mRNA_P-wetherbeei_contig1286.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI) HSP 1 Score: 165 bits (418), Expect = 5.110e-40 Identity = 81/161 (50.31%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 945 PNAALQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKELQLYVSECP 1424 P +L+ IVD+H DAL IHRAIR L + +HFDAHPDL + P +PA CF+P ELYD L +++ GIA WILPL ++GHL LWW+RP+ QFTDG HR VG+ ++ G L V+STAPY+VDDRL+C +D K L L VS P Sbjct: 14 PTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPR--------WARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVP 166
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.930e-34 Identity = 95/316 (30.06%), Postives = 143/316 (45.25%), Query Frame = 3 Query: 957 LQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKELQLYVSECPSADGGGNGGSSSGSADSVRALAVTAAPAVHTVAKNDADVASVCDPATVATAXXXXXXXXXXXXXXXTAVDAAGWRIGDGGGGGVDIDQQWVLDICLDFFSTENPFMEGLESLAGVDAARAFQEAFALPSFRGAGTALPHAQQIADETEFTRIFTALLDA 1901 ++VV+VD+H+ AL IH+AIRR++L + + ++HFDAHPDL P +PA F P +LYD LD S++GIA+++LPL+F GH++ L W++P Q T G +VGE NG L V S Y+VD+ ++ P + + LQL V E +D+ +SV P +G +VLDICLD+F+T NPF+ E GVD A+ + + F+ L HAQQ+ T T ++++ Sbjct: 5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPP--------WAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTKKQTLQLTVCEL-----------------------------------HDSPASSVRPP------------------------------LGP-----------FVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHRHHTSTMTGMMES 236
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A067CX65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX65_SAPPC) HSP 1 Score: 135 bits (341), Expect = 7.090e-31 Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 957 LQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKELQLYVSECPSA 1430 L+V +VD+H+ L IHRAIR++ L + ++H DAH DL PP LPA F P LYD LD SD+GIA+++LPLA+ GH+ RL WI+P Q G H VG+++ GCLGV S A Y+VD+ L+ P L+L V+E P+A Sbjct: 4 LEVHVVDDHHHVLEPIHRAIRQRRLPFANCTIVHVDAHADLAFPPSLPAATIFSPGALYDGLDASDAGIASFLLPLAYAGHIHRLVWIKPP--------WATQMAIGTHTFHVGQQKDTGCLGVTSHASYFVDENLYAPLDALEKPASLELTVAELPAA 154
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV) HSP 1 Score: 134 bits (337), Expect = 2.150e-30 Identity = 93/314 (29.62%), Postives = 132/314 (42.04%), Query Frame = 3 Query: 957 LQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKELQLYVSECPSADGGGNGGSSSGSADSVRALAVTAAPAVHTVAKNDADVASVCDPATVATAXXXXXXXXXXXXXXXTAVDAAGWRIGDGGGGGVDIDQQWVLDICLDFFSTENPFMEGLESLAGVDAARAFQEAFALPSFRGAGTALPHAQQIADETEFTRIFTALL 1895 L V +VD+H+ L IHRAIR++ L + F ++H DAH DL PP LPA F P LYD LD S++GIA+++LPLA+ GH+ RL WI+P Q G H VG+ ++ GCLGV S Y++D+ L+ P L+L V+E P+A V P +VLDICLD+FST NPF + + G D A + S++ LPH+ ++ E R+F + + Sbjct: 4 LGVHVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPP--------WATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALDKPASLELTVAELPAAP-------------------VPEGP--------------------------------------------------------------YVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRL----EHGRLFASTI 224
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: W2KW05_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KW05_PHYPR) HSP 1 Score: 128 bits (322), Expect = 3.690e-28 Identity = 74/186 (39.78%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 954 ALQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVAT--KELQLYVSECPSADGGGNGGSSSGSADSVRALAVTAA 1502 ++ VVIVD+H+ LP IH AIR++ L S +LH DAHPDL+ P V F+P +LYD LDES +GIA ++LPL F GH+ ++ W++P TG Q +S+G+R+SNG +G S P++V+D L+C ++ A+ + L+ +E SSSGSA +V A+T A Sbjct: 2 SVPVVIVDDHHHCLPDIHLAIRQRRLPFSDIHVLHVDAHPDLSFPTTTDTSVIFEPEKLYDKLDESVAGIAEFLLPLVFAGHVNQITWLKPSWATQMPTGAFRQ-------LSIGKRKSNGGMGATSELPHFVEDELYCSVEEIDASSLRTWDLFATEM----------SSSGSAAAVATEAITTA 170
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A833SRU7_PHYIN (UPF0489 domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SRU7_PHYIN) HSP 1 Score: 128 bits (321), Expect = 3.880e-28 Identity = 65/161 (40.37%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 954 ALQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVAT--KELQLYVSECPS 1427 A+ VVIVD+H+ LP IH AIR+++L + +LH DAHPDL+ P V F+P LYD LD+S +GIA ++LPL F GH+ ++ W++P TG Q +++G+R+SNG +GV S P++V+D L CP +D + + L+ +E S Sbjct: 2 AVPVVIVDDHHHCLPDIHLAIRQRLLPFAGIHVLHVDAHPDLSFPTSADTSVIFEPETLYDTLDKSVAGIAEFLLPLVFAGHVNQITWLKPSWATQMPTGAFKQ-------LAIGKRKSNGSVGVTSELPHFVEDELSCPVKDLEVSSVRMWDLFATETSS 155
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A225WZN4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZN4_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.960e-28 Identity = 64/162 (39.51%), Postives = 98/162 (60.49%), Query Frame = 3 Query: 957 LQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVAT--KELQLYVSECPSAD 1433 + VV+VD+H+ LP IH AIR++ L S +LH DAHPDL+ P + A V F+P LY+ LD+S +GIA ++LPL F GH+ ++ W++P G Q +++G+R+SNG +GV P++V+D LFCP +D + + L+ E S+D Sbjct: 1 MNVVVVDDHHHCLPDIHLAIRQRRLPFSEIHVLHVDAHPDLSFPAAVDASVIFQPDSLYELLDKSVAGIAEFLLPLVFAGHVNQISWLKPSWATQMPNGAYKQ-------LAIGKRKSNGAMGVTCELPHFVEDELFCPVEDMNTSSMRHWNLFAMETNSSD 155
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.200e-27 Identity = 89/321 (27.73%), Postives = 134/321 (41.74%), Query Frame = 3 Query: 951 AALQVVIVDEHNDALPAIHRAIRRKILG-HSFDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKEL-----QLYVSECPSADGGGNGGSSSGSADSVRALAVTAAPAVHTVAKNDADVASVCDPATVATAXXXXXXXXXXXXXXXTAVDAAGWRIGDGGGGGVDIDQQWVLDICLDFFSTENPFMEGLESLAGVDAARAFQEAFALPSFRGAGTALPHAQQIADETEFTRIFTALL 1895 A L+V +VD+H+ L IH+AIRR++L + F ++HFDAH DL P LPA V F+P LYD LD SD+GIA+++LPL + GH+ +L W++P Q G VG+ ++ CL + S Y+V++ L+ P + TK + QL V+E P V+ G Q ++LDICLD+FST NPF E L+ G + + ++ + LPH Q+ +F+ +L Sbjct: 2 AQLEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPP--------WAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMNNSLVQLTVAELP------------------------------------------------------------------MQVNLKG--------------QAYILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.630e-27 Identity = 94/311 (30.23%), Postives = 126/311 (40.51%), Query Frame = 3 Query: 918 GGTEGTMSPPNAALQVVIVDEHNDALPAIHRAIR-RKILGHSFDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHRISVG---------------ERRSNGCLGVNSTAPYYVDDRLFCPAQDFVATKELQLYVSECPSADGGGNGGSSSGSADSVRALAVTAAPAVHTVAKNDADVASVCDPATVATAXXXXXXXXXXXXXXXTAVDAAGWRIGDGGGGGVDIDQQWVLDICLDFFSTENPFMEGLESLAGVDAARAFQEAFA 1802 G EG L V + +HN+AL ++H AIR ++ MLH D+HPDL +PP +PA + FKPREL+ L +S++GIA +ILP + GHL+RL W+RP Q DG VG ER + G L V PYY D+ L CP +D K +++ V+ A+ C P V G D+ WVLDICLD+FS NPF L++ GV AA QE +A Sbjct: 29 GEKEGEAEKKIKTLPVYVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPT--------WADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVAG-----------------------------------------AATCTPQAF--------------------VQVCG-------------DRPWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVYA 257
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Match: H3GPL8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPL8_PHYRM) HSP 1 Score: 126 bits (316), Expect = 2.580e-27 Identity = 91/297 (30.64%), Postives = 138/297 (46.46%), Query Frame = 3 Query: 945 PNAALQVVIVDEHNDALPAIHRAIRRKILGHS-FDMLHFDAHPDLNIPPGLPAGVCFKPRELYDALDESDSGIAAWILPLAFEGHLKRLWWIRPKAKFYEATGGVPQFTDGPHR-ISVGERRSNGCLGVNSTAPYYVDDRLFCPAQDFVAT--KELQLYVSECPSADGGGNGGSSSGSADSVRALAVTAAPAVHTVAKNDADVASVCDPATVATAXXXXXXXXXXXXXXXTAVDAAGWRIGDGGGGGVDIDQQWVLDICLDFFSTENPFMEGLESLAGVDAARAFQEAFALPSFRGA 1823 P +AL VV+VD+H+ LP IH AIR++ L S +LH DAHPDL+ P L V F P LYD LDES +GIA ++LPL F GH+ ++ W++P + + Q G + + +G+R+ +G +GV S P++V+D LFC +D A+ + L+ +E S+ D + VAT A+D A + + +VLDI LD+FST +PF + LE+ G A + F+ ++ A Sbjct: 2 PASALPVVVVDDHHHCLPDIHLAIRQRRLPFSNIHVLHVDAHPDLSFPTALNTEVIFHPETLYDELDESVAGIAEFLLPLVFAGHVNQITWLKPAWATQKMLMVMLQMPAGSFKQLVIGKRKVSGAMGVTSELPHFVEDELFCAVEDMDASSVRNWDLFATEPSSSK----------------------------------------DSSAVAT----------------EAIDNARQK-----------SKGFVLDIDLDYFSTWDPFRKDLETRIGKSAVMIVTQVFSSVRYKRA 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1286.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1286.3.1 >prot_P-wetherbeei_contig1286.3.1 ID=prot_P-wetherbeei_contig1286.3.1|Name=mRNA_P-wetherbeei_contig1286.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=596bp MSPPNAALQVVIVDEHNDALPAIHRAIRRKILGHSFDMLHFDAHPDLNIPback to top mRNA from alignment at P-wetherbeei_contig1286:3110..6514- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1286.3.1 ID=mRNA_P-wetherbeei_contig1286.3.1|Name=mRNA_P-wetherbeei_contig1286.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3405bp|location=Sequence derived from alignment at P-wetherbeei_contig1286:3110..6514- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1286:3110..6514- >mRNA_P-wetherbeei_contig1286.3.1 ID=mRNA_P-wetherbeei_contig1286.3.1|Name=mRNA_P-wetherbeei_contig1286.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1788bp|location=Sequence derived from alignment at P-wetherbeei_contig1286:3110..6514- (Phaeothamnion wetherbeei SAG_119_79)back to top |