mRNA_P-wetherbeei_contig12932.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12932.2.1
Unique NamemRNA_P-wetherbeei_contig12932.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A2E2BAF9_9GAMM (Cytochrome c oxidase subunit 1 n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BAF9_9GAMM)

HSP 1 Score: 714 bits (1843), Expect = 8.560e-257
Identity = 352/381 (92.39%), Postives = 364/381 (95.54%), Query Frame = 1
Query:    4 MSEAATHHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            MSE ATHH  D HG H  GI RWLTTTNHKDIGT+YL+FSL+MFFIGGSMAM IR ELFQPGLQFVDPQF+NSM TMHAL+MIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFT+LLST+FMPGG PAGGWTMYPPLVLQTG AFPFLIFAVHFMGASSIAGAIN++ATV NMRAPGMTL+KLPLFVWTWIIT FLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGY+SMVYAT AIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFA+ FVILFTIGGFSGLMLGVTPVDFQYH
Sbjct:    1 MSEVATHHHDDHHGAHATGIMRWLTTTNHKDIGTLYLLFSLMMFFIGGSMAMXIRXELFQPGLQFVDPQFYNSMVTMHALIMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTMLLSTLFMPGGAPAGGWTMYPPLVLQTGDAFPFLIFAVHFMGASSIAGAINVVATVXNMRAPGMTLMKLPLFVWTWIITGFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYSSMVYATGAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFALGFVILFTIGGFSGLMLGVTPVDFQYH 381          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A1Z8WVA7_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WVA7_9GAMM)

HSP 1 Score: 687 bits (1773), Expect = 3.850e-246
Identity = 335/382 (87.70%), Postives = 361/382 (94.50%), Query Frame = 1
Query:    1 SMSEAATHHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            SM+  + HH+H    + P G +RWLTTTNHKDIG+MYL+FSLIMFFIGG+MAM+IR ELFQPGLQFVDPQF+NSM TMHAL+MIFG VMPAWTGFANW+IPMMIGAPDMALPRLNNWSFWILPFAF+LLL T+F+PGG PAGGWTMYPPLVLQTGAAFPFLIFAVHF+GASSI GAIN++ATVFNMRAPGMTLLKLPLFVWTWIIT FLLIAS+PVLAGAVTMLLTDK+FGT+FFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFG+VSAIIPTFARKPLFGY SMVYA AAIAFLSFIVWAHHMFTVGMPLAGELFFMYTT+LIAVPTGVKVFNWVATMW+ +MTFETPMLFA+ FVILFTIGGFSGLMLGVTPVDFQYH
Sbjct:    4 SMNLDSGHHEH----HAPSGWTRWLTTTNHKDIGSMYLIFSLIMFFIGGAMAMIIRLELFQPGLQFVDPQFYNSMVTMHALIMIFGVVMPAWTGFANWLIPMMIGAPDMALPRLNNWSFWILPFAFSLLLLTLFIPGGAPAGGWTMYPPLVLQTGAAFPFLIFAVHFLGASSIGGAINVLATVFNMRAPGMTLLKLPLFVWTWIITGFLLIASLPVLAGAVTMLLTDKYFGTSFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGVVSAIIPTFARKPLFGYQSMVYAVAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTILIAVPTGVKVFNWVATMWKGAMTFETPMLFALGFVILFTIGGFSGLMLGVTPVDFQYH 381          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A351MCL8_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MCL8_9GAMM)

HSP 1 Score: 676 bits (1745), Expect = 5.640e-242
Identity = 333/382 (87.17%), Postives = 356/382 (93.19%), Query Frame = 1
Query:    4 MSEAATHHDHDDHGYHPG-GISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            MS AA H DH +H + P  GI RWL TTNHKDIGTMY+VF+LIMFFIGG+MAMVIRAELFQPGLQ VDPQFFNSMTTMHALVMIFGAVMPA+ G ANWM+P+MIGAPDMALPRLNNWSFWI+PFAF LLLST+F+PGG PAGGWTMY PLVLQTG AFPFLI AVH MG SS+ GAINIIAT+FNMRAPG+T +KLPLFVWTWIITAFLLI SIPVLAGAVTMLLTDK+FGT+FF+AAGGGDPVMFQHIFWFFGHPEVYI+ILPAFGIVSAIIPTFARKPLFGY SMVYATA+IAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMW+ SMTFETPMLFA+ FV+LFTIGGFSGLMLGVTPVDFQYH
Sbjct:    1 MSHAAAHADHHEHHHGPAKGIGRWLYTTNHKDIGTMYMVFALIMFFIGGAMAMVIRAELFQPGLQLVDPQFFNSMTTMHALVMIFGAVMPAFVGLANWMVPVMIGAPDMALPRLNNWSFWIMPFAFLLLLSTLFLPGGAPAGGWTMYAPLVLQTGEAFPFLILAVHMMGISSVLGAINIIATIFNMRAPGLTYMKLPLFVWTWIITAFLLITSIPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVMFQHIFWFFGHPEVYIMILPAFGIVSAIIPTFARKPLFGYESMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWRGSMTFETPMLFALGFVVLFTIGGFSGLMLGVTPVDFQYH 382          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A6M1YBZ9_9GAMM (Cytochrome c oxidase subunit 1 n=3 Tax=Chromatiales TaxID=135613 RepID=A0A6M1YBZ9_9GAMM)

HSP 1 Score: 660 bits (1703), Expect = 1.290e-235
Identity = 316/377 (83.82%), Postives = 348/377 (92.31%), Query Frame = 1
Query:   16 ATHHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            ATH +H DHG+HP G+ RWLTTTNHKDIGTMYLVFSL MFF+GG+MA+V+RAELFQPGLQFVDP FFN MTTMHAL+MIFGAVMPA+ G ANWM+P+ IGAPDMALPRLNNWSFWILPFAFTLLL T+F+PGG PA GWTMYPPLVLQTG AFPFLIFA+H MG SSI GAINII T+ NMRAPGMTL+K+PLF WTW+ITA+LLI  +PVLAGAVTMLLTDK+FGT+FF+AAGGGDPVMFQHIFWFFGHPEVYI+ILPAFGIVS IIPTFARKPLFGYA+MVYATA+IAFLSFIVWAHHMFTVGMPLAG+LFFM+TT+LIAVPTGVKVFNWVATMW+ +MTFETPMLFAIAFV LFTIGGFSGLML + P D QYH
Sbjct:    4 ATHAEHGDHGHHPTGLLRWLTTTNHKDIGTMYLVFSLTMFFVGGAMALVVRAELFQPGLQFVDPGFFNQMTTMHALIMIFGAVMPAFVGLANWMVPLQIGAPDMALPRLNNWSFWILPFAFTLLLLTLFLPGGAPASGWTMYPPLVLQTGNAFPFLIFAIHLMGLSSIMGAINIIVTIMNMRAPGMTLMKMPLFTWTWLITAYLLILVMPVLAGAVTMLLTDKYFGTSFFAAAGGGDPVMFQHIFWFFGHPEVYIMILPAFGIVSEIIPTFARKPLFGYAAMVYATASIAFLSFIVWAHHMFTVGMPLAGQLFFMFTTMLIAVPTGVKVFNWVATMWRGAMTFETPMLFAIAFVFLFTIGGFSGLMLAIVPADLQYH 380          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A426QK12_9GAMM (Cytochrome c oxidase subunit 1 n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A426QK12_9GAMM)

HSP 1 Score: 655 bits (1689), Expect = 1.740e-233
Identity = 316/382 (82.72%), Postives = 352/382 (92.15%), Query Frame = 1
Query:    4 MSEAATHHDHDDHGYHPG-GISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            M+ A  H  HDDHG  P  G+SRWL TTNHKDIGT+YL+F+L+MFF+GGSMAM IRAELF+PGLQFV+P FFNS+TTMHALVMIFGAVMPA+ G ANW+IPMMIGAPDMALPR+NNWSFWILPFAFTLLLST FM GG PAGGWT+YPPLVLQTG AFPFLIFA+H MG SSI GAIN++ T+ NMRAPGMT++K+PLFVWTW+ITA+LLIA +PVLAGAVTMLLTDKFFGT+FF+AAGGGDPVMFQHIFWFFGHPEVYI+ILPAFGIVS IIPTFARKPLFGY+SMVYATA+IAFLSFIVWAHHMFTVGMPLAGELFFMY T+LIAVPTGVKVFNWV+TMW+ SMTFETPMLFA+ FV++FTIGGFSGLML + PVDFQYH
Sbjct:    1 MTTATAHEAHDDHG--PARGLSRWLFTTNHKDIGTLYLLFALLMFFVGGSMAMAIRAELFEPGLQFVNPMFFNSLTTMHALVMIFGAVMPAFVGLANWLIPMMIGAPDMALPRMNNWSFWILPFAFTLLLSTFFMEGGAPAGGWTIYPPLVLQTGDAFPFLIFAIHLMGISSIMGAINVVVTILNMRAPGMTMMKMPLFVWTWLITAYLLIAVMPVLAGAVTMLLTDKFFGTSFFTAAGGGDPVMFQHIFWFFGHPEVYIMILPAFGIVSQIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYATMLIAVPTGVKVFNWVSTMWRGSMTFETPMLFALGFVVMFTIGGFSGLMLAIAPVDFQYH 380          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A0D6ETV2_9PROT (Cytochrome c oxidase subunit 1 n=8 Tax=Methylophilaceae TaxID=32011 RepID=A0A0D6ETV2_9PROT)

HSP 1 Score: 655 bits (1689), Expect = 2.150e-233
Identity = 317/375 (84.53%), Postives = 347/375 (92.53%), Query Frame = 1
Query:   22 HHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            H DHD H + P GI RWL +TNHKDIGTMYLVFSLIMFF+GGSMAM+IRAELFQPGLQFVDPQF+NSM T+HALVMIFGAVMPA  G ANWMIP+MIGAPDMALPR+NN SFWI+PFAF LLL T+FM GGGPA GWTMYPPLVLQTG AFP+LIFAVHF+G SSI G+INIIATVFNMRAPGMTL++LPLFVWTW+ITAFLLIAS+PVLAGAVTMLLTDK+FGT+FF+AAGGGDPV+FQHIFWFFGHPEVYIL LPAFGI+S IIPTFARKPLFGYASMVYATA+IA LSF VW HHMFTVG+P+ GELFFMY T+LIAVPTGVKVFNWVATMW+ +MTFE PMLF+IAFVILFTIGGFSGLMLG+TPVDFQYH
Sbjct:    6 HADHDHHDHKPTGIKRWLFSTNHKDIGTMYLVFSLIMFFVGGSMAMIIRAELFQPGLQFVDPQFYNSMVTVHALVMIFGAVMPAGVGLANWMIPIMIGAPDMALPRMNNMSFWIMPFAFALLLGTLFMEGGGPASGWTMYPPLVLQTGKAFPYLIFAVHFLGISSIMGSINIIATVFNMRAPGMTLMRLPLFVWTWVITAFLLIASMPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVLFQHIFWFFGHPEVYILALPAFGIISQIIPTFARKPLFGYASMVYATASIAILSFFVWGHHMFTVGLPITGELFFMYMTMLIAVPTGVKVFNWVATMWKGAMTFEAPMLFSIAFVILFTIGGFSGLMLGITPVDFQYH 380          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A369CHJ4_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CHJ4_9GAMM)

HSP 1 Score: 654 bits (1688), Expect = 2.550e-233
Identity = 317/378 (83.86%), Postives = 352/378 (93.12%), Query Frame = 1
Query:   16 ATHHDHDDHGYHPG-GISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            A H +H +HG  P  G+ RW+TTTNHKDIGT+YL+F+L MFF+GG+MAMVIRAELFQPGLQFV+PQFFN MTTMHALVMIFGAVMPA+ G ANW IPMMIGAPDMALPR+NNWSFW+LPFAF +LLST+F+ GGGPAGGWTMYPPL+LQTG A PF+IFAVH MG SS+ GAIN+I TV NMRAPGMTL+K+PLFVWTW+ITAFLLIA++PVLAGAVTMLLTD++FGTAFF+AAGGGDPVM+QHIFWFFGHPEVYI+ILPAFGIVS IIPTFARKPLFGY+SMVYATA+IAFLSFIVWAHHMFTVGMPLAGELFFMYTT+LIAVPTGVKVFNWVATMW+ SMTFETPMLFAIAFV LFTIGGFSGLML +TPVDFQYH
Sbjct:    6 AAHGEHTEHG--PARGLMRWVTTTNHKDIGTLYLLFALTMFFVGGAMAMVIRAELFQPGLQFVEPQFFNQMTTMHALVMIFGAVMPAFVGLANWQIPMMIGAPDMALPRMNNWSFWLLPFAFAMLLSTLFLTGGGPAGGWTMYPPLMLQTGEALPFVIFAVHLMGISSVMGAINVIVTVLNMRAPGMTLMKMPLFVWTWLITAFLLIAAMPVLAGAVTMLLTDRYFGTAFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMYTTMLIAVPTGVKVFNWVATMWRGSMTFETPMLFAIAFVFLFTIGGFSGLMLAITPVDFQYH 381          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A833MTX2_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833MTX2_9GAMM)

HSP 1 Score: 652 bits (1681), Expect = 2.570e-232
Identity = 309/372 (83.06%), Postives = 351/372 (94.35%), Query Frame = 1
Query:   31 HDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            H++HG+ P G+ RWL TTNHK+IG++YL+F+L+MFFIGG+MAMVIRAELFQPGLQ VDP FFN MTTMHALVMIFGAVMPA+TG ANWMIP+M+G PDMALPR+NN SFWILPFAF +LLST+FMPGGGPAGGWTMYPPL+LQTGAAFPF+IFAVH MG SSI GAIN++ATV NMRAPGMTL+K+PLFVWTW+ITAFLLIA++PVLAGA+TMLLTD++FGT+FF+AAGGGDPV++QHIFWFFGHPEVYI+ILPAFGIVS IIPTFARKPLFGY+SMVYATA+IAFLSFIVWAHHMFTVGMPL+GELFFMY T+LI+VPTGVKVFNW ATMW+ +MTFETPMLFAIAFVILFTIGGFSGLML +TP DFQYH
Sbjct:    6 HENHGHAPSGLGRWLLTTNHKEIGSLYLLFALLMFFIGGAMAMVIRAELFQPGLQVVDPYFFNQMTTMHALVMIFGAVMPAFTGLANWMIPLMVGGPDMALPRMNNLSFWILPFAFIMLLSTLFMPGGGPAGGWTMYPPLMLQTGAAFPFVIFAVHLMGLSSIMGAINVVATVLNMRAPGMTLMKMPLFVWTWLITAFLLIATMPVLAGAITMLLTDQYFGTSFFNAAGGGDPVLYQHIFWFFGHPEVYIMILPAFGIVSTIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLSGELFFMYATMLISVPTGVKVFNWAATMWRGAMTFETPMLFAIAFVILFTIGGFSGLMLAITPADFQYH 377          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A7C1H8R5_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1H8R5_9GAMM)

HSP 1 Score: 652 bits (1681), Expect = 2.660e-232
Identity = 312/376 (82.98%), Postives = 350/376 (93.09%), Query Frame = 1
Query:   19 THHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            THHD      HP GI RWL TTNHKDIGT+YL+F+L+MFF+GG+MA+VIRAELF+PGLQ V+PQFFNSMTTMHALVMIFG VMPA+TG ANW+IPMM+GA DMALPR+NNWSFWILPFAFT+LLST+FM GGGPAGGWTMYPPL+LQTG AFPF+IFA+H MG SSI G+IN+IAT+ NMRAPGM L+K+PLFVWTW+ITA+LLIA++PVLAGAVTMLLTDK+FGT+FF+AAGGGDPVMFQHIFWFFGHPEVYILILPAFGI S+IIPTFARKPLFGYASMVYATA+IAFLSFIVWAHHMFTVGMPLAGELFFM TT++IAVPTGVKVFNWVATMW+ SMTFETPMLFA+ FVI+FTIGGFSGLML + PVDFQYH
Sbjct:    8 THHDE-----HPSGIKRWLFTTNHKDIGTLYLLFALLMFFVGGAMALVIRAELFEPGLQMVEPQFFNSMTTMHALVMIFGVVMPAFTGLANWLIPMMVGATDMALPRMNNWSFWILPFAFTMLLSTLFMDGGGPAGGWTMYPPLMLQTGDAFPFVIFAIHLMGISSIMGSINVIATILNMRAPGMNLMKMPLFVWTWLITAYLLIATMPVLAGAVTMLLTDKYFGTSFFNAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIASSIIPTFARKPLFGYASMVYATASIAFLSFIVWAHHMFTVGMPLAGELFFMLTTMMIAVPTGVKVFNWVATMWKGSMTFETPMLFALGFVIMFTIGGFSGLMLAIAPVDFQYH 378          
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Match: A0A7C5KU27_9GAMM (Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KU27_9GAMM)

HSP 1 Score: 652 bits (1681), Expect = 2.760e-232
Identity = 313/381 (82.15%), Postives = 350/381 (91.86%), Query Frame = 1
Query:    4 MSEAATHHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSMAMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIPMMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLVLQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVWTWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIVWAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETPMLFAIAFVILFTIGGFSGLMLGVTPVDFQYH 1146
            MS A TH  H  H  H GG+ RW+ TTNHKDIGT+YL+FSL+MF +GG+MAMVIRAELF+PGLQFVDPQFFNSMTTMHALVMIFGAVMPA+ G ANW+IPMMIGAPDMALPR+NNWSFWILPFAF +LLST+FM GGGPAGGWT+YPPLVLQTG AFPF+IF++H MG SSI GAIN+I T+ NMRAPGMTL+K+PLFVWTW+ITA+LLIA +PVLAGAVTMLLTD+FFGT+FF+AAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVS IIPTFARKPLFGY+SMVYATA+IAFLSFIVWAHHMFTVGMPL GELFFMY T++IAVPTGVKVFNWV+TMW+ +MTFETPMLFA  FV++FTIGGFSGLML + PVDFQYH
Sbjct:    1 MSTATTHDGH--HEEHQGGLMRWVFTTNHKDIGTLYLLFSLLMFIVGGAMAMVIRAELFEPGLQFVDPQFFNSMTTMHALVMIFGAVMPAFVGLANWLIPMMIGAPDMALPRMNNWSFWILPFAFVMLLSTLFMEGGGPAGGWTLYPPLVLQTGDAFPFVIFSIHLMGISSIMGAINVIVTIVNMRAPGMTLMKMPLFVWTWLITAYLLIAVMPVLAGAVTMLLTDQFFGTSFFNAAGGGDPVMFQHIFWFFGHPEVYILILPAFGIVSQIIPTFARKPLFGYSSMVYATASIAFLSFIVWAHHMFTVGMPLGGELFFMYATMMIAVPTGVKVFNWVSTMWRGAMTFETPMLFATGFVVMFTIGGFSGLMLAIAPVDFQYH 379          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12932.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BAF9_9GAMM8.560e-25792.39Cytochrome c oxidase subunit 1 n=3 Tax=Gammaproteo... [more]
A0A1Z8WVA7_9GAMM3.850e-24687.70Cytochrome c oxidase subunit 1 n=1 Tax=Methylococc... [more]
A0A351MCL8_9GAMM5.640e-24287.17Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteo... [more]
A0A6M1YBZ9_9GAMM1.290e-23583.82Cytochrome c oxidase subunit 1 n=3 Tax=Chromatiale... [more]
A0A426QK12_9GAMM1.740e-23382.72Cytochrome c oxidase subunit 1 n=5 Tax=Gammaproteo... [more]
A0A0D6ETV2_9PROT2.150e-23384.53Cytochrome c oxidase subunit 1 n=8 Tax=Methylophil... [more]
A0A369CHJ4_9GAMM2.550e-23383.86Cytochrome c oxidase subunit 1 n=1 Tax=Thioalbus d... [more]
A0A833MTX2_9GAMM2.570e-23283.06Cytochrome c oxidase subunit 1 n=1 Tax=Alkalilimni... [more]
A0A7C1H8R5_9GAMM2.660e-23282.98Cytochrome c oxidase subunit 1 n=1 Tax=Thioalkaliv... [more]
A0A7C5KU27_9GAMM2.760e-23282.15Cytochrome c oxidase subunit 1 n=1 Tax=Gammaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12932contigP-wetherbeei_contig12932:770..1915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog713586.KB900536_gene1818
PFAMsCOX1
Model size1146
Max annot lvl135613|Chromatiales
KEGG rclassRC00016
KEGG koko:K02274
KEGG TC3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6
KEGG ReactionR00081
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00155
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.23e-232
EggNOG OGsCOG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,1RPC3@1236|Gammaproteobacteria,1WWX1@135613|Chromatiales
EC1.9.3.1
DescriptionCytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Cds size1143
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.0486317-UTR-P-wetherbeei_contig12932:769..7721683185967.0486317-UTR-P-wetherbeei_contig12932:769..772Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12932 770..772 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.0665524-CDS-P-wetherbeei_contig12932:772..19151683185967.0665524-CDS-P-wetherbeei_contig12932:772..1915Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12932 773..1915 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12932.2.1prot_P-wetherbeei_contig12932.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12932 773..1915 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12932.2.1

>prot_P-wetherbeei_contig12932.2.1 ID=prot_P-wetherbeei_contig12932.2.1|Name=mRNA_P-wetherbeei_contig12932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=381bp
MSEAATHHDHDDHGYHPGGISRWLTTTNHKDIGTMYLVFSLIMFFIGGSM
AMVIRAELFQPGLQFVDPQFFNSMTTMHALVMIFGAVMPAWTGFANWMIP
MMIGAPDMALPRLNNWSFWILPFAFTLLLSTVFMPGGGPAGGWTMYPPLV
LQTGAAFPFLIFAVHFMGASSIAGAINIIATVFNMRAPGMTLLKLPLFVW
TWIITAFLLIASIPVLAGAVTMLLTDKFFGTAFFSAAGGGDPVMFQHIFW
FFGHPEVYILILPAFGIVSAIIPTFARKPLFGYASMVYATAAIAFLSFIV
WAHHMFTVGMPLAGELFFMYTTVLIAVPTGVKVFNWVATMWQSSMTFETP
MLFAIAFVILFTIGGFSGLMLGVTPVDFQYH
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mRNA from alignment at P-wetherbeei_contig12932:770..1915+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12932.2.1 ID=mRNA_P-wetherbeei_contig12932.2.1|Name=mRNA_P-wetherbeei_contig12932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1146bp|location=Sequence derived from alignment at P-wetherbeei_contig12932:770..1915+ (Phaeothamnion wetherbeei SAG_119_79)
TCCATGAGTGAGGCCGCCACCCACCACGACCACGATGACCACGGCTATCA TCCAGGCGGCATCTCGCGCTGGTTGACCACCACCAACCACAAGGACATCG GCACGATGTACCTGGTCTTCTCGCTGATAATGTTCTTTATCGGCGGGTCG ATGGCGATGGTGATCCGCGCCGAACTGTTTCAGCCGGGGCTGCAGTTTGT CGATCCCCAGTTCTTCAATTCCATGACCACCATGCATGCGCTGGTCATGA TCTTCGGCGCCGTGATGCCGGCCTGGACCGGATTTGCGAACTGGATGATC CCGATGATGATCGGCGCGCCGGACATGGCCCTGCCGCGCCTCAATAACTG GAGCTTCTGGATTCTGCCTTTCGCCTTCACCTTGCTGCTGAGCACGGTGT TCATGCCTGGCGGTGGCCCGGCCGGTGGCTGGACCATGTATCCGCCGCTG GTCTTACAGACCGGTGCTGCTTTCCCCTTCCTGATCTTCGCTGTGCACTT CATGGGCGCGTCCTCGATCGCCGGCGCCATCAACATCATTGCCACCGTGT TCAATATGCGCGCGCCAGGCATGACCTTGTTGAAGCTGCCGCTGTTCGTG TGGACCTGGATCATCACCGCCTTCCTGCTGATTGCATCCATCCCGGTGCT GGCGGGTGCGGTCACCATGCTGCTCACCGATAAATTCTTCGGCACCGCAT TCTTCAGCGCGGCGGGCGGCGGTGATCCGGTGATGTTCCAGCACATCTTC TGGTTCTTCGGCCACCCCGAGGTCTACATTCTGATCCTGCCGGCTTTCGG TATCGTCTCGGCCATCATTCCGACCTTCGCGCGCAAGCCATTATTTGGTT ATGCCTCGATGGTGTACGCCACTGCCGCGATCGCCTTCCTGTCGTTCATC GTGTGGGCCCACCACATGTTCACGGTCGGCATGCCGCTCGCGGGCGAATT GTTCTTCATGTACACCACGGTGCTGATCGCGGTGCCTACCGGGGTGAAGG TCTTCAACTGGGTGGCCACCATGTGGCAGAGCTCAATGACTTTCGAGACC CCGATGTTGTTTGCCATCGCGTTCGTGATCCTGTTCACCATCGGCGGTTT CTCGGGCCTCATGCTCGGCGTGACGCCGGTCGACTTCCAGTATCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12932:770..1915+

>mRNA_P-wetherbeei_contig12932.2.1 ID=mRNA_P-wetherbeei_contig12932.2.1|Name=mRNA_P-wetherbeei_contig12932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1143bp|location=Sequence derived from alignment at P-wetherbeei_contig12932:770..1915+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGAGGCCGCCACCCACCACGACCACGATGACCACGGCTATCATCC
AGGCGGCATCTCGCGCTGGTTGACCACCACCAACCACAAGGACATCGGCA
CGATGTACCTGGTCTTCTCGCTGATAATGTTCTTTATCGGCGGGTCGATG
GCGATGGTGATCCGCGCCGAACTGTTTCAGCCGGGGCTGCAGTTTGTCGA
TCCCCAGTTCTTCAATTCCATGACCACCATGCATGCGCTGGTCATGATCT
TCGGCGCCGTGATGCCGGCCTGGACCGGATTTGCGAACTGGATGATCCCG
ATGATGATCGGCGCGCCGGACATGGCCCTGCCGCGCCTCAATAACTGGAG
CTTCTGGATTCTGCCTTTCGCCTTCACCTTGCTGCTGAGCACGGTGTTCA
TGCCTGGCGGTGGCCCGGCCGGTGGCTGGACCATGTATCCGCCGCTGGTC
TTACAGACCGGTGCTGCTTTCCCCTTCCTGATCTTCGCTGTGCACTTCAT
GGGCGCGTCCTCGATCGCCGGCGCCATCAACATCATTGCCACCGTGTTCA
ATATGCGCGCGCCAGGCATGACCTTGTTGAAGCTGCCGCTGTTCGTGTGG
ACCTGGATCATCACCGCCTTCCTGCTGATTGCATCCATCCCGGTGCTGGC
GGGTGCGGTCACCATGCTGCTCACCGATAAATTCTTCGGCACCGCATTCT
TCAGCGCGGCGGGCGGCGGTGATCCGGTGATGTTCCAGCACATCTTCTGG
TTCTTCGGCCACCCCGAGGTCTACATTCTGATCCTGCCGGCTTTCGGTAT
CGTCTCGGCCATCATTCCGACCTTCGCGCGCAAGCCATTATTTGGTTATG
CCTCGATGGTGTACGCCACTGCCGCGATCGCCTTCCTGTCGTTCATCGTG
TGGGCCCACCACATGTTCACGGTCGGCATGCCGCTCGCGGGCGAATTGTT
CTTCATGTACACCACGGTGCTGATCGCGGTGCCTACCGGGGTGAAGGTCT
TCAACTGGGTGGCCACCATGTGGCAGAGCTCAATGACTTTCGAGACCCCG
ATGTTGTTTGCCATCGCGTTCGTGATCCTGTTCACCATCGGCGGTTTCTC
GGGCCTCATGCTCGGCGTGACGCCGGTCGACTTCCAGTATCAC
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