mRNA_P-wetherbeei_contig12947.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12947.2.1
Unique NamemRNA_P-wetherbeei_contig12947.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A074YFY9_AURSE (CHY-type domain-containing protein n=7 Tax=Aureobasidium TaxID=5579 RepID=A0A074YFY9_AURSE)

HSP 1 Score: 95.9 bits (237), Expect = 1.280e-23
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKH+LNA+V IRSPCC ++++C+ECH E+E H   P  ++  F+C  C   F   +  F+E D+ CPHC   FVL A+TP  RL
Sbjct:    1 MCKHVLNAQVSIRSPCCRKWFDCAECHAESETHDLKPTLEMV-FACKKCKKAFRKDVQEFEESDEYCPHCDNHFVLEAKTPHARL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A7H8R5B8_9EURO (CHY-type domain-containing protein n=2 Tax=Talaromyces TaxID=5094 RepID=A0A7H8R5B8_9EURO)

HSP 1 Score: 95.1 bits (235), Expect = 2.640e-23
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E E H      D+T F+C  C   F    S F+E D+ CPHC   FV+ A+TP+  L
Sbjct:    1 MCKHILNAQVAIRSPCCRKWFDCAECHQEQETHPLVQSFDMT-FACKKCKKCFRKDTSEFEESDEYCPHCDNHFVIDAKTPQAAL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A1E1KVH3_9HELO (CHY-type domain-containing protein n=5 Tax=Helotiales TaxID=5178 RepID=A0A1E1KVH3_9HELO)

HSP 1 Score: 94.7 bits (234), Expect = 3.650e-23
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E++ H      ++T F+C  C  +F      F+E D+ CPHC   FVL A TP+ RL
Sbjct:    1 MCKHILNAQVSIRSPCCRKWFDCAECHAESQSHPLLQQTEMT-FACKKCKKVFRKDAQEFEESDEYCPHCDNHFVLEAVTPKARL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: B8MBE9_TALSN (CHY-type domain-containing protein n=3 Tax=Talaromyces TaxID=5094 RepID=B8MBE9_TALSN)

HSP 1 Score: 94.7 bits (234), Expect = 3.650e-23
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKH+LNA+V IRSPCC ++++C+ECH E E H      D+T F+C  C   F    S F+E D+ CPHC   FV+ A+TP+  L
Sbjct:    1 MCKHVLNAQVSIRSPCCRKWFDCAECHQEQESHPLMQSFDMT-FACKKCKKCFRKDTSEFEESDEYCPHCDNHFVIEAKTPQASL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A395HIN0_ASPHC (CHY-type domain-containing protein n=6 Tax=Aspergillus TaxID=5052 RepID=A0A395HIN0_ASPHC)

HSP 1 Score: 94.4 bits (233), Expect = 5.170e-23
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E ERH  A  +++  F+C  C   F    + FDE D+ CPHC   FV+ A TP   L
Sbjct:    1 MCKHILNAQVAIRSPCCKKWFDCAECHQETERHPLAKASEMV-FACKKCKKCFRKDTAEFDESDEYCPHCDNHFVIEAVTPTPTL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A0F9XD14_TRIHA (CHY-type domain-containing protein n=6 Tax=Trichoderma TaxID=5543 RepID=A0A0F9XD14_TRIHA)

HSP 1 Score: 94.4 bits (233), Expect = 5.170e-23
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E E H      ++T F+C  C  +F      FDE D+ CPHC   +VL A+TP+  L
Sbjct:    1 MCKHILNAQVAIRSPCCRKWFDCAECHSEQESHPLKQSMEMT-FACKKCKKVFRKDAEEFDESDEYCPHCDNHYVLEAKTPKAAL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A1L9V5L9_ASPGL (CHY-type domain-containing protein n=4 Tax=Aspergillus TaxID=5052 RepID=A0A1L9V5L9_ASPGL)

HSP 1 Score: 94.4 bits (233), Expect = 5.170e-23
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E E H  A   ++T F+C  C   F    + F+E D+ CPHC   FVL A+TP+  L
Sbjct:    1 MCKHILNAQVAIRSPCCRKWFDCAECHQEQEPHALAKSPEMT-FACKKCKKCFRKDAAEFEESDEYCPHCDNHFVLEAKTPKPAL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A1V6PBI6_PENDC (CHY-type domain-containing protein n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6PBI6_PENDC)

HSP 1 Score: 94.0 bits (232), Expect = 7.330e-23
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E E H+     ++  F+C  C   F    + FDE D+ CPHC   FVL A TP  RL
Sbjct:    1 MCKHILNAQVAIRSPCCRKWFDCAECHQEQESHMLQKSQEMV-FACKKCKKCFRKDAAEFDESDEFCPHCDNHFVLEAVTPNARL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: W3WPC0_PESFW (CHY-type domain-containing protein n=2 Tax=Sporocadaceae TaxID=1812776 RepID=W3WPC0_PESFW)

HSP 1 Score: 94.0 bits (232), Expect = 7.330e-23
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKH+LNA+V IRSPCC ++++C+ECH E+E H   P  ++T F+C  C   F   + +F+E D+ CPHC   FVL A  P+  L
Sbjct:    1 MCKHVLNAQVSIRSPCCRKWFDCAECHHESESHTLKPTLEMT-FACKKCRKCFRKEVESFEEADEYCPHCDNHFVLEAVVPKPAL 84
[Close]
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Match: A0A8J8VYN9_9EURO (CHY-type zinc finger domain-containing protein n=1 Tax=Penicillium sp. RFL-2021a TaxID=2839758 RepID=A0A8J8VYN9_9EURO)

HSP 1 Score: 93.2 bits (230), Expect = 1.470e-22
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1 
Query:   22 MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCSGIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL 276
            MCKHILNA+V IRSPCC ++++C+ECH E E H      ++  F+C  C   F    S F+E D+ CPHC   FVL A+TP+  L
Sbjct:    1 MCKHILNAQVSIRSPCCRKWFDCAECHQEQESHTLKKSQEMI-FACKKCKKCFRKDASEFEESDEYCPHCDNHFVLEAKTPQAAL 84
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12947.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A074YFY9_AURSE1.280e-2348.24CHY-type domain-containing protein n=7 Tax=Aureoba... [more]
A0A7H8R5B8_9EURO2.640e-2349.41CHY-type domain-containing protein n=2 Tax=Talarom... [more]
A0A1E1KVH3_9HELO3.650e-2348.24CHY-type domain-containing protein n=5 Tax=Helotia... [more]
B8MBE9_TALSN3.650e-2348.24CHY-type domain-containing protein n=3 Tax=Talarom... [more]
A0A395HIN0_ASPHC5.170e-2349.41CHY-type domain-containing protein n=6 Tax=Aspergi... [more]
A0A0F9XD14_TRIHA5.170e-2348.24CHY-type domain-containing protein n=6 Tax=Trichod... [more]
A0A1L9V5L9_ASPGL5.170e-2349.41CHY-type domain-containing protein n=4 Tax=Aspergi... [more]
A0A1V6PBI6_PENDC7.330e-2349.41CHY-type domain-containing protein n=1 Tax=Penicil... [more]
W3WPC0_PESFW7.330e-2347.06CHY-type domain-containing protein n=2 Tax=Sporoca... [more]
A0A8J8VYN9_9EURO1.470e-2248.24CHY-type zinc finger domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12947contigP-wetherbeei_contig12947:1306..1858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog63577.G9P4F3
PFAMszf-CHY
Model size276
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0008270,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045041,GO:0045184,GO:0046872,GO:0046907,GO:0046914,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:1990542
Exons3
Evalue4.54e-24
EggNOG OGsKOG1940@1|root,KOG1940@2759|Eukaryota,3A3N6@33154|Opisthokonta,3P3UA@4751|Fungi,3QV9K@4890|Ascomycota,21A5T@147550|Sordariomycetes,3TIG1@5125|Hypocreales,3U2PJ@5129|Hypocreaceae
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_003420.1
DescriptionCHY zinc finger
Cds size255
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.525893-UTR-P-wetherbeei_contig12947:1305..13261683185967.525893-UTR-P-wetherbeei_contig12947:1305..1326Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12947 1306..1326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.5383856-CDS-P-wetherbeei_contig12947:1326..13921683185967.5383856-CDS-P-wetherbeei_contig12947:1326..1392Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12947 1327..1392 +
1683185967.556466-CDS-P-wetherbeei_contig12947:1541..16481683185967.556466-CDS-P-wetherbeei_contig12947:1541..1648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12947 1542..1648 +
1683185967.5670896-CDS-P-wetherbeei_contig12947:1776..18581683185967.5670896-CDS-P-wetherbeei_contig12947:1776..1858Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12947 1777..1858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12947.2.1prot_P-wetherbeei_contig12947.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12947 1327..1858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12947.2.1

>prot_P-wetherbeei_contig12947.2.1 ID=prot_P-wetherbeei_contig12947.2.1|Name=mRNA_P-wetherbeei_contig12947.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp
MCKHILNARVKIRSPCCNEFYECSECHDEAERHVQAPPADITTFSCNCCS
GIFFVTLSTFDERDKRCPHCKILFVLPAETPEGRL
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mRNA from alignment at P-wetherbeei_contig12947:1306..1858+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12947.2.1 ID=mRNA_P-wetherbeei_contig12947.2.1|Name=mRNA_P-wetherbeei_contig12947.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=553bp|location=Sequence derived from alignment at P-wetherbeei_contig12947:1306..1858+ (Phaeothamnion wetherbeei SAG_119_79)
CCTAGCTCTGCTAGGCAACGCATGTGCAAGCACATCTTGAACGCCCGTGT
GAAGATTAGGAGCCCCTGTTGCAACGAGTTTTACGAAGTAAGTCAGACGC
AAAAACTCAGGGTGCACCAGAATGAGCACCTGGGCCATCGTGCAGCCCGT
GTGACGATGTATAACTTGTATCCCTCATGAAATTTCGGTTTCATCCTCCC
TTTCGCTTCGTCACTCCCTCTCTCAATCCCACACAGTGCTCTGAGTGCCA
TGACGAGGCGGAACGGCACGTCCAGGCGCCTCCGGCCGACATTACAACAT
TTTCGTGCAATTGTTGCAGCGGCATCTTCTTTGTAACCTTAAGGTAAAAT
ACATCTCTAACCCCTTTCGGTTGTTCCTTCTGTACTCCTTGTTATCTTCG
CCTCGAGCAACGCTAATACTTTCTAGGAGATCACTCCGCCGCGCTATCCA
CTCTTTGTTGACATTTGACAGTACATTTGATGAGAGAGATAAGCGCTGCC
CGCACTGCAAGATTTTGTTTGTACTTCCGGCGGAGACGCCGGAAGGGCGG
CTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12947:1306..1858+

>mRNA_P-wetherbeei_contig12947.2.1 ID=mRNA_P-wetherbeei_contig12947.2.1|Name=mRNA_P-wetherbeei_contig12947.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig12947:1306..1858+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCAAGCACATCTTGAACGCCCGTGTGAAGATTAGGAGCCCCTGTTG
CAACGAGTTTTACGAATGCTCTGAGTGCCATGACGAGGCGGAACGGCACG
TCCAGGCGCCTCCGGCCGACATTACAACATTTTCGTGCAATTGTTGCAGC
GGCATCTTCTTTGTAACCTTAAGTACATTTGATGAGAGAGATAAGCGCTG
CCCGCACTGCAAGATTTTGTTTGTACTTCCGGCGGAGACGCCGGAAGGGC
GGCTT
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