mRNA_P-wetherbeei_contig1292.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A835ZBS5_9STRA (Glycine oxidase thio n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS5_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.160e-69 Identity = 160/339 (47.20%), Postives = 198/339 (58.41%), Query Frame = 1
Query: 4 AVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRG------IAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFMAPKEEREERQAAAGAVLAGTPKAGTFLRSAGSRAVAALTGAAKATAAAFEAAAQSGAGGGYAFEGLQSLFGPGGSGPLAPEEXXXXXXXXXXXXXXXAAPTAPTFTETISPAEMTATEESEF--VTDYEASEFFSEEELRRARQSNRNLDE 996
AVV A GAW+REL+PVPM +HKGQM++LR P G+ A+ RVLFAE AY+IPKRDGR+VVGATVE D+W LHTTP G +A+L+ A ++CPALA A+E+ WAGLRPV PD MPVLG S R NVF+AGGYWRNGV LAP+TGQLVADAV+ LSVAD + F+ DRF+ ++ ++ G + AGT + GA+K GG AF+GL +FG GG G + PE A A +T + A EESE VTDY+A FSEE L+ AR+SNRNLDE
Sbjct: 163 AVVGAMGAWMRELLPVPMTSHKGQMMALRSPS----------GLQKAIP--GRVLFAEDAYIIPKRDGRVVVGATVERDDWSLHTTPAGKGAATGLARLIANATKVCPALAHMAIEETWAGLRPVAPDSMPVLGASERCRNVFLAGGYWRNGVLLAPRTGQLVADAVMNELSVADRTVLGAFSSDRFLGARKGAAAERSLGGIAVG---FAGTVSK-----------GASK---------------GGMAFDGLYGMFGAGGRGYIPPELEHAEEEARGPGADAQQARDAADAQQT----QAEALEESEEGPVTDYDAMPEFSEEALKEARRSNRNLDE 456
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A6H5LEA9_9PHAE (DAO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 7.010e-69 Identity = 160/342 (46.78%), Postives = 201/342 (58.77%), Query Frame = 1
Query: 1 SAVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASA--RGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFM--------APKEEREERQAAAGAVLAGTPKAGTFLRSAGSRAVAALTGAAKATAAAFEAAAQSGAGGGYAFEGLQSLFGPGGSGPLAPEEXXXXXXXXXXXXXXXAAPTAPTFTETISPAEMTATEESEFVTDYEASEFFSEEELRRARQSNRNLDE 996
+AVV+ATGAW+REL+PVPM HKGQM++LR P GA A +GGG+G L+RV FAE Y+IPKRDGR+VVG+TVE E+G++ TP GI Q++ A ++CPALAD A+E WAGLRPVTPDC PVLG S R N+FVAGGYWRNGV LAPKT QLVADAV G LS DE+ + F+MDRF A ++++ Q AA GTF S+GSRA ++ A+ + E AA GA L+ +FG G + P E T + + E V DY ASE FSEE+L+ AR +NR L E
Sbjct: 260 NAVVSATGAWMRELMPVPMVPHKGQMMALREPAGGLGAGAPRQGGGIG-----LTRVFFAEGCYIIPKRDGRVVVGSTVEVGEYGIYNTPAGIKQIIDAAVKVCPALADLAIERTWAGLRPVTPDCFPVLGASPRCPNLFVAGGYWRNGVLLAPKTAQLVADAVCGLLSPQDESFLQEFSMDRFTKLGESAAAAARDDKPRAQPAAAVEPQRPAPTGTF-SSSGSRAEGFISEASPSEVLEMERAALEGANDASILSALEGMFGEG----MVPVEVEEDDASRDVPS------THASXXXXXXXXXXXXXKVQEPVNDYHASEQFSEEKLKEARMANRMLQE 585
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A4D9DFC1_9STRA (DAO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFC1_9STRA) HSP 1 Score: 189 bits (479), Expect = 4.640e-50 Identity = 110/215 (51.16%), Postives = 134/215 (62.33%), Query Frame = 1
Query: 7 VVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFMAPKEEREERQAA--AGAVLAGTPKAGTFLRSAGS 645
VV A GAW+ L+PVP+ KGQMLSLR R PL+RV+FAE Y+IPK DGR++VGATVE +W T +GI L + A ++CPAL LE+ WAGLRP TPD +PVL GS W+N+FVAGGYWRNGV LAP+TGQLVAD V G + D AL FA RF+ P E RQ + + A +A T G + RSAGS
Sbjct: 210 VVVANGAWMNRLLPVPVGPVKGQMLSLRPKRGEPN-------------PLTRVIFAENCYLIPKADGRLIVGATVEAGQWDRGVTAKGIHDLTQRALQICPALGSLELEETWAGLRPTTPDTLPVL-GSTPWENLFVAGGYWRNGVLLAPRTGQLVADCVEGKVGAEDAALLSHFAWSRFL-PSRVGEARQGSKKSAATVAATATVG-YQRSAGS 408
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: W7U8T7_9STRA (Glycine oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8T7_9STRA) HSP 1 Score: 185 bits (469), Expect = 6.440e-50 Identity = 100/191 (52.36%), Postives = 122/191 (63.87%), Query Frame = 1
Query: 7 VVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFMAPKEEREERQ 579
VV A GAW+ L+PVP+ KGQMLSLR + PL+RV+FAE Y+IPK DGR++VGATVE +W T +GI L + A ++CPAL + LE+ WAGLRP TPD +PVL GS W+N+FVAGGYWRNGV LAP+TGQLVAD V G + D AL FA RF+ P E RQ
Sbjct: 278 VVVANGAWMNRLLPVPVGPVKGQMLSLRPKKGEPN-------------PLTRVIFAENCYLIPKADGRLIVGATVEAGQWDRGVTAKGIHDLTQRALQICPALGNLELEETWAGLRPTTPDTLPVL-GSTPWENLFVAGGYWRNGVLLAPRTGQLVADCVEGKVGADDAALLSHFAWSRFL-PSRVGEARQ 453
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: B8C9B3_THAPS (DAO domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9B3_THAPS) HSP 1 Score: 177 bits (449), Expect = 2.790e-49 Identity = 86/163 (52.76%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 1 SAVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVV 489
+AV+ A G+W+R L+P P+ HKGQ LSLR+P A LSRVLFA+ Y++PK DGRI+VGATVEP ++ TP G+ + A RL P LAD +E+ WAGLRP TPD P+LG + +WDN+++AGGYWRNGV LAPKTGQLV D V+
Sbjct: 203 NAVIVANGSWMRHLLPTPVTPHKGQSLSLRMPN-------------NAPPLLSRVLFAQDTYIVPKADGRIIVGATVEPGQYDGDVTPSGMLHCMSEATRLIPGLADLPIEETWAGLRPTTPDKCPILGKTEQWDNIYLAGGYWRNGVLLAPKTGQLVGDLVI 352
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A7S0BWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWK6_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.460e-48 Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 1
Query: 1 SAVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFM 549
SAV+ A G+W+R+L+P+P+ AHKGQ S+R P+ +G L+RVLFA+ Y++PK DGRI+VGATVE ++ TPRG+ + A L PALAD +E+ W G+RP TPD +PVLG + W NVFVAGGYWRNGV LAPKTGQL++D V +++ D+ L FA +RFM
Sbjct: 95 SAVLVANGSWMRDLLPLPVVAHKGQSFSVRQPK--HGPPL-----------LNRVLFAQDTYIVPKADGRIIVGATVEVGDYSHDITPRGMMHCMNAAMELLPALADLPIEESWCGMRPTTPDKVPVLGATP-WGNVFVAGGYWRNGVLLAPKTGQLISDLVNQNVADKDQVLLDAFAWERFM 263
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A7S1YUL8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUL8_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.520e-47 Identity = 95/188 (50.53%), Postives = 120/188 (63.83%), Query Frame = 1
Query: 7 VVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFMAPKEERE 570
V+ A G+W+R+L+PVP+ HKGQ SLR+P T + LSRVLFA+ Y++PK DGRIVVGATVE + H TP G+ + A L P+L+ +E+ W GLRP TPD P+LG + W N+ +AGGYWRNGV LAPKTGQL+AD V G+LS DE L FA DRF PK +E
Sbjct: 126 VIVANGSWMRDLLPVPITPHKGQSFSLRMPP------------NTPPI-LSRVLFAQDTYIVPKADGRIVVGATVEAGTFDKHVTPAGLMHCISNALHLVPSLSTLPIEETWVGLRPTTPDKGPILGRTP-WSNLHIAGGYWRNGVLLAPKTGQLLADLVTGTLSEEDETLLDAFAWDRFTDPKRGKE 299
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A7S2KNW5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KNW5_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.120e-47 Identity = 93/188 (49.47%), Postives = 120/188 (63.83%), Query Frame = 1
Query: 7 VVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLVADAVVGS-----LSVADEALARPFAMDRFMAP 555
+V A G+W+R L+P+P+ HKGQ SLR+ + LSRVLFA+ Y++PK DGRI+VGATVEP + TP G+ + A RL PALAD +E+ WAGLRP TPD P+LGG+ +WDNV++AGGYWRNGV LAPKTGQLV D +V L D+AL + F+ +RF P
Sbjct: 121 LVVANGSWMRHLLPLPVTPHKGQSFSLRMD-------------ANSPPILSRVLFAQDTYIVPKADGRIIVGATVEPGTYDGSITPSGMLHCMSEATRLVPALADLPIEEQWAGLRPTTPDKCPLLGGTEQWDNVYLAGGYWRNGVLLAPKTGQLVGDLIVNDGKADRLPPNDQALLQAFSWERFTTP 295
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: A0A7S1XRU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRU6_9STRA) HSP 1 Score: 166 bits (421), Expect = 6.490e-46 Identity = 89/183 (48.63%), Postives = 119/183 (65.03%), Query Frame = 1
Query: 16 ATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDE-WGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRR---WDNVFVAGGYWRNGVALAPKTGQLVADAVVGSLSVADEALARPFAMDRFMA 552
A+GAW+REL+PVPM KGQM++LR P + T+ LSRVLF + YV+PK DGRI+VGATVEP+ + TP+G+A L AR+ P L ++ +++ WAGLRP TPD +PVLG + ++NV+ AGGYWRNG+ L P QLV D + G+LS D L R F+ DRF+A
Sbjct: 1 ASGAWMRELLPVPMQPIKGQMMALRPPAGS-----------TSAQRLSRVLFGDGIYVVPKVDGRIIVGATVEPEAGFDRRVTPKGLAYLCGKLARVAPELTEYTVDETWAGLRPTTPDFLPVLGRASAQGMYENVYFAGGYWRNGMLLPPVASQLVVDQMAGTLSAEDAELLRHFSYDRFLA 172
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Match: K0SQG9_THAOC (DAO domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQG9_THAOC) HSP 1 Score: 172 bits (436), Expect = 2.560e-44 Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 4 AVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLPLSRVLFAECAYVIPKRDGRIVVGATVEPDEWGLHTTPRGIAQLVKGAARLCPALADFALEDIWAGLRPVTPDCMPVLGGSRRWDNVFVAGGYWRNGVALAPKTGQLV 474
AVV A G+W+RE++P+P+ HKGQ SLR+P GG G +L SRVLFA+ Y++PK DGRI+VGATVEP + TP G+ + A RL P LA+ +E+ WAGLRP TPD PVLG + ++DNV++AGGYWRNGV LAPKTGQLV
Sbjct: 293 AVVVANGSWMREILPLPVTPHKGQSFSLRMPE---------GGGGAPML--SRVLFAQDTYIVPKADGRIIVGATVEPGRYDGDVTPEGLLHCLSEATRLVPGLAELPIEETWAGLRPTTPDKCPVLGRTEQFDNVYLAGGYWRNGVLLAPKTGQLV 438 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1292.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1292.1.1 >prot_P-wetherbeei_contig1292.1.1 ID=prot_P-wetherbeei_contig1292.1.1|Name=mRNA_P-wetherbeei_contig1292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=332bp SAVVAATGAWLRELVPVPMAAHKGQMLSLRVPRAAYGASARGGGVGTAVLback to top mRNA from alignment at P-wetherbeei_contig1292:2..1303+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1292.1.1 ID=mRNA_P-wetherbeei_contig1292.1.1|Name=mRNA_P-wetherbeei_contig1292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1302bp|location=Sequence derived from alignment at P-wetherbeei_contig1292:2..1303+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1292:2..1303+ >mRNA_P-wetherbeei_contig1292.1.1 ID=mRNA_P-wetherbeei_contig1292.1.1|Name=mRNA_P-wetherbeei_contig1292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=996bp|location=Sequence derived from alignment at P-wetherbeei_contig1292:2..1303+ (Phaeothamnion wetherbeei SAG_119_79)back to top |