mRNA_P-wetherbeei_contig12903.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12903.1.1
Unique NamemRNA_P-wetherbeei_contig12903.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 3.760e-180
Identity = 261/314 (83.12%), Postives = 288/314 (91.72%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L V+D+KLGG IK+KLEIKC+ND+  MELMRGIR QL+ LL+G  VGE  ++AMRLGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKE+NTYAMRVREW+GWHFPEMAKILNDNMHYAKCVLRMGTRD CR HDFSDI+GD+A+E  LKE AE+SMGTEITE D+ SI ALAEQVVALSEYR QLY+YLKNRM AIAPNLTI+VGELVGARLI+HAGSLLNLAKHPAST+QILGAEKALFRALKTK DTPKYGLIYHASLIGQT  KNKGK+SRVLAAKT+LA+RVDAMGETTDTT+G+ESRAKV  R R
Sbjct:   88 KLAVADSKLGGVIKDKLEIKCINDSGVMELMRGIRLQLDGLLVG--VGEQNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPEMAKILNDNMHYAKCVLRMGTRDRCRAHDFSDIIGDDAIEHTLKENAEISMGTEITEMDLKSISALAEQVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKVEARIR 399          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA)

HSP 1 Score: 467 bits (1202), Expect = 2.730e-161
Identity = 235/314 (74.84%), Postives = 273/314 (86.94%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            Q+ V D+KLGG +K+KL+I+CVND+  MELMRG+R Q+E LL   GV E  +RA RLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKE+NTYAMRV+EW+GWHFPEMAK++ DN+ Y++C+L MGTRDH +  DFS +L D++VE ALK +AEVSMGTEI + DV SIKALA+QVV+LSEYR QLY+YLKNRM AIAPNLTI+VGELVGARL++HAGSLLNLAKHPAST+QILGAEKALFRALKTK DTPKYGLIYHASLIGQT  KNKGKISRVLAAK +L IR+DA+GE +DT++G E R KV  R R
Sbjct:   33 QMAVIDSKLGGLVKDKLDIQCVNDSKVMELMRGVRQQMETLL--SGVSEHDMRATRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKVVGDNLQYSRCILLMGTRDHAKSTDFSSVLEDDSVEKALKASAEVSMGTEINDIDVASIKALADQVVSLSEYRVQLYDYLKNRMQAIAPNLTILVGELVGARLLAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTSNKNKGKISRVLAAKCALGIRMDALGEVSDTSVGFEGRQKVEMRIR 344          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 468 bits (1204), Expect = 1.930e-160
Identity = 246/314 (78.34%), Postives = 274/314 (87.26%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L VSD+KL  AIK+KL IKCVND+  MELMRGIR QL+ LL    VG+D ++AMRLGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKE+NTYAMRV+EWFGWHFPEMAKI+NDNM YAK V+RMG R  C++ DFSDI+ DE +   LKEAAEVSMGTEIT  D+VSIK+LA+QVVALSEYR QL EYL++RM AIAPNLTIMVGELVGARLI+HAGSL+NLAK PASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQ   KNKGKISRVLAAK +LAIRVDA+ + TDTTIGIESR+KV  R R
Sbjct:   88 KLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTS--VGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLR 399          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A812NHD2_SYMMI (NOP5-2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHD2_SYMMI)

HSP 1 Score: 458 bits (1179), Expect = 2.900e-157
Identity = 232/314 (73.89%), Postives = 273/314 (86.94%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L V+D KLGG +KEK++I+CV+    ME+ RGIR+Q++ LL G  V + A+R+M+LGLSHSLSRYKLKFSADKVD M+VQAIGLLD+LDKE+NTYAMRVREW+GWHFPEMA+IL+DNM YAK VLRMG R  C+ +DFSDILGDE +E  LK+ AE SMGTEI+E D+ +IKAL EQV++LSEYR QL++YLKNRM AIAPNLT+MVGELVGARL++HAGSLLNLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  KNKGKISRVLAAKT+LAIRVDA+G+++  TI +ESR KV  R R
Sbjct:   87 ELAVADTKLGGLLKEKMDIQCVHSDKVMEIFRGIRSQMDTLLAG--VEDGALRSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINTYAMRVREWYGWHFPEMARILSDNMFYAKIVLRMGMRTECKKYDFSDILGDETLEETLKKTAETSMGTEISESDLTNIKALCEQVISLSEYRIQLFDYLKNRMAAIAPNLTMMVGELVGARLVAHAGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKISRVLAAKTALAIRVDALGDSSGPTIAVESRLKVEARIR 398          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: K3WSU8_GLOUD (Nop domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU8_GLOUD)

HSP 1 Score: 448 bits (1153), Expect = 1.650e-153
Identity = 226/314 (71.97%), Postives = 273/314 (86.94%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L VSD  LGG IKEK+ I+CV+D A  E+MRGIR  + +L+   G+ ++ +++M LGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKE+NTYAMRVREWFGWHFPEM KI+ DN+ YAKCVL+MG R + ++ DFSDIL ++ VEA+++E  EVSMGT+I+E DV +I +L EQV++L+EYRAQL++YLKNRMNAIAPNLT+MVGELVGARLI+HAGSL+NLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  K+KGKISRVLAAKT+LA+RVDA+G+ T+ TIG ++RAKV  R R
Sbjct:   88 KLAVSDKALGGLIKEKMGIQCVHDTAVNEVMRGIRANMNSLI--SGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGVRSNVKNLDFSDILSED-VEASMREVCEVSMGTDISEEDVTNISSLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVR 398          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: M4C0Z6_HYAAE (Nop domain-containing protein n=29 Tax=Peronosporaceae TaxID=4777 RepID=M4C0Z6_HYAAE)

HSP 1 Score: 447 bits (1150), Expect = 3.050e-153
Identity = 226/314 (71.97%), Postives = 269/314 (85.67%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L VSD  LG  IKEKL I CVND+A  E+MRGIR  +  L+ G  + +D ++AM LGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKE+NTY+MRVREWFGWHFPEM KI+ DN+ YAKCVL+MG R   +  DFSD+L ++ VEA+++E  EVSMGT+I++ D+ +I AL EQV++L+EYRAQL++YLKNRMNAIAPNLT+MVGELVGARLI+HAGSL+NLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  K+KGKISRVLAAKT+LA+RVDA+G+ T+ TIG ++RAKV  R R
Sbjct:   88 KLAVSDKALGALIKEKLSIACVNDSAVNEIMRGIRANMNTLITG--LKDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKSLDFSDVLSED-VEASMREVCEVSMGTDISQEDLTNISALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMR 398          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A7S3H4B7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4B7_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 3.860e-152
Identity = 226/314 (71.97%), Postives = 271/314 (86.31%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L V+D KLGG IKEKL+I+CV + + MEL RG+RTQ+++L+     G   +++M+LGLSHSLSRYKLKFSADKVD M+VQAIGLLD+LDKE+N YAMRVREW+GWHFPEMAKILNDNM YA+CVLRMG R + ++ DFSDIL DEAVE+ LK+ AE SMGTEI++ D+++IK+L +QVV+LSEYR QL+EYLKNRM AIAPNLT+MVGELVGARLI+H+GSLLNL+KHPAST+QILGAEKALFRALKTKTDTPKYGLIYHASLIGQ   KNKGKISRVLAAKT+LAIRVDA+G+    TI  +++ KV  R R
Sbjct:   85 ELAVADIKLGGLIKEKLDIQCVYNDSIMELFRGVRTQMDSLMGNSEAG--GLKSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINIYAMRVREWYGWHFPEMAKILNDNMFYARCVLRMGMRINAKNCDFSDILADEAVESILKKTAETSMGTEISDSDLLNIKSLCDQVVSLSEYRTQLFEYLKNRMAAIAPNLTMMVGELVGARLIAHSGSLLNLSKHPASTIQILGAEKALFRALKTKTDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKTALAIRVDALGDNDGPTIAFDNKLKVEARIR 396          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A7S1U4X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4X5_9STRA)

HSP 1 Score: 443 bits (1140), Expect = 8.780e-152
Identity = 228/314 (72.61%), Postives = 268/314 (85.35%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L V DAKLGG IKEKL I+CV +A   EL+RGIR+Q++AL+    V E  +R M+LGLSH LSRYKLKFS DKVDTM+VQA+GLLD+LDKE+NTYAMR +EW+GWHFPEM K++ND + Y++CV +MG R +C   DFSDIL D +VEA LK+AA  SMGTEI+EGD+ +I+AL +QVV LSEYR QL+EYLKNRM+AIAPNLT+MVGELVGARLI+H+GSLLNLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  K+KGKISRVLAAK++LAIRVDA+GET   TIGIE+RAKV  R R
Sbjct:   99 ELAVIDAKLGGLIKEKLGIECVANAGINELIRGIRSQMDALI--PAVDESIMRTMQLGLSHQLSRYKLKFSPDKVDTMIVQAVGLLDDLDKEINTYAMRAQEWYGWHFPEMKKVINDTIQYSRCVRKMGMRTNCAATDFSDILEDTSVEALLKDAAMTSMGTEISEGDLNNIQALCDQVVNLSEYRVQLFEYLKNRMHAIAPNLTVMVGELVGARLIAHSGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKSALAIRVDALGETEGPTIGIEARAKVEARIR 410          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A8K1CTM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTM6_PYTOL)

HSP 1 Score: 443 bits (1140), Expect = 1.540e-151
Identity = 223/314 (71.02%), Postives = 271/314 (86.31%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L VSD  LGG IKEKL I+C++D A  E+MRG+R  + +L+   G+ ++ +++M LGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKE+NTY+MRVREWFGWHFPEM KI+ DN+ YAKCVL+MG R   ++ DFSDIL ++ VEA+++E  EVSMGT+I+E DV +I +L EQV++L+EYRAQL++YLKNRMNAIAPNLT+MVGELVGARLI+HAGSL+NLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  K KGKISRVLAAKT+LA+RVDA+G+ T+ +IG ++RAKV  R R
Sbjct:   88 KLAVSDKALGGIIKEKLGIQCIHDTAVNEIMRGVRANMNSLI--SGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKNLDFSDILSED-VEASMREVCEVSMGTDISEEDVTNIASLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKYKGKISRVLAAKTALAVRVDALGDATEASIGYDNRAKVEARVR 398          
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Match: A0A024FV65_9STRA (Nop domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FV65_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 3.720e-151
Identity = 228/314 (72.61%), Postives = 268/314 (85.35%), Query Frame = 1
Query:    7 QLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGEDAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMRVREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVEAALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNAIAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDTTIGIESRAKVRQRAR 948
            +L VSD  LG  IKEKL I CV DA   ELMRGIRT + +L+ G  + ++ +++M LGLSHSLSRYKLKFSADKVDTM++QAIGLLDELDKE+NTY+MRVREWFGWHFPEM KI+ DN+ YAK VL+MG R   ++ DFSDIL  E+VEAAL++  E+SMGT+I+E DVV+I+AL +QV++L+EYR+QL++YLKNRMNAIAPNLT+MVGELVGARLISHAGSL+NLAKHPASTVQILGAEKALFRALKTK DTPKYGLIYHASLIGQT  K KGKISRVLAAKTSLAIRVDA+GE  +  IG ++RAKV  R R
Sbjct:   87 KLAVSDKALGSIIKEKLGIPCVYDACVFELMRGIRTHMNSLIAG--LEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIITDNLQYAKTVLKMGIRSEIKNLDFSDILS-ESVEAALRDVCEISMGTDISEEDVVNIRALCDQVISLTEYRSQLFDYLKNRMNAIAPNLTVMVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKFKGKISRVLAAKTSLAIRVDALGEGVEACIGFDNRAKVEARIR 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12903.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZD1_9STRA3.760e-18083.12Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2UY01_9STRA2.730e-16174.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FXU6_ECTSI1.930e-16078.34Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A812NHD2_SYMMI2.900e-15773.89NOP5-2 protein n=1 Tax=Symbiodinium microadriaticu... [more]
K3WSU8_GLOUD1.650e-15371.97Nop domain-containing protein n=2 Tax=Pythiaceae T... [more]
M4C0Z6_HYAAE3.050e-15371.97Nop domain-containing protein n=29 Tax=Peronospora... [more]
A0A7S3H4B7_9STRA3.860e-15271.97Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1U4X5_9STRA8.780e-15272.61Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8K1CTM6_PYTOL1.540e-15171.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024FV65_9STRA3.720e-15172.61Nop domain-containing protein n=1 Tax=Albugo candi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12903contigP-wetherbeei_contig12903:96..1906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXU6
Preferred nameNOP58
PFAMsNOP5NT,Nop
Model size951
Max annot lvl2759|Eukaryota
KEGG koko:K14565
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016049,GO:0016070,GO:0016072,GO:0016604,GO:0019899,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033036,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0048254,GO:0051117,GO:0051179,GO:0070013,GO:0070761,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Exons4
Evalue3.04e-161
EggNOG OGsCOG1498@1|root,KOG2572@2759|Eukaryota
Ec32 ortholog descriptionNOP58 subunit of the C/D ribonucleoprotein complex
Ec32 orthologEc-23_001460.1
Descriptionendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cds size948
COG categoryJ
BRITEko00000,ko00001,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185965.9407227-CDS-P-wetherbeei_contig12903:95..3351683185965.9407227-CDS-P-wetherbeei_contig12903:95..335Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12903 96..335 -
1683185965.949689-CDS-P-wetherbeei_contig12903:596..7671683185965.949689-CDS-P-wetherbeei_contig12903:596..767Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12903 597..767 -
1683185965.9567637-CDS-P-wetherbeei_contig12903:1056..13141683185965.9567637-CDS-P-wetherbeei_contig12903:1056..1314Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12903 1057..1314 -
1683185965.963832-CDS-P-wetherbeei_contig12903:1624..19031683185965.963832-CDS-P-wetherbeei_contig12903:1624..1903Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12903 1625..1903 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185965.9709334-UTR-P-wetherbeei_contig12903:1903..19061683185965.9709334-UTR-P-wetherbeei_contig12903:1903..1906Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12903 1904..1906 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12903.1.1prot_P-wetherbeei_contig12903.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12903 96..1903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12903.1.1

>prot_P-wetherbeei_contig12903.1.1 ID=prot_P-wetherbeei_contig12903.1.1|Name=mRNA_P-wetherbeei_contig12903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=316bp
MQLCVSDAKLGGAIKEKLEIKCVNDAATMELMRGIRTQLEALLLGDGVGE
DAVRAMRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEVNTYAMR
VREWFGWHFPEMAKILNDNMHYAKCVLRMGTRDHCRDHDFSDILGDEAVE
AALKEAAEVSMGTEITEGDVVSIKALAEQVVALSEYRAQLYEYLKNRMNA
IAPNLTIMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKT
KTDTPKYGLIYHASLIGQTGAKNKGKISRVLAAKTSLAIRVDAMGETTDT
TIGIESRAKVRQRARK
back to top

mRNA from alignment at P-wetherbeei_contig12903:96..1906-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12903.1.1 ID=mRNA_P-wetherbeei_contig12903.1.1|Name=mRNA_P-wetherbeei_contig12903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1811bp|location=Sequence derived from alignment at P-wetherbeei_contig12903:96..1906- (Phaeothamnion wetherbeei SAG_119_79)
GGCATGCAGCTCTGCGTGTCGGACGCGAAACTGGGCGGCGCCATCAAGGA GAAGCTGGAGATAAAGTGTGTCAATGACGCAGCGACCATGGAGCTGATGC GCGGCATTCGCACGCAGCTCGAGGCGCTGCTGCTGGGCGACGGCGTCGGC GAAGACGCCGTGCGCGCCATGCGGCTGGGGCTGAGCCACTCGCTGTCGCG CTACAAACTGAAGTTCTCGGCCGACAAGGTGGACACCATGGTGGTACAGG CCATCGGCCTCCTTGACGAGCTCGACAAGGAGGTAAGCAGCTGACTTTTC TGTCCAGTCCCATCTGCGGACAGTCGGCTTGGCAGCTCTTAGCTCCTTTC TTTATTGGGGCCAGTGTGAATGCGGCATTGGTTGCGGCGAAGGCAGGCAA GGATGCATTCCTTCTCCCGGAGGACGCTAAGTATTTTTTCTGCGATCGCA GACTAACCTTGCCTCGTTGTTCTGTACCACAAAGCCTGGCTTCTCTTATC TTTCCCCGTCACCTTTCTCCTTCGTCTCCTCAATGGCAACGTGCCGGTCT CGTCCAAACCATCCAACCAAACGAACGGAACTGCGCCACCAGGTGAACAC GTACGCGATGCGGGTGCGCGAGTGGTTCGGCTGGCACTTCCCCGAGATGG CCAAGATTCTCAACGACAACATGCATTACGCCAAGTGCGTCTTGCGCATG GGCACCCGGGACCACTGCCGGGACCACGACTTCTCGGACATCCTCGGGGA CGAGGCGGTGGAGGCCGCCCTCAAGGAGGCGGCTGAGGTGTCCATGGGCA CGGAGATCACCGAGGGGGACGTCGTCTCCATCAAGGCCCTGGCGGAGCAG GTGAGGGCGAAGTCTAGGCGGAAATGTGGGGAGGGACGGCGGGCGTACCT TTTCTCTTTCTTTCTCGCTGTTGGCGCTGAAGTCTCGCCGGCGGGCGCCG TCTCGCCGTAACTTCTCTGCCGGTTCGTGGTGTGGCGACCTGCATTCTTC CCACTTTTTCTCTCTGGTGTATCGTAGACGATGGCCTCGCCGCCGCCACC GCCGCAGCCGCCGCTGCAAACCCCAATATCACTTTTGCCTGCTGTCCTTC TGCGATTGCCACCTGCGATGGCATTATTAATGATTTCAGGTGGTGGCGCT TAGCGAGTACCGCGCGCAGCTGTACGAGTACCTCAAGAACCGCATGAACG CCATCGCCCCCAACCTCACCATCATGGTGGGGGAACTCGTCGGCGCCCGC CTCATCTCCCACGCCGGATCCCTCCTCAACCTCGCCAAGCACCCGGCCTC CACCGTCCAGGTCAGTCCGTCAGTCTGTTGGCAGGCGGCTTGCAGCTTCA ATTTTTGGCCGCTTCCTCTCTGTCGGTTGCAGCAGATTCAGAATTCACTT TTTTTGGTTTTCTTTCAGTTAAAGCAGAGTTGAAGACTCAAGAGAGGATG AATCACTGACCGAGCCGTGTTTGCCCCTCCTTGTCTGGCTTCATTCCCAC ACTCTACCGCCGTTTGCCCGCCTGTATACCCTGCCCCCCGCCTCGCTTCA TCTTCTTTCTCTGACCATCAGATCCTGGGCGCGGAGAAGGCGCTGTTTCG GGCGCTCAAGACCAAGACGGACACGCCCAAGTACGGGCTCATATACCACG CCAGCCTTATCGGCCAAACGGGGGCCAAGAACAAGGGCAAGATCTCGCGA GTGCTGGCGGCCAAGACGAGCCTTGCTATCCGCGTGGACGCCATGGGAGA GACCACCGACACCACCATCGGCATCGAGAGCCGCGCCAAGGTAAGACAGA GAGCGAGGAAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12903:96..1906-

>mRNA_P-wetherbeei_contig12903.1.1 ID=mRNA_P-wetherbeei_contig12903.1.1|Name=mRNA_P-wetherbeei_contig12903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig12903:96..1906- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCTCTGCGTGTCGGACGCGAAACTGGGCGGCGCCATCAAGGAGAA
GCTGGAGATAAAGTGTGTCAATGACGCAGCGACCATGGAGCTGATGCGCG
GCATTCGCACGCAGCTCGAGGCGCTGCTGCTGGGCGACGGCGTCGGCGAA
GACGCCGTGCGCGCCATGCGGCTGGGGCTGAGCCACTCGCTGTCGCGCTA
CAAACTGAAGTTCTCGGCCGACAAGGTGGACACCATGGTGGTACAGGCCA
TCGGCCTCCTTGACGAGCTCGACAAGGAGGTGAACACGTACGCGATGCGG
GTGCGCGAGTGGTTCGGCTGGCACTTCCCCGAGATGGCCAAGATTCTCAA
CGACAACATGCATTACGCCAAGTGCGTCTTGCGCATGGGCACCCGGGACC
ACTGCCGGGACCACGACTTCTCGGACATCCTCGGGGACGAGGCGGTGGAG
GCCGCCCTCAAGGAGGCGGCTGAGGTGTCCATGGGCACGGAGATCACCGA
GGGGGACGTCGTCTCCATCAAGGCCCTGGCGGAGCAGGTGGTGGCGCTTA
GCGAGTACCGCGCGCAGCTGTACGAGTACCTCAAGAACCGCATGAACGCC
ATCGCCCCCAACCTCACCATCATGGTGGGGGAACTCGTCGGCGCCCGCCT
CATCTCCCACGCCGGATCCCTCCTCAACCTCGCCAAGCACCCGGCCTCCA
CCGTCCAGATCCTGGGCGCGGAGAAGGCGCTGTTTCGGGCGCTCAAGACC
AAGACGGACACGCCCAAGTACGGGCTCATATACCACGCCAGCCTTATCGG
CCAAACGGGGGCCAAGAACAAGGGCAAGATCTCGCGAGTGCTGGCGGCCA
AGACGAGCCTTGCTATCCGCGTGGACGCCATGGGAGAGACCACCGACACC
ACCATCGGCATCGAGAGCCGCGCCAAGGTAAGACAGAGAGCGAGGAAG
back to top