D   H  I+ GNGR ++SGADV QRQLR+ EEF+RLGGPQ   A+AG+LLT+S+NWKPVISA HGYVLGL +G++L+SDLIV EEGT+ QVTE  RGL GAKYW +LHFRGA AF  +V LTGR F+AEEA  H +IDR+APKGQH+EVA++LA +V++NPPLS+R  VRTRRWY+DQ  REV +  AP K ++TEDF+EAARAF EKRPP PF+GR
Sbjct:    1 MGVSTSDLVEYRLDGRIATLGLNRPDKLNAFSDELVVALADALRRVDGDPGAHVAIIHGNGRAFSSGADVHQRQLRSREEFERLGGPQGFGAHAGDLLTRSVNWKPVISAVHGYVLGLAVGIVLESDLIVAEEGTQFQVTETSRGLGGAKYWALLHFRGAAAFGTQVALTGRFFSAEEAFEHGVIDRLAPKGQHLEVARELAAEVDKNPPLSVRATVRTRRWYLDQLSREVAMQTAPLKLYLTEDFQEAARAFTEKRPPLPFEGR 265          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A6A7KU55_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KU55_9PROT)

HSP 1 Score: 338 bits (866), Expect = 5.510e-114
Identity = 162/267 (60.67%), Postives = 209/267 (78.28%), Query Frame = 1
Query:   10 AMSQTEAE-LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            +M+Q++ E L +YE  GNI T+  NRP+K+NAFSDE+V  L + LRR D D++ H  I+ G GR ++SGADV QRQLR+ EEF++ GGPQA  A++ +LLTKS+NWKPVI+A HGYVLGL IG++ + DL+V EEGTK Q+TE PRGL  +KYWG+L++RG  AF  EV LTGR FTAEE LA  LI+RVAPKG+ +EVA +LA++V +NPPLS+R  VRTRRWYM+Q  RE+++  AP K +++EDFKEAARAF EKR P PFKGR
Sbjct:   15 SMTQSDLEGLVEYERKGNIVTLTLNRPEKLNAFSDELVAALMEGLRRFDGDNEAHLAIITGKGRAFSSGADVHQRQLRSREEFEKYGGPQAFGAHSSDLLTKSVNWKPVIAAPHGYVLGLAIGIVFECDLVVAEEGTKFQITETPRGLGASKYWGLLNYRGGAAFGTEVALTGRFFTAEECLAAGLINRVAPKGKFLEVANELAQEVCKNPPLSVRATVRTRRWYMEQLTREIMMQTAPLKLYLSEDFKEAARAFAEKRKPGPFKGR 281          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A537QHH5_9PROT (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QHH5_9PROT)

HSP 1 Score: 329 bits (844), Expect = 6.320e-111
Identity = 163/265 (61.51%), Postives = 200/265 (75.47%), Query Frame = 1
Query:   13 MSQTEAELAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            MS+T   L  Y+    IAT+  NRPD++NAFSDE+V  L DALRR D+D +    I+ G GR ++SGADV QRQLR  EEF+ LGGPQ   AN+G+LLT+S+NWKPVI+A HGY +GL +G++L+ DLIV E GTK QVTE  RGL GAKYW +L+FRG  A ANEV LTGR FTAEEALA  +I+RVAP+GQH+ +A +LA +V +NPPLS+R  VRTRRWYMDQ  REV +  AP K +++EDF EAARAF EKR P PFKGR
Sbjct:    1 MSET---LVHYDCKDQIATLTLNRPDRLNAFSDELVRHLMDALRRFDLDLEAQVAIICGKGRAFSSGADVHQRQLRKREEFEALGGPQGWGANSGDLLTRSVNWKPVIAAPHGYAMGLALGIVLECDLIVAEAGTKFQVTETSRGLGGAKYWALLNFRGGAALANEVALTGRFFTAEEALAAGIINRVAPEGQHLHIAHELAAEVAKNPPLSVRATVRTRRWYMDQLEREVTMQTAPLKLYLSEDFHEAARAFAEKRQPGPFKGR 262          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A1F2ZYT6_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZYT6_9PROT)

HSP 1 Score: 328 bits (841), Expect = 2.070e-110
Identity = 156/258 (60.47%), Postives = 197/258 (76.36%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            L +Y  +G I T+  NRP+K+NAFSDE+V  L DAL R D+D+     IL G GR ++SGADVQQRQLR+ EEF RLGGPQ    ++ +LLTK++NWKPVI+AAHGYVLGL +G++L+ DL+V EEGTK Q+TE  RGL   KYW ++H+RG GAF  E  LTGR FTAEEA   NLI+RVA KG++++VA+DLAR+V +NPPLS+R  VR RRWYMD+  REV+   AP + ++TEDF+EAARAF EKR  KPFKGR
Sbjct:    9 LVEYAREGEIVTLTLNRPEKLNAFSDELVGALSDALHRFDMDEKAQIAILNGRGRAFSSGADVQQRQLRSREEFLRLGGPQGRGTHSADLLTKAVNWKPVIAAAHGYVLGLSVGIVLECDLVVAEEGTKFQITETSRGLGAGKYWALMHYRGGGAFTMEAALTGRFFTAEEAFKANLINRVAAKGKYLDVARDLAREVTKNPPLSVRSTVRMRRWYMDRLSREVMFQTAPERLYLTEDFQEAARAFTEKRKSKPFKGR 266          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A521LF61_9HYPH (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LF61_9HYPH)

HSP 1 Score: 327 bits (837), Expect = 6.830e-110
Identity = 157/258 (60.85%), Postives = 198/258 (76.74%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            L  YE DG + T+  NRP+K+NAF+DE+V  L +AL R D D+  H  IL G GR ++SGADVQQRQLR+ EEF +LGGPQ    ++ +LLTKS+NWKPVI+AAHGYVLGL +G++L+ DLIV EEGT+ Q+TE  RGL   KYW ++H+RG GAF  E  LTGR FTA+EAL  NLI+RVAPKG+H+EVA++LA +V +NPPLS+R  VR RR YMD+  REV+ M AP + ++TEDF EAARAF EKR P+PFKGR
Sbjct:    3 LVNYEQDGEVVTLTLNRPEKLNAFNDELVGALGEALHRFDADESAHIAILCGAGRAFSSGADVQQRQLRSREEFLKLGGPQGRGTHSSDLLTKSVNWKPVIAAAHGYVLGLSVGIVLECDLIVAEEGTQFQITETSRGLGAGKYWALMHYRGGGAFTMEAALTGRFFTADEALRANLINRVAPKGRHLEVARELAAEVLKNPPLSVRSTVRMRRHYMDKLSREVMFMGAPERLYLTEDFHEAARAFTEKRKPQPFKGR 260          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A6A7M0J8_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7M0J8_9PROT)

HSP 1 Score: 325 bits (833), Expect = 9.460e-109
Identity = 157/258 (60.85%), Postives = 197/258 (76.36%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            L  YE DG I T+  NRP+K+NAFSDE+V  L DAL R D DD+ H  IL GNGR ++SGADVQQRQLR+ EEF +LGGPQ    ++ +LLTK++NWKPVI+A HGYVLGL +G++L+ DLIV EEGT+ Q+TE  RGL   KYW ++H+RG GA   E  LTGR FTAEEA   NLI+RVAPKG+++EVA++LA QV +NPPLS+R  VR RR+YMD+  REV+ M AP + +++EDF+EAARAF EKR P  FKGR
Sbjct:   39 LVNYERDGRIVTLTLNRPEKLNAFSDELVGVLGDALHRFDTDDEAHIAILCGNGRAFSSGADVQQRQLRSREEFLKLGGPQGRGTHSADLLTKAVNWKPVIAAPHGYVLGLSVGIVLECDLIVAEEGTQFQITETSRGLGAGKYWALMHYRGGGALTMEAALTGRFFTAEEAFKANLINRVAPKGKYLEVARELAEQVLKNPPLSVRSTVRMRRYYMDRLSREVMFMGAPERLYLSEDFQEAARAFTEKRKPAKFKGR 296          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: UPI001C224C0C (enoyl-CoA hydratase-related protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C224C0C)

HSP 1 Score: 323 bits (828), Expect = 1.960e-108
Identity = 153/258 (59.30%), Postives = 198/258 (76.74%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            L  YE DG I T+  NRPDK+NAF+DE+V  L DAL R D++D+    I+ G GR ++SGADV+QRQLR+ EEF RLGGPQ    ++ +LLT+S+NWKPVI+A HGYVLGL +G++L+ DLIV EEGT+ Q+TE  RGL   +YWG++ FRG GAFA E    GR FTAEEALA NLI+RVAPKG+++++A++LAR V +NPPLS+R  VRTRRWYMD+  RE++   AP + +++EDF+EAARAF EKR P  FKGR
Sbjct:    9 LVDYERDGEIVTLTLNRPDKLNAFNDELVGALSDALHRFDMEDEAQIAIITGRGRAFSSGADVKQRQLRSREEFLRLGGPQGRGTHSADLLTRSVNWKPVIAAPHGYVLGLSVGIVLECDLIVAEEGTRFQITETSRGLGAGRYWGIMQFRGGGAFAMEAAFAGRYFTAEEALAANLINRVAPKGRYLDMARELARDVVKNPPLSVRSTVRTRRWYMDRMTREIMHQTAPERLYLSEDFQEAARAFTEKRKPAKFKGR 266          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A537V2X6_9PROT (Enoyl-CoA hydratase/isomerase family protein n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537V2X6_9PROT)

HSP 1 Score: 319 bits (818), Expect = 6.250e-107
Identity = 149/258 (57.75%), Postives = 198/258 (76.74%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
              +Y     IAT+  NRPDK+NA SDE+V +L +A RR D+D +    IL G GR + SGADV+QRQLR+ +EF++LGGPQ    N+ +LLT ++NWKPVI + HG+VLGLG+GL+L+SDLIV  EGT++Q+TE PRGL  ++YW +  +R AGAF +E+ LTGR FTAEEA    +I+R+AP+GQH+EVA++LA+QV +NPPLS+R  VRTRRWYM++  RE   M AP++ ++TEDF+EAARAF EKRPP PFKGR
Sbjct:    8 FVEYACADRIATITLNRPDKLNAVSDEVVRQLAEAFRRFDLDPEAEVAILNGRGRAFCSGADVRQRQLRSRDEFEKLGGPQGWGTNSADLLTHAVNWKPVICSVHGFVLGLGLGLMLESDLIVAAEGTRMQLTETPRGLGASRYWALFQYRAAGAFGDEIALTGRFFTAEEAFKAGIINRLAPEGQHLEVARELAQQVAKNPPLSVRTTVRTRRWYMERLTREAQFMAAPFRLYLTEDFQEAARAFAEKRPPGPFKGR 265          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A1T4T809_9HYPH (Enoyl-CoA hydratase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4T809_9HYPH)

HSP 1 Score: 319 bits (817), Expect = 7.480e-107
Identity = 151/258 (58.53%), Postives = 196/258 (75.97%), Query Frame = 1
Query:   34 LAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKGR 807
            L +YE +G +  +  NRP+K+NAFSDE+V  L +AL R DIDD+    IL GNGR ++SGADV QRQLR+ +EF +LGGPQ    ++ +LLTK++NWKPVI+A HGYVLGL +G++L+ DLIV EEGT+ Q+TE  RGL   KYWG++HFRG GAF  E  LTGR FTAEEAL  NLI+RVAPKG++++ A++LA +V +NPPLS+R  VR RRWYMD+  RE++   AP + + +EDF+EAARAF EKR P  FKGR
Sbjct:    3 LVEYEREGQVVILTLNRPEKLNAFSDELVGMLGEALHRFDIDDEAEIAILHGNGRAFSSGADVHQRQLRSRDEFLKLGGPQGRGTHSADLLTKAVNWKPVIAAPHGYVLGLSVGIVLECDLIVAEEGTRFQITETSRGLGAGKYWGLMHFRGGGAFTMEAALTGRFFTAEEALKANLINRVAPKGKYLDAARELAAEVIKNPPLSVRSTVRLRRWYMDRLSREIMHQTAPERLYFSEDFQEAARAFAEKRKPGKFKGR 260          
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Match: A0A6P2FAZ3_9BURK (2,3-dehydroadipyl-CoA hydratase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2FAZ3_9BURK)

HSP 1 Score: 310 bits (795), Expect = 1.950e-103
Identity = 150/264 (56.82%), Postives = 192/264 (72.73%), Query Frame = 1
Query:   13 MSQTEAELAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDDDIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTKSINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAKYWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKDLARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAARAFVEKRPPKPFKG 804
            MS+   +  +YE    IAT+ FNRP K+NAF+D MV+ L + L   DID      +L+G GR ++SGADV QRQLR+ E+ KR GG Q   A++ +L T++INWKPVI+A HG+ +GLG+G++L+S+++V EEGT+ QVTE  RGL  ++YW +L+FRGA +FA E  +TGR FTAEEALA  +IDRVAPKGQHV  A +LARQ+  NPPLS+R  VRTRRWYMDQ  RE  L   P K H+TEDFKE+ARAF EKR   PFKG
Sbjct:    1 MSENAQDFIRYECRDRIATISFNRPQKLNAFNDAMVMRLAEVLHEFDIDPAADVAVLRGEGRAFSSGADVHQRQLRSEEDLKRHGGSQGWGAHSADLFTRAINWKPVIAAPHGFAVGLGLGMVLESEMVVAEEGTRFQVTETSRGLASSRYWALLNFRGARSFATEAAITGRFFTAEEALAAGVIDRVAPKGQHVAQACELARQIAANPPLSVRATVRTRRWYMDQAEREAYLQTTPLKLHLTEDFKESARAFAEKRKAGPFKG 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12952.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7FQ70_9ACTN8.340e-12464.91Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A6A7KU55_9PROT5.510e-11460.67Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A537QHH5_9PROT6.320e-11161.51Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
A0A1F2ZYT6_9PROT2.070e-11060.47Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A521LF61_9HYPH6.830e-11060.85Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
A0A6A7M0J8_9PROT9.460e-10960.85Uncharacterized protein n=4 Tax=Alphaproteobacteri... [more]
UPI001C224C0C1.960e-10859.30enoyl-CoA hydratase-related protein n=1 Tax=Reyran... [more]
A0A537V2X6_9PROT6.250e-10757.75Enoyl-CoA hydratase/isomerase family protein n=3 T... [more]
A0A1T4T809_9HYPH7.480e-10758.53Enoyl-CoA hydratase n=1 Tax=Enhydrobacter aerosacc... [more]
A0A6P2FAZ3_9BURK1.950e-10356.822,3-dehydroadipyl-CoA hydratase n=2 Tax=unclassifi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12952contigP-wetherbeei_contig12952:544..1353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121933.AUHH01000019_gene2393
PFAMsECH_1
Model size810
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.48e-38
EggNOG OGsCOG1024@1|root,COG1024@2|Bacteria,2IAAA@201174|Actinobacteria
DescriptionEnoyl-CoA hydratase carnithine racemase
Cds size798
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.8502295-CDS-P-wetherbeei_contig12952:543..13411683185967.8502295-CDS-P-wetherbeei_contig12952:543..1341Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12952 544..1341 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.8610075-UTR-P-wetherbeei_contig12952:1341..13531683185967.8610075-UTR-P-wetherbeei_contig12952:1341..1353Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12952 1342..1353 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12952.1.1prot_P-wetherbeei_contig12952.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12952 544..1341 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12952.1.1

>prot_P-wetherbeei_contig12952.1.1 ID=prot_P-wetherbeei_contig12952.1.1|Name=mRNA_P-wetherbeei_contig12952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MSQTEAELAQYETDGNIATVRFNRPDKMNAFSDEMVIELQDALRRADIDD
DIHAIILKGNGRCYTSGADVQQRQLRTPEEFKRLGGPQAPNANAGELLTK
SINWKPVISAAHGYVLGLGIGLLLQSDLIVCEEGTKIQVTEIPRGLDGAK
YWGMLHFRGAGAFANEVTLTGRMFTAEEALAHNLIDRVAPKGQHVEVAKD
LARQVNRNPPLSIRGAVRTRRWYMDQFIREVILMNAPYKYHMTEDFKEAA
RAFVEKRPPKPFKGR*
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mRNA from alignment at P-wetherbeei_contig12952:544..1353-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12952.1.1 ID=mRNA_P-wetherbeei_contig12952.1.1|Name=mRNA_P-wetherbeei_contig12952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig12952:544..1353- (Phaeothamnion wetherbeei SAG_119_79)
GGGAGACCGGCGATGTCGCAGACCGAGGCCGAGCTGGCGCAATACGAGAC TGACGGCAACATCGCCACCGTCCGGTTCAACCGGCCGGACAAGATGAATG CCTTCAGCGACGAGATGGTGATCGAGCTGCAGGACGCCCTGCGCCGCGCC GACATCGACGACGACATCCATGCCATCATCCTGAAGGGCAACGGCCGCTG CTATACCAGCGGGGCCGATGTGCAGCAGCGCCAGCTTCGCACGCCGGAGG AATTCAAACGGCTCGGCGGTCCGCAGGCGCCGAATGCCAATGCCGGCGAA CTGCTGACAAAATCGATCAACTGGAAGCCGGTGATCAGCGCGGCGCACGG CTATGTGCTGGGCCTCGGCATCGGCCTGCTGCTGCAGAGCGACCTGATCG TCTGCGAGGAAGGCACGAAAATCCAGGTCACCGAAATTCCGCGCGGCCTG GATGGCGCGAAATACTGGGGCATGCTGCATTTTCGCGGCGCCGGCGCCTT CGCCAATGAGGTCACGCTGACCGGACGCATGTTCACCGCCGAGGAAGCGC TTGCGCACAACCTGATCGACCGGGTCGCGCCCAAGGGCCAGCATGTCGAG GTCGCGAAAGATCTGGCGCGCCAGGTGAACAGGAATCCGCCGCTGAGCAT TCGCGGCGCGGTGCGCACGCGGCGCTGGTACATGGACCAGTTCATCCGCG AAGTGATCCTGATGAACGCGCCGTACAAGTACCACATGACCGAAGACTTC AAGGAAGCCGCGCGCGCGTTCGTCGAGAAGCGTCCGCCCAAACCGTTCAA GGGCCGATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12952:544..1353-

>mRNA_P-wetherbeei_contig12952.1.1 ID=mRNA_P-wetherbeei_contig12952.1.1|Name=mRNA_P-wetherbeei_contig12952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig12952:544..1353- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCAGACCGAGGCCGAGCTGGCGCAATACGAGACTGACGGCAACAT
CGCCACCGTCCGGTTCAACCGGCCGGACAAGATGAATGCCTTCAGCGACG
AGATGGTGATCGAGCTGCAGGACGCCCTGCGCCGCGCCGACATCGACGAC
GACATCCATGCCATCATCCTGAAGGGCAACGGCCGCTGCTATACCAGCGG
GGCCGATGTGCAGCAGCGCCAGCTTCGCACGCCGGAGGAATTCAAACGGC
TCGGCGGTCCGCAGGCGCCGAATGCCAATGCCGGCGAACTGCTGACAAAA
TCGATCAACTGGAAGCCGGTGATCAGCGCGGCGCACGGCTATGTGCTGGG
CCTCGGCATCGGCCTGCTGCTGCAGAGCGACCTGATCGTCTGCGAGGAAG
GCACGAAAATCCAGGTCACCGAAATTCCGCGCGGCCTGGATGGCGCGAAA
TACTGGGGCATGCTGCATTTTCGCGGCGCCGGCGCCTTCGCCAATGAGGT
CACGCTGACCGGACGCATGTTCACCGCCGAGGAAGCGCTTGCGCACAACC
TGATCGACCGGGTCGCGCCCAAGGGCCAGCATGTCGAGGTCGCGAAAGAT
CTGGCGCGCCAGGTGAACAGGAATCCGCCGCTGAGCATTCGCGGCGCGGT
GCGCACGCGGCGCTGGTACATGGACCAGTTCATCCGCGAAGTGATCCTGA
TGAACGCGCCGTACAAGTACCACATGACCGAAGACTTCAAGGAAGCCGCG
CGCGCGTTCGTCGAGAAGCGTCCGCCCAAACCGTTCAAGGGCCGATAG
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