mRNA_P-wetherbeei_contig12890.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: D8LBI0_ECTSI (Phosphoribulokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI0_ECTSI) HSP 1 Score: 389 bits (998), Expect = 1.440e-132 Identity = 189/224 (84.38%), Postives = 205/224 (91.52%), Query Frame = 1 Query: 1 PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 PG++S RL+A SMKLG DEKVVL+GVAADSGCGKSTFMRRLT+IFGG +VGPLGGGF GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSGRTALHT EQ+FDLMYE L LK GK+VMKPIYNHVNGTLDTPEEIK TPIVI+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDMMERGHSLESI+ASIEARKPDFDAFIAPQR++ADVV+QV Sbjct: 59 PGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQV 282
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: Q9ATC3_VAULI (Phosphoribulokinase n=3 Tax=Eukaryota TaxID=2759 RepID=Q9ATC3_VAULI) HSP 1 Score: 377 bits (969), Expect = 1.350e-128 Identity = 187/215 (86.98%), Postives = 198/215 (92.09%), Query Frame = 1 Query: 31 RLDAFSMKLG-VDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 +L A MKLG DE VV++GVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFG GGWETNTLVSDLTTVICLDDYHLNDR GRKVSGRTALHT EQ+FDLM E L ALK G++VMKPIYNHVNGTLDTPEE+K TPIVI+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDMMERGHSLESI+ASIEARKPDFDA+IAPQRAQADVVLQV Sbjct: 45 KLQALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQV 259
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A836CLK3_9STRA (Phosphoribulokinase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK3_9STRA) HSP 1 Score: 371 bits (952), Expect = 6.280e-126 Identity = 187/224 (83.48%), Postives = 199/224 (88.84%), Query Frame = 1 Query: 7 SVSAGTLQRLDAFSMKLG-VDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGK-GGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 S S+ R A MKLG DE +V++GVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGFG GGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLM E L ALK G +V KPIYNHVNGTLD PEEIK TPI+I+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDM+ERGHSLESI+ASIEARKPDFDA+IAPQRAQADVVLQV Sbjct: 40 STSSKAAARWQALQMKLGDADEPIVVIGVAADSGCGKSTFMRRLTNIFGGSTVGPLGGGFGAPGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMAEQLAALKRGDSVKKPIYNHVNGTLDEPEEIKPTPIIIIEGLHPFVDQRVRDLLDFTIYLDISDEIKFAWKIQRDMLERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQV 263
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2Y062_9STRA (Phosphoribulokinase n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2Y062_9STRA) HSP 1 Score: 347 bits (891), Expect = 1.450e-116 Identity = 172/225 (76.44%), Postives = 191/225 (84.89%), Query Frame = 1 Query: 1 PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFG-KGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 P SVS T RL F KL E+VVL+GVAADSGCGKSTFMRRLTN+FGG++VGPLGGGFG +GGWETNTLVSD TTVICLDDYHLNDR GRKVSG TAL+T E FDLMYE LK LK GK + KPIYNHVNGTLDTPE I+ TPIVI+EGLHP D RV ELLDF +YLDISD++KFAWKIQRDM ERGHSLESI+ASIEARKPDFDA++APQ+ ADVV++V Sbjct: 43 PTSVSKRTGSRLQNFVAKLADGEQVVLIGVAADSGCGKSTFMRRLTNVFGGTNVGPLGGGFGAEGGWETNTLVSDTTTVICLDDYHLNDRNGRKVSGLTALNTLENNFDLMYEQLKELKSGKTISKPIYNHVNGTLDTPETIEPTPIVIIEGLHPMHDERVRELLDFSMYLDISDDVKFAWKIQRDMEERGHSLESIQASIEARKPDFDAYVAPQKQYADVVIEV 267
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: F8LSX2_LEPCH (Phosphoribulokinase (Fragment) n=1 Tax=Lepidodinium chlorophorum TaxID=107758 RepID=F8LSX2_LEPCH) HSP 1 Score: 344 bits (883), Expect = 1.090e-115 Identity = 164/206 (79.61%), Postives = 184/206 (89.32%), Query Frame = 1 Query: 55 LGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 LG DE VV++GVAADSGCGKSTFMRRLTN+FGG VGPLGGGFG GGWETNTLVSD TTVICLDDYHL+DR GRKVS RTAL TAEQ+FDLMYE + ALK G+ + KPIYNHVNGTLD PE IK TPIVI+EGLHPFVD RV +L+DF IYLDI+D++KFAWKI+RDM ERGHSLESIKASIEARKPDFDA++APQRA +D+V+QV Sbjct: 112 LGKDEPVVVIGVAADSGCGKSTFMRRLTNVFGGEQVGPLGGGFGGGGWETNTLVSDQTTVICLDDYHLDDRQGRKVSKRTALDTAEQKFDLMYEQIAALKRGETIKKPIYNHVNGTLDEPETIKPTPIVIIEGLHPFVDERVRKLIDFSIYLDITDDVKFAWKIRRDMQERGHSLESIKASIEARKPDFDAYVAPQRANSDLVIQV 317
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S3ZKD2_9STRA (Phosphoribulokinase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKD2_9STRA) HSP 1 Score: 341 bits (875), Expect = 1.790e-114 Identity = 165/208 (79.33%), Postives = 179/208 (86.06%), Query Frame = 1 Query: 49 MKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 M + D VVL+GVAADSGCGKSTFMRRLT IFGG++VGPLGGGF GGWETNTLVSD TTVICLDDYHLNDRGGRKV+GRTAL AE FDLMYE LK LK G + KPIYNHVNGTLDTPEEI T IVIVEGLHP DPRV ELLDF +YLDI+D++KFAWKIQRDM+ERGHSLESI+ SIEARKPDFDAF+APQR ADVV+QV Sbjct: 35 MTMAADGGVVLIGVAADSGCGKSTFMRRLTGIFGGTNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHLNDRGGRKVTGRTALDLAENNFDLMYEQLKELKAGNAIKKPIYNHVNGTLDTPEEITPTQIVIVEGLHPMADPRVRELLDFSLYLDITDDVKFAWKIQRDMVERGHSLESIQQSIEARKPDFDAFVAPQRGDADVVIQV 242
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A5JEM0_HETAK (Phosphoribulokinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JEM0_HETAK) HSP 1 Score: 337 bits (863), Expect = 1.000e-112 Identity = 165/211 (78.20%), Postives = 180/211 (85.31%), Query Frame = 1 Query: 40 AFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 A M L E+VVL+GVAADSGCGKSTFMRRLT +FG V LGGGFG GGWETNTLVS TTVICLDDYHLNDR GRKVSG TALH E FDLMYE LK LK GK + KPIYNHVNGTLDTPEE++ TPIVIVEGLHP +D RV ELLDF+IYLDISDEIKFAWKIQRDM ERGHSLESIKASIEARKPDF+AF++PQRA++D+V+QV Sbjct: 35 ALQMALKEGEEVVLIGVAADSGCGKSTFMRRLTGMFGTDGVQMLGGGFGNGGWETNTLVSPSTTVICLDDYHLNDRNGRKVSGLTALHEKENNFDLMYEQLKELKSGKTIKKPIYNHVNGTLDTPEEVEPTPIVIVEGLHPMLDDRVAELLDFRIYLDISDEIKFAWKIQRDMEERGHSLESIKASIEARKPDFEAFVSPQRAKSDIVIQV 245
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2WLY4_9STRA (Phosphoribulokinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLY4_9STRA) HSP 1 Score: 335 bits (860), Expect = 4.490e-112 Identity = 162/216 (75.00%), Postives = 184/216 (85.19%), Query Frame = 1 Query: 25 LQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 +Q A M L E +++G+AADSGCGKSTFMRR+T+ FGG VGPLGGGFG GGWETNTLVSDLTTVICLDDYHLNDR GRKVSG TAL+TAEQ+FDLMYEH+KALKEGK+VMKPIYNHVNGTLD PE+I+ TPI+I+EGLHPF D RV EL+DF +YLDIS ++K WKIQRDM ERGHSLESI ASIEARKPDFDAFI PQ+ AD V++V Sbjct: 38 VQSGSAMQMALKEGEVPIIIGLAADSGCGKSTFMRRVTSTFGGDVVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRQGRKVSGLTALNTAEQKFDLMYEHVKALKEGKSVMKPIYNHVNGTLDEPEKIEPTPIIIIEGLHPFHDDRVRELIDFSLYLDISPDVKLNWKIQRDMEERGHSLESIMASIEARKPDFDAFIEPQKKYADYVIEV 253
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2JQY6_9STRA (Phosphoribulokinase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQY6_9STRA) HSP 1 Score: 330 bits (846), Expect = 5.110e-112 Identity = 159/220 (72.27%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 13 SAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 S+ ++Q + M L EK +L+GVAADSGCGKSTFMRRLTNIFGG VGPLGGGF GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSG TAL+ E FDLM+E +K LK GK++ KPIYNHVNGTLDTPE I+ TPI+I+EGLHP D RV +LLDF +YLDISDE+K WKIQRDM ERGHSLESI ASIEARKPDFDA+IAPQ+A AD+ ++V Sbjct: 25 SSVSVQSTSSLQMALKEGEKPILIGVAADSGCGKSTFMRRLTNIFGGERVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGLTALNPLENNFDLMFEQMKDLKAGKSISKPIYNHVNGTLDTPETIEPTPIIIIEGLHPMHDERVRDLLDFSLYLDISDEVKLNWKIQRDMEERGHSLESILASIEARKPDFDAYIAPQKAFADICIEV 244
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A4D9D820_9STRA (Phosphoribulokinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D820_9STRA) HSP 1 Score: 335 bits (858), Expect = 9.320e-112 Identity = 162/208 (77.88%), Postives = 178/208 (85.58%), Query Frame = 1 Query: 49 MKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672 MKLG D+KV+L+GVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGF GGWETNTLVSD TTVICLDDYH NDR GRKV+GRTAL AEQ FDLMYE LKALKEGK V KPIYNHVNGTLD PEE+ TPIVIVEGLHP+ D RV +LLD+ IYLDISDEIK AWKIQRDM ERG +LE ++A IE RKPDF+ F+ PQ+ AD V+QV Sbjct: 47 MKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQV 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12890.1.1 >prot_P-wetherbeei_contig12890.1.1 ID=prot_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGback to top mRNA from alignment at P-wetherbeei_contig12890:136..1189- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12890.1.1 ID=mRNA_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1054bp|location=Sequence derived from alignment at P-wetherbeei_contig12890:136..1189- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12890:136..1189- >mRNA_P-wetherbeei_contig12890.1.1 ID=mRNA_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig12890:136..1189- (Phaeothamnion wetherbeei SAG_119_79)back to top |