mRNA_P-wetherbeei_contig12921.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12921.1.1
Unique NamemRNA_P-wetherbeei_contig12921.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12921.1.1 vs. uniprot
Match: A0A835ZA04_9STRA (DUF5672 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA04_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.480e-18
Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 1 
Query:    1 EHVLIGQLDTVILRPIPSLYFKFAFVGAPCGLITGNQYILNGGFSLRRRSIMLEITTTHPGNGEDA------EDIYFTRILRAKRFPIPTIQEAMAFCAETLVCNKVYGPVGIHGTTKYWI 345
            E +LI QLDT+ LR IP    ++ ++GAPCG +T ++ + NGG SLR+++ ML         G+D       ED+Y+TR LR     +P++  A+ F  E+L         G+HGT KY+I
Sbjct:   98 ETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKVVFNGGLSLRKKAAMLRTC-----GGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDA---CGVHGTDKYYI 210
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BLAST of mRNA_P-wetherbeei_contig12921.1.1 vs. uniprot
Match: A0A559MFR6_9HELO (DUF5672 domain-containing protein n=1 Tax=Lachnellula willkommii TaxID=215461 RepID=A0A559MFR6_9HELO)

HSP 1 Score: 55.5 bits (132), Expect = 1.560e-6
Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 1 
Query:    4 HVLIGQLDTVILRPIPSL---YFKFAFVGAPCGLITGNQYILNGGFSLRRRSIMLEITTTHPGNGEDA--------EDIYFTRILRAKRFPIPTIQEAMAFCAETLVCNKVYGPVGIHGTTKY 339
            HVL+ Q D+++    P     + ++ FVGAP     G    +NGG SLRRR +MLE++  +   GE A        ED ++   L      +P+ +EA  F  ET+       PVG H   ++
Sbjct:  167 HVLLFQADSILCYNAPMRVEDFLQYDFVGAPIDGTIGQG--MNGGLSLRRRKLMLEVSLRYSWKGELANAENPVEFEDQWYWHKLLGMNARMPSQEEASKFSVETIWYET---PVGYHQVQRW 284
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BLAST of mRNA_P-wetherbeei_contig12921.1.1 vs. uniprot
Match: A0A8D9FSF0_9VIRU (DUF5672 domain-containing protein n=1 Tax=uncultured marine phage TaxID=707152 RepID=A0A8D9FSF0_9VIRU)

HSP 1 Score: 52.4 bits (124), Expect = 1.420e-5
Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 1 
Query:    1 EHVLIGQLDTVILRPIPSLYFKFAFVGAPCGLITGNQY---------IL----NGGFSLRRRSIMLEITTTHPG--NGEDA---EDIYFTRILRAKRFPIPTIQEAMAFCAETLVCNKVYGPVGIHGTTKYWIPSRQME 363
            E++LI Q D+ +LR     Y  + +VGAP        +         I     NGGFSLR++S ML I +   G  + ED    ED++F + ++      P++ +   FC ET+       P+ +H   +Y + + Q+E
Sbjct:   97 EYILIFQSDSFMLRDGLDEYLDYDYVGAPWNWANDPNFKDPRYKDLSIFKNGGNGGFSLRKKSSMLNIISKKYGEPSAEDKYVNEDMFFAKYIKE----YPSLDKCKEFCVETMYSEN---PLAVHAIDRY-LSNEQIE 227
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BLAST of mRNA_P-wetherbeei_contig12921.1.1 vs. uniprot
Match: A0A7D8URW9_9HELO (DUF5672 domain-containing protein n=1 Tax=Lachnellula cervina TaxID=1316786 RepID=A0A7D8URW9_9HELO)

HSP 1 Score: 51.2 bits (121), Expect = 5.010e-5
Identity = 39/127 (30.71%), Postives = 58/127 (45.67%), Query Frame = 1 
Query:    4 HVLIGQLDTVILRPIPSL---YFKFAFVGAPCGLITGNQYILNGGFSLRRRSIMLEITTTHPGNGEDA------------EDIYFTRILRAKRFPIPTIQEAMAFCAETLVCNKVYGPVGIHGTTKY 339
            HVL+ Q D+++    P     + ++ FVGAP     G+   +NGG SLRRR +MLEIT  +    E A            ED ++   L      +P  +EA  F  ET+       P+G H   ++
Sbjct:  180 HVLLFQADSILCYNAPMRVEDFLRYDFVGAPIDPTIGSG--MNGGLSLRRRQLMLEITLGYSWREELAKAENPQDPKVEFEDQWYWHKLHDMGARMPNREEASKFSVETIWYET---PLGYHQVQRW 301
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12921.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZA04_9STRA3.480e-1838.02DUF5672 domain-containing protein n=1 Tax=Tribonem... [more]
A0A559MFR6_9HELO1.560e-631.71DUF5672 domain-containing protein n=1 Tax=Lachnell... [more]
A0A8D9FSF0_9VIRU1.420e-528.78DUF5672 domain-containing protein n=1 Tax=uncultur... [more]
A0A7D8URW9_9HELO5.010e-530.71DUF5672 domain-containing protein n=1 Tax=Lachnell... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12921contigP-wetherbeei_contig12921:7..369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog430498.S8BMV8
Model size363
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.89e-08
EggNOG OGs28PGR@1|root,2SCDD@2759|Eukaryota,39KZT@33154|Opisthokonta,3Q5DH@4751|Fungi,3RNDB@4890|Ascomycota
Descriptionnegative regulation of septation initiation signaling
Cds size363
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185966.643104-CDS-P-wetherbeei_contig12921:6..3691683185966.643104-CDS-P-wetherbeei_contig12921:6..369Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12921 7..369 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12921.1.1prot_P-wetherbeei_contig12921.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12921 7..369 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12921.1.1

>prot_P-wetherbeei_contig12921.1.1 ID=prot_P-wetherbeei_contig12921.1.1|Name=mRNA_P-wetherbeei_contig12921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
EHVLIGQLDTVILRPIPSLYFKFAFVGAPCGLITGNQYILNGGFSLRRRS
IMLEITTTHPGNGEDAEDIYFTRILRAKRFPIPTIQEAMAFCAETLVCNK
VYGPVGIHGTTKYWIPSRQME
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mRNA from alignment at P-wetherbeei_contig12921:7..369+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12921.1.1 ID=mRNA_P-wetherbeei_contig12921.1.1|Name=mRNA_P-wetherbeei_contig12921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig12921:7..369+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCACGTCCTCATTGGGCAACTGGACACGGTCATCTTGCGGCCAATTCC
GTCTTTGTATTTCAAATTCGCCTTTGTGGGTGCTCCGTGCGGACTCATCA
CAGGAAATCAATACATTCTCAACGGTGGGTTCAGTCTACGACGTCGATCC
ATCATGCTTGAAATCACCACAACGCACCCTGGAAATGGAGAGGACGCGGA
AGACATTTACTTTACGCGGATCTTACGGGCAAAGCGATTCCCTATCCCAA
CAATTCAGGAAGCCATGGCCTTTTGTGCAGAGACCCTCGTGTGCAACAAG
GTCTATGGACCCGTAGGAATCCACGGGACGACAAAGTATTGGATACCATC
TCGCCAAATGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12921:7..369+

>mRNA_P-wetherbeei_contig12921.1.1 ID=mRNA_P-wetherbeei_contig12921.1.1|Name=mRNA_P-wetherbeei_contig12921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig12921:7..369+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCACGTCCTCATTGGGCAACTGGACACGGTCATCTTGCGGCCAATTCC
GTCTTTGTATTTCAAATTCGCCTTTGTGGGTGCTCCGTGCGGACTCATCA
CAGGAAATCAATACATTCTCAACGGTGGGTTCAGTCTACGACGTCGATCC
ATCATGCTTGAAATCACCACAACGCACCCTGGAAATGGAGAGGACGCGGA
AGACATTTACTTTACGCGGATCTTACGGGCAAAGCGATTCCCTATCCCAA
CAATTCAGGAAGCCATGGCCTTTTGTGCAGAGACCCTCGTGTGCAACAAG
GTCTATGGACCCGTAGGAATCCACGGGACGACAAAGTATTGGATACCATC
TCGCCAAATGGAG
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