mRNA_P-wetherbeei_contig1291.2.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI) HSP 1 Score: 221 bits (562), Expect = 9.150e-64 Identity = 113/199 (56.78%), Postives = 146/199 (73.37%), Query Frame = 1
Query: 370 EPEEMCFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
E +E+ FS RLDNAKS+TT+LSCLS+GT+KDQ A+CEV+ + +T VV+ RA TQA G L +++FQ YDC G FGINL TLLECLQ+FGP LAQTS+SM+Y FRLTLEE GVFTSCEIRT+H+D+E +++ LA+A+ + E +++SE LKE FQELAD GA+ V+ Q+AP QLS GS G+
Sbjct: 108 ESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAK-FGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGS 305
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.910e-58 Identity = 110/205 (53.66%), Postives = 144/205 (70.24%), Query Frame = 1
Query: 355 AAATGEPEEM-CFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
A A E EE FS R+DNA++VTT+LSCLS+G++K QHA+CE + +GLTFV+T +A TQA G L +FQAY+CE FGINL LLECLQ+FG M A S +++Y+P F++TLEE GVFTSCE+RTL E+ + ++A LA A+R EE ++RSE LKE FQELAD PGA+ + F SQ AP +LS +GS G+
Sbjct: 24 AEAEREAEEKDLFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFG--MNASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGS 226
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.070e-55 Identity = 104/199 (52.26%), Postives = 137/199 (68.84%), Query Frame = 1
Query: 370 EPEEMCFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
E +E+ FS RLDNA+S+TT+LSCLS+GT+KDQ A+CEV+ + +T VV+ RA TQA G L +++FQ YDC G FGINL TLLECLQ+FG LAQTS+SM+Y FRLTLE GVFTSCEIRT+H+D+E ++ LA+A+ + E +++ E FQELAD GA+ V+ Q+A QL GS G+
Sbjct: 29 ESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAK-FGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKGE----AFQELADLNGATSVSVTFGQEATHLQLYAKGSNGS 222
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A6H5JQZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 6.540e-47 Identity = 103/220 (46.82%), Postives = 139/220 (63.18%), Query Frame = 1
Query: 370 EPEEMCFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSY-------HPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGTRCAIRANPGRSSSP 1008
E +E+ FS RLDNA+S+TT+LSCLS+GT+KDQ A+CEV+ + +T VV+ RA TQA G L +++FQ YDC G FGINL TLLECLQ+FGP LAQTS+SM+Y HP G GV E++ + E +++ LA+A+ + E +++SE LKE FQELAD GA+ V+ Q+A QLS GS G+R A+ A P +P
Sbjct: 29 ESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAK-FGINLTTLLECLQIFGPGSLAQTSVSMAYQESDVPPHPGRG--------RGVH---ELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAM-APPSSHGAP 235
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.030e-45 Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 376 EEMCFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMG 963
EE FS R+D+ K +T L+CLS+G++KDQ A+ EV+ +G+ F+VT RA TQ+ G A+FQA+ C+P F I+L LLECLQVFG + L T L+MSY P + RLTLEE GV T+CE+R L ++ D A LA A+R E +++S+ LKE EL+D PGA V +V+ P F L+ G G
Sbjct: 14 EEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICG 209
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A7S2WVI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.810e-35 Identity = 78/196 (39.80%), Postives = 126/196 (64.29%), Query Frame = 1
Query: 388 FSARLDNAKSVTTLLSCLSNGTKKDQH-ARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDC-EPGVHHFGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGAD-YAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
FS RL++AK + L+SCL++ K+ +H A C+V+ GL F + RA + Q SG L +F +++C E G F +NL +L+CL +FGP+ ++ T+++M+Y + +F+LT+EE GVFT C+I+TL + D ++ L ++R+ E ++++SE+LKE EL D GAS V +S AP FQL+ G++GT
Sbjct: 20 FSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGA--FCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDEDEFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGT 213
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.250e-29 Identity = 69/187 (36.90%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 418 VTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLAQTS--LSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDE---GADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMG 963
+ ++L C+ NGT+KDQHA+C+V G++F + SR+ +TQ +G + F ++C F IN+ TLL+CL +FGP S ++MS+ L L+E GVFT C+I+ + D + GA +A + +RQ +++SE LKE EL D A+R++ +S +AP FQ+S GS+G
Sbjct: 1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLG 187
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: F0XY36_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY36_AURAN) HSP 1 Score: 92.4 bits (228), Expect = 3.930e-16 Identity = 67/205 (32.68%), Postives = 106/205 (51.71%), Query Frame = 1
Query: 385 CFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDC--EPGVHH----------FGINLITLLECLQVFGPSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMG 963
CFSARLD+A VT+L+ CL + + A + GL V R+ ST A+ L + F A+DC E G F +++ L+ECL++FG + A +S+SY P +F+LTLEE G FTSC++ L + ++ +A A+R + S L++ +ADF S V + + + F+L+ +GS+G
Sbjct: 3 CFSARLDSAALVTSLIECLIEEKRSEVVAHIAIDAAGLELHVVGRSKSTHATLTLPVSCFAAFDCVDETGAPFVRGGDQEPIAFSVDVRALVECLKLFGAAG-ADLEVSLSYAPATEVFKLTLEEPGAFTSCDVHVLEDSNDLEGATDMAGAFRDAPTAAKTLATSATLRDV---VADFD-ESAVGSSTIKVSVHFRLAASGSVG 202
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A2I4BAI1_9TELE (cell cycle checkpoint protein RAD1 n=14 Tax=Aplocheiloidei TaxID=45443 RepID=A0A2I4BAI1_9TELE) HSP 1 Score: 83.6 bits (205), Expect = 2.670e-14 Identity = 67/202 (33.17%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 367 GEPEEMCFSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHHFGINLITLLECLQVFGPSMLA--QTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
GE E+ A LDNA++++ LL +S KD HA V+ +GL V QA+ ++A +FQ + + + F +NL LL+CL +FG S++A T+L M Y L LEE GV T C+I T E +E D+ + ++++SE LKE F +L ++T + +Q P+F+LS G+ G+
Sbjct: 9 GEDEQYVLVATLDNARNLSNLLKAISF---KD-HAIFTVTPNGLKVTVED-CKCVQANAFIQADIFQEFTIKEDLIAFQVNLTVLLDCLNIFGGSIVAGISTALRMCYRGYGYPLTLFLEEGGVVTVCKINT-EEPEEPIDFDFCSSNVT-----NKVILQSESLKEAFSDLDMTSEVLQITMSPNQ--PYFRLSTFGNSGS 197
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Match: A0A1Y1ZDX0_9FUNG (Cell cycle checkpoint protein RAD1 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZDX0_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 4.330e-13 Identity = 62/221 (28.05%), Postives = 108/221 (48.87%), Query Frame = 1
Query: 388 FSARLDNAKSVTTLLSCLSNGTKKDQHARCEVSMDGLTFVVTSRAMSTQASGELRAAMFQAYDCEPGVHH--------FGINLITLLECLQVFG--------------------PSMLAQTSLSMSYHPLEGIFRLTLEEAGVFTSCEIRTLHEDDEGADYAMLAQAYRQHDEEGAIVMRSEYLKEPFQELADFPGASRVTFAVSQKAPFFQLSVAGSMGT 966
F +RL N +S+ LL + + + A C ++ +GL F V + QA L++++FQ Y + + FG+ L TL+ECL +FG P +QT+L MSY LTLE+ GV T C++ T ++ +L+ ++++ I+M+SE+L++ EL D + ++TF +S + P+F++S G G+
Sbjct: 16 FRSRLQNVRSLVVLLRAI----QFKERAVCTITPNGLKFSV-EESRCVQAHAYLQSSLFQEYQFDAPISSINSQENIVFGVQLNTLIECLNIFGTANLNQLGNTVTTNGTASTMPVFKSQTALVMSYEGYGANLVLTLEDNGVITVCKLSTFEPEN------LLSFNFQEYSITQKIIMKSEWLRDALSEL-DI-SSEKITFLISPQPPYFRMSTIGISGS 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1291.2.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1291.2.3 >prot_P-wetherbeei_contig1291.2.3 ID=prot_P-wetherbeei_contig1291.2.3|Name=mRNA_P-wetherbeei_contig1291.2.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp MEDDGVDQQARKEEADDGGEGNGGEAAATGEPEEMCFSARLDNAKSVTTLback to top mRNA from alignment at P-wetherbeei_contig1291:5327..7129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1291.2.3 ID=mRNA_P-wetherbeei_contig1291.2.3|Name=mRNA_P-wetherbeei_contig1291.2.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1803bp|location=Sequence derived from alignment at P-wetherbeei_contig1291:5327..7129- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1291:5327..7129- >mRNA_P-wetherbeei_contig1291.2.3 ID=mRNA_P-wetherbeei_contig1291.2.3|Name=mRNA_P-wetherbeei_contig1291.2.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig1291:5327..7129- (Phaeothamnion wetherbeei SAG_119_79)back to top |