mRNA_P-wetherbeei_contig12922.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12922.1.1
Unique NamemRNA_P-wetherbeei_contig12922.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12922.1.1 vs. uniprot
Match: D7FR35_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR35_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.230e-38
Identity = 97/250 (38.80%), Postives = 137/250 (54.80%), Query Frame = 1 
Query:   10 SAFVKVCLGEIGEALSMFSEVAVLAHRRQDAYLSVVAQQGVGLAHALMGHVTELDAAVEQCRMLTG-------GRRN--------------LLLESLMAYSAVYKGEILKATDHIAYVIPRFTRRRQFVFQIGLFLHLTVDALFTAVEFDLIKD-PVLLSSMLALGRKAVQALDGMAKVFDTLTPLLQLAKARWYFMYAREGAAERAIDLGLH-SEEFIQFPYAEGLLLLHSTRLTCLPDEERRARAREG 690
            SA+ K+C G+  EALSMF+EV   A    D YLS  +  G  L HA+ G++ E  A + + R +         GRR               +++E+L AY A  +G+   A   +     R +R     F  GLFLHL  DA FT +E D++   P     ++A  R  ++ L   A++FD ++PL QL +ARW  ++  +  AE+A+ LGL  SEE + FP+AEGLLLLHSTR+  LP +ERRARAR G
Sbjct: 2004 SAYAKLCSGDTPEALSMFNEVRDTAISHNDDYLSQASLHGAALVHAITGNMAEASAGLAKMRSIVEEDWARRRGRRGRTAAATEGTSHASLVVMETLGAYLAASRGDGKAALKGVCRASLRLSRAGALRFSSGLFLHLATDACFTILEQDMLPPGPDSYRRVIAAARLLIRTLGRFAQMFDLMSPLHQLGRARWSMLHGMDKVAEKALVLGLEISEEDVHFPFAEGLLLLHSTRIESLPMDERRARARRG 2253
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12922.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR35_ECTSI2.230e-3838.80Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12922contigP-wetherbeei_contig12922:725..1693 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FR35
PFAMsGuanylate_cyc
Model size690
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.66e-39
EggNOG OGsCOG2114@1|root,2QPPT@2759|Eukaryota
DescriptionAdenylate cyclase
Cds size690
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185966.6886654-CDS-P-wetherbeei_contig12922:724..9851683185966.6886654-CDS-P-wetherbeei_contig12922:724..985Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12922 725..985 +
1683185966.6992154-CDS-P-wetherbeei_contig12922:1264..16931683185966.6992154-CDS-P-wetherbeei_contig12922:1264..1693Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12922 1265..1693 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12922.1.1prot_P-wetherbeei_contig12922.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12922 725..1693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12922.1.1

>prot_P-wetherbeei_contig12922.1.1 ID=prot_P-wetherbeei_contig12922.1.1|Name=mRNA_P-wetherbeei_contig12922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp
MVLSAFVKVCLGEIGEALSMFSEVAVLAHRRQDAYLSVVAQQGVGLAHAL
MGHVTELDAAVEQCRMLTGGRRNLLLESLMAYSAVYKGEILKATDHIAYV
IPRFTRRRQFVFQIGLFLHLTVDALFTAVEFDLIKDPVLLSSMLALGRKA
VQALDGMAKVFDTLTPLLQLAKARWYFMYAREGAAERAIDLGLHSEEFIQ
FPYAEGLLLLHSTRLTCLPDEERRARAREG
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mRNA from alignment at P-wetherbeei_contig12922:725..1693+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12922.1.1 ID=mRNA_P-wetherbeei_contig12922.1.1|Name=mRNA_P-wetherbeei_contig12922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig12922:725..1693+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGCTGTCGGCCTTCGTCAAGGTCTGCCTTGGTGAGATCGGTGAGGC
GCTCTCCATGTTTTCCGAAGTCGCTGTCCTGGCGCACCGCCGGCAGGACG
CCTACTTGTCCGTCGTGGCGCAGCAGGGCGTCGGGCTTGCGCACGCCCTG
ATGGGGCACGTGACGGAGCTGGATGCGGCGGTGGAGCAGTGCCGGATGCT
GACCGGCGGCCGGCGGAACTTGCTGCTGGAGAGCCTCATGGCCTACTCGG
CCGTCTACAAGGTAAGTGGTTTCTGACTTAAAGTTGCCTGATTCCGGTTT
CTGAAAAAAAGGACTGCTTTCGTGGTATAGCGCAGGCAGGGGCGTCTGTG
GTCATTGCCGCCACACTGTTTGCTCGCATCCACCGGCCGCCATCTGCCTG
CCTTGAATGGTTTGTGACGCTGCCTCTCCTTCTGTCCACACCCTCCCCCA
ATTCCAAACGAAAACAAAGCAAATGAACGTATGAACCCCTTCACTCTTCT
CTCCTCCAACCATCGCCCAAACTCCTCCCCTTCTAACCAGGGGGAGATTT
TGAAGGCCACGGACCATATCGCCTACGTGATTCCGCGCTTCACGCGGAGG
CGGCAGTTTGTGTTCCAGATCGGCCTCTTCTTGCACCTGACGGTTGATGC
GCTCTTCACCGCCGTCGAGTTCGACCTCATCAAGGACCCCGTATTACTCA
GCTCCATGTTGGCGCTCGGCAGAAAAGCGGTCCAGGCCCTGGATGGCATG
GCCAAGGTCTTCGACACGCTGACGCCGCTCCTGCAGCTCGCCAAGGCGCG
CTGGTACTTCATGTATGCGCGCGAGGGCGCCGCCGAGCGCGCGATCGACC
TTGGGCTCCACTCGGAGGAGTTCATCCAGTTCCCCTATGCGGAGGGGCTG
TTACTGCTGCACTCGACGCGGCTGACGTGCCTTCCGGACGAGGAGCGGCG
GGCGCGCGCACGGGAGGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12922:725..1693+

>mRNA_P-wetherbeei_contig12922.1.1 ID=mRNA_P-wetherbeei_contig12922.1.1|Name=mRNA_P-wetherbeei_contig12922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig12922:725..1693+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGCTGTCGGCCTTCGTCAAGGTCTGCCTTGGTGAGATCGGTGAGGC
GCTCTCCATGTTTTCCGAAGTCGCTGTCCTGGCGCACCGCCGGCAGGACG
CCTACTTGTCCGTCGTGGCGCAGCAGGGCGTCGGGCTTGCGCACGCCCTG
ATGGGGCACGTGACGGAGCTGGATGCGGCGGTGGAGCAGTGCCGGATGCT
GACCGGCGGCCGGCGGAACTTGCTGCTGGAGAGCCTCATGGCCTACTCGG
CCGTCTACAAGGGGGAGATTTTGAAGGCCACGGACCATATCGCCTACGTG
ATTCCGCGCTTCACGCGGAGGCGGCAGTTTGTGTTCCAGATCGGCCTCTT
CTTGCACCTGACGGTTGATGCGCTCTTCACCGCCGTCGAGTTCGACCTCA
TCAAGGACCCCGTATTACTCAGCTCCATGTTGGCGCTCGGCAGAAAAGCG
GTCCAGGCCCTGGATGGCATGGCCAAGGTCTTCGACACGCTGACGCCGCT
CCTGCAGCTCGCCAAGGCGCGCTGGTACTTCATGTATGCGCGCGAGGGCG
CCGCCGAGCGCGCGATCGACCTTGGGCTCCACTCGGAGGAGTTCATCCAG
TTCCCCTATGCGGAGGGGCTGTTACTGCTGCACTCGACGCGGCTGACGTG
CCTTCCGGACGAGGAGCGGCGGGCGCGCGCACGGGAGGGG
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