mRNA_P-wetherbeei_contig1293.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A352KDT8_9PROT (Thioredoxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KDT8_9PROT) HSP 1 Score: 186 bits (471), Expect = 3.410e-59 Identity = 84/105 (80.00%), Postives = 96/105 (91.43%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPGLTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TT+VTD++F+ DVLNA PVLVDFWAEWCGPCKQIAPALEELSNEIPGLT+AKLN+D+NP M KYGVRGIPTMMIFQDGQV+ATKVGA+PK KI EWIK+++
Sbjct: 1 MATTSVTDQSFDEDVLNAPGPVLVDFWAEWCGPCKQIAPALEELSNEIPGLTIAKLNIDENPNMPTKYGVRGIPTMMIFQDGQVSATKVGALPKNKIAEWIKSAM 105
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A3C0TUX2_9PROT (Thioredoxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUX2_9PROT) HSP 1 Score: 185 bits (470), Expect = 4.840e-59 Identity = 86/105 (81.90%), Postives = 97/105 (92.38%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPGLTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TTTVTDE+FERDVLNA PVLVDFWAEWCGPC+QIAPALE +S+E+ LTVAKLNVDDNPGMAA+YGVRGIPTMMIFQ GQVAATKVGA+PK +I+EWIK++I
Sbjct: 1 MATTTVTDESFERDVLNADQPVLVDFWAEWCGPCRQIAPALEAISDEMQNLTVAKLNVDDNPGMAARYGVRGIPTMMIFQHGQVAATKVGALPKSRIEEWIKSTI 105
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A2D4VNL9_9HYPH (Thioredoxin n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VNL9_9HYPH) HSP 1 Score: 164 bits (416), Expect = 8.570e-51 Identity = 74/106 (69.81%), Postives = 93/106 (87.74%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TT VTD++F+ DVL+A+ PVLVDFWAEWCGPCKQI PALEEL+ + G +T+AK+N+D+NP + K+GVRGIPT+MIF+DGQVAATKVGA+PKGKIQEWI +S+
Sbjct: 1 MTTTKVTDDSFDTDVLDASGPVLVDFWAEWCGPCKQIGPALEELAKDYGGKITIAKINIDENPNVPTKFGVRGIPTLMIFKDGQVAATKVGAMPKGKIQEWIDSSL 106
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A2Z4UPN0_9HYPH (Thioredoxin n=3 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UPN0_9HYPH) HSP 1 Score: 163 bits (413), Expect = 2.460e-50 Identity = 73/106 (68.87%), Postives = 94/106 (88.68%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M T+ VTD++FE DV++A+ PVLVDFWAEWCGPCKQI+PALEE++ ++ LT+AKLN+D+NP + KYGVRGIPT+MIF+DGQVAATKVGA+PKGKI+EWI++ I
Sbjct: 1 MATSKVTDDSFEADVIDASQPVLVDFWAEWCGPCKQISPALEEIAGDLGDKLTIAKLNIDENPNVPTKYGVRGIPTLMIFKDGQVAATKVGALPKGKIKEWIESEI 106
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A2G2M0H4_9PROT (Thioredoxin n=2 Tax=root TaxID=1 RepID=A0A2G2M0H4_9PROT) HSP 1 Score: 163 bits (413), Expect = 2.700e-50 Identity = 71/107 (66.36%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASIA 318
MPT V+DENFE +VLNA PVLVDFWAEWCGPCKQI PALEELS E+ G +T+AK+N+D+NPG+ +KYGVRG+PT+M+F GQV+ATKVGA+PK KI +W+ ++++
Sbjct: 1 MPTIAVSDENFESEVLNANGPVLVDFWAEWCGPCKQIGPALEELSGEMAGKVTIAKVNIDENPGIPSKYGVRGVPTLMLFSGGQVSATKVGAMPKSKIADWLNSAVS 107
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A845Q8T2_9HYPH (Thioredoxin n=2 Tax=Parvibaculaceae TaxID=2813035 RepID=A0A845Q8T2_9HYPH) HSP 1 Score: 162 bits (411), Expect = 4.960e-50 Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEI-PGLTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TT VTDE+FE DV++A+ PVLVDFWAEWCGPCKQI PALEE++ E+ LT+AK+N+D+NP + KYGVRGIPT+MIF+DGQVAATKVGA+PK KI EWI SI
Sbjct: 1 MATTKVTDESFESDVIDASGPVLVDFWAEWCGPCKQIGPALEEIAGEMGEKLTIAKINIDENPNVPTKYGVRGIPTLMIFKDGQVAATKVGALPKSKIAEWIDESI 106
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A081BE48_9HYPH (Thioredoxin n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BE48_9HYPH) HSP 1 Score: 162 bits (411), Expect = 4.960e-50 Identity = 72/106 (67.92%), Postives = 93/106 (87.74%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TT VTD +FE DV++++ PVLVDFWAEWCGPCKQI PALEE++ ++ G +T+AK+N+D+NP KYGVRGIPT+M+F+DGQVAATKVGA+PKGKIQEWI++S+
Sbjct: 1 MATTKVTDGSFESDVIDSSTPVLVDFWAEWCGPCKQIGPALEEIAADLGGKVTIAKINIDENPNTPTKYGVRGIPTLMLFKDGQVAATKVGALPKGKIQEWIESSL 106
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A8J6LT68_9PROT (Thioredoxin n=1 Tax=Euryhalocaulis sp. TaxID=2744307 RepID=A0A8J6LT68_9PROT) HSP 1 Score: 162 bits (411), Expect = 5.980e-50 Identity = 72/107 (67.29%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASIA 318
M T VTD++F+ DVL ++ PVLVDFWAEWCGPCKQI PALE+++NE+ G +TVAK+N+DDNPG+ KYGVRGIPT+M+FQ+GQVA TKVGA+PK KI EWI+ ++A
Sbjct: 1 MATKNVTDDSFQSDVLESSGPVLVDFWAEWCGPCKQIGPALEDIANEMDGKVTVAKVNIDDNPGVPTKYGVRGIPTLMLFQNGQVAGTKVGAMPKSKISEWIEETVA 107
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A0A2A4SAC2_9HYPH (Thioredoxin n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4SAC2_9HYPH) HSP 1 Score: 162 bits (409), Expect = 1.000e-49 Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M TT VTD +FE DV++A+ PVLVDFWAEWCGPCKQI P+LEEL+ E+ G +T+AK+N+D+NP K+GVRGIPTMMIF+DGQVAATKVGA+PK KI EWIK SI
Sbjct: 1 MSTTKVTDASFETDVIDASGPVLVDFWAEWCGPCKQIGPSLEELAAEMGGDVTIAKINIDENPNTPTKFGVRGIPTMMIFKDGQVAATKVGALPKNKIAEWIKESI 106
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Match: A7HPC9_PARL1 (Thioredoxin n=10 Tax=Proteobacteria TaxID=1224 RepID=A7HPC9_PARL1) HSP 1 Score: 160 bits (405), Expect = 4.070e-49 Identity = 74/106 (69.81%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 1 MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPG-LTVAKLNVDDNPGMAAKYGVRGIPTMMIFQDGQVAATKVGAIPKGKIQEWIKASI 315
M T VTD +FE DVL+A PVLVDFWAEWCGPCKQI PALEE++ + G LT+AK+N+D+NP + KYGVRGIPT+MIF+DGQVAATKVGA+PKGKI EWI S+
Sbjct: 1 MATNKVTDASFEADVLDAAGPVLVDFWAEWCGPCKQIGPALEEIAKDYGGKLTIAKINIDENPNVPTKYGVRGIPTLMIFKDGQVAATKVGALPKGKIVEWIDNSL 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1293.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1293.2.1 >prot_P-wetherbeei_contig1293.2.1 ID=prot_P-wetherbeei_contig1293.2.1|Name=mRNA_P-wetherbeei_contig1293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp MPTTTVTDENFERDVLNATNPVLVDFWAEWCGPCKQIAPALEELSNEIPGback to top mRNA from alignment at P-wetherbeei_contig1293:5688..6011+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1293.2.1 ID=mRNA_P-wetherbeei_contig1293.2.1|Name=mRNA_P-wetherbeei_contig1293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig1293:5688..6011+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1293:5688..6011+ >mRNA_P-wetherbeei_contig1293.2.1 ID=mRNA_P-wetherbeei_contig1293.2.1|Name=mRNA_P-wetherbeei_contig1293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig1293:5688..6011+ (Phaeothamnion wetherbeei SAG_119_79)back to top |