mRNA_P-wetherbeei_contig1286.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1286.2.1
Unique NamemRNA_P-wetherbeei_contig1286.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 5.700e-68
Identity = 129/232 (55.60%), Postives = 156/232 (67.24%), Query Frame = 1
Query:    1 MATKLDVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            MA K D+ST KGL  FNG +++KSY EG+S+S  D+++FA   G P+KA+ PHAYRW+IH+AA+KGVR   +   + +              AAK     XXXXX            A K    +  EKM  AK  K+  KKV+RSQ+V EVKPW+ E DL  LF KI   K+EGLVWGEA+KLVPVAFGVKKLV+SCV+ED+KVGVEDITD IE FEDEVQSVDMTTMNRL
Sbjct:    1 MAPKFDLSTPKGLMPFNGYISSKSYVEGYSYSQADADMFATCAGVPDKAKAPHAYRWYIHIAAIKGVRSLSLAPSSGSAPAAXXXXXXXXXXAAKATKVDXXXXXXXXXXXXXXXXXAAKPAEKSRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 8.120e-50
Identity = 111/227 (48.90%), Postives = 143/227 (63.00%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            D++T  GL   NG +T KSY EGF FS  DS +FAK+   P+  +YP+ YRW++H A+  G+R ++  Q   A    APKA+T       XXXXXXXXXX                          A    KEK K +ERSQVV+EVKPWEAE DL  L  KI A++V+GL WGE +KLVPVAFG+KKL++ C+I D+KV ++DITDAIE FED VQSVD+ +MN++
Sbjct:    5 DLNTDIGLKKLNGFLTAKSYVEGFQFSAADSALFAKVPSTPDAGKYPNVYRWYVHTASKLGLRVALSAQSGTA--AAAPKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKVLMDDITDAIESFEDYVQSVDIASMNKM 229          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A024TSA9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSA9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.810e-49
Identity = 119/253 (47.04%), Postives = 148/253 (58.50%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKE-------------------------KMEAAKKDK-EKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            DV +  GL   NG +T KSY EGF FS  DS +FAK    P+ A+ P+ YRW+IH+A+  G+R        VA   + P AA  + P A XXXXXXXX             + PK K P                             + EAAK  K EKAK VERSQVVLEVKPWEAE DLV L  KI A+++ GL WGE +KLVPVAFG+KKL+I C+I D+ V ++DIT+AIE FED VQSVD+ +MN++
Sbjct:    5 DVESEVGLKKLNGFLTAKSYIEGFQFSAADSALFAKFNAVPDAAKVPNVYRWYIHIASKLGLR--------VALAARTPSAAKPSTPKAXXXXXXXXX-------------STPKGKKPAADXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAAKAGKKEKAKPVERSQVVLEVKPWEAETDLVELAGKIKALEINGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 236          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: W4FR25_9STRA (EF1_GNE domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR25_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.050e-48
Identity = 111/235 (47.23%), Postives = 150/235 (63.83%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAAT-------AAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDK-EKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            DV++  GL   NG +T KSY EG+ FS  DS +F+K T  P+ A+ P+ YRW++H A+  G+R ++  ++ VA    +PKAA        + P AAK   XXXXXXX                       + +AAK  K EKAK VERSQVV+EVKPWEAE DL+ L  KI A+++ GL WGE +KLVPVA+G+KKL++ C+I D+ V ++DITDAIE FED VQSVD+ +MN++
Sbjct:    5 DVASEVGLKKLNGFLTAKSYIEGYQFSAADSTLFSKFTTVPDAAKVPNVYRWYVHTASKLGLRVALTARNQVAQ-PSSPKAAAKPSTPXASTPKAAKPADXXXXXXXXXXXX----XXXXXXXXXXXXXXRADAAKAGKKEKAKPVERSQVVIEVKPWEAETDLLDLAAKIKALEINGLTWGEGHKLVPVAYGIKKLLVQCIIVDDLVLLDDITDAIESFEDFVQSVDVASMNKV 234          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A7S2UXP5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.970e-48
Identity = 108/231 (46.75%), Postives = 141/231 (61.04%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEK----AKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            D+ +A GL + +  + T+SY EGFS S  D  VFA++ GAP+K+ Y HAYRW++H+AAL GV+   ++   VA    AP  AT+ PPA K     XXXXX                                      AK VERSQ++ EVKPWEA+ DL SLF KI+A+K EGL WGE Y++ PVAFG+ KLV+SCVI D+ VG++D+TD IE  EDEVQSVD+ TMN++
Sbjct:    7 DLKSAAGLKSLDEYLLTRSYIEGFSLSAADQSVFAQINGAPDKSSYVHAYRWYLHIAALGGVKS--IISAVVA---PAPAPATSQPPAGKGKKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPVERSQLIFEVKPWEADQDLKSLFAKITALKKEGLSWGEGYEIKPVAFGIMKLVMSCVIVDDLVGMDDVTDPIEAMEDEVQSVDVLTMNKM 232          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: T0PJI1_SAPDV (EF1_GNE domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PJI1_SAPDV)

HSP 1 Score: 167 bits (424), Expect = 2.520e-47
Identity = 115/240 (47.92%), Postives = 146/240 (60.83%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAE------------AAPKAKAPTMKEKMEAAKKDK-EKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            DV T  GL   NG +T +SY EGF FS  DS  FAKL+ AP+ ++YP+ YRW++H+AA  G                    A  AP AA XXXXXXXXXX         A+                        + +AAK  K EKAK +ERSQVV+EVKPWEAE DL +L  KI A++V GL WGE +KLVPVAFG+KKL++ C+I DE V ++DIT+AIEQFED+VQSVD+ +MN++
Sbjct:    5 DVHTDGGLKKLNGFLTARSYLEGFQFSAADSTTFAKLSSAPDASKYPNVYRWYVHIAAKLG-------------------RAAYAPKAAXXXXXXXXXXXXXXXXXXKPADDXXXXXXXXXXXXXXXXXXXXXXXRADAAKASKKEKAKPIERSQVVIEVKPWEAETDLEALAIKIKALEVNGLSWGEGHKLVPVAFGIKKLLVQCIIIDELVLLDDITEAIEQFEDDVQSVDVASMNKM 225          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.650e-47
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVA---WGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDK-EKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            D++T  GL   NG +T KSY EGF FS  DS +FAK+   P+ ++YP+ YRW++H AA  G+  ++  Q A                  PA K    XXXXXX                       + EAAK +K EK K +ERSQVV+EVKPWEAE DL  L  KI  V+V+GL WGE +KLVPVAFG+KKL+I C+I D+KV ++DIT+AIE FED VQSVD+ +MN++
Sbjct:    5 DLNTDIGLKKLNGFLTAKSYIEGFQFSAADSNLFAKVPATPDASKYPNVYRWYVHTAAKLGLHVALSAQSATPAAXXXXXXXXXXXXXXPAKKEAEDXXXXXXXXXXX------XXXXXXXXXXXXRAEAAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A024GJX5_9STRA (EF1_GNE domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJX5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.000e-42
Identity = 108/230 (46.96%), Postives = 136/230 (59.13%), Query Frame = 1
Query:    7 TKLDVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            T+LD    +GL   NG +T++SY +G+S S  D  V+ ++   PE + YP+ YRW++H+A+  G+R          W   A K          XXXXXXXXXX         AE A  AKA             KEK K VERSQVV EVKPWE E +L  L  KI A K EGL WGE +KLV VAFG+KKL++ CVI D+ V +EDITD IEQFED VQSVD+ +MN++
Sbjct:    6 TQLD--RPEGLKKLNGFLTSRSYIDGYSLSDTDLTVYKQIASCPEPSTYPNVYRWYVHIASKCGIR--------TLWSGSASKKXXXXXXXXXXXXXXXXXXXXXXXXXX-RAETAKNAKA-------------KEKKKVVERSQVVCEVKPWEQETNLEELAIKIKATKKEGLTWGEGHKLVDVAFGIKKLLVQCVILDDLVSLEDITDIIEQFEDYVQSVDIASMNKI 211          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: F0WHY5_9STRA (EF1 guanine nucleotide exchange domaincontaining protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.230e-42
Identity = 105/230 (45.65%), Postives = 136/230 (59.13%), Query Frame = 1
Query:    7 TKLDVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            T+LD    +GL   NG +T+KSY EG+S S  D  +F ++   PE +QYP+ YRW++H+A+  GVR          W   APK     P   +  XXXXXXXX              K +A T K     A         VERSQVV+EVKPW+ E DL +L  KI + K EGL WGE +KLV VA+G+KKL++ CVI D+ V +EDITD IEQFED VQSVD+ +MN++
Sbjct:    6 TQLD--KPEGLKKLNGFLTSKSYIEGYSLSDADLTLFKQIPSCPEPSQYPNVYRWYVHIASKFGVRAL--------WSGIAPKKTPTEPSKTQTEXXXXXXXXXXXXXX---XXXXXKKRAETAKN----AXXXXXXXXVVERSQVVVEVKPWDKETDLEALAIKIKSTKKEGLTWGEGHKLVDVAYGIKKLLVQCVILDDMVSLEDITDIIEQFEDSVQSVDIASMNKI 218          
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Match: A0A067D0F2_SAPPC (EF1_GNE domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D0F2_SAPPC)

HSP 1 Score: 154 bits (390), Expect = 2.670e-42
Identity = 109/231 (47.19%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   16 DVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQYPHAYR--WFIHVAALKGVRGSVVLQDAVAWGKKAP--KAATAAPPAAKXXXXXXXXXXVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVLEVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVIEDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL 696
            DV T  GL   NG +T +SY EGF FS  D+  F KL GAP+ ++YP+ YR  W    AA                       K A        XXXXXXXXXX         A+AA  +K              KEKAK +ERSQVV+EVKPWEAE DL +L  KI A++V GL WGE++KLVPVAFG+KKL++ C+I DE V ++DIT+AIEQFED+VQSVD+ +MN++
Sbjct:    5 DVHTDGGLKKLNGFLTARSYLEGFQFSAADNATFVKLAGAPDASKYPNVYRCPWLSPKAAAXXXXXXXXXXXXXXXXXXXXXXKPADDXXXXXXXXXXXXXXXXXXXXXXXXRADAAKASK--------------KEKAKPIERSQVVIEVKPWEAETDLEALAIKIKALEVNGLTWGESHKLVPVAFGIKKLLVQCIIIDELVLLDDITEAIEQFEDDVQSVDVASMNKM 221          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1286.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBH2_9PHAE5.700e-6855.60EF1_GNE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A485LAV1_9STRA8.120e-5048.90Aste57867_18076 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TSA9_9STRA2.810e-4947.04EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
W4FR25_9STRA1.050e-4847.23EF1_GNE domain-containing protein n=3 Tax=Aphanomy... [more]
A0A7S2UXP5_9STRA1.970e-4846.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T0PJI1_SAPDV2.520e-4747.92EF1_GNE domain-containing protein n=2 Tax=Saproleg... [more]
A0A6G0WJF4_9STRA5.650e-4746.75EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
A0A024GJX5_9STRA1.000e-4246.96EF1_GNE domain-containing protein n=1 Tax=Albugo c... [more]
F0WHY5_9STRA1.230e-4245.65EF1 guanine nucleotide exchange domaincontaining p... [more]
A0A067D0F2_SAPPC2.670e-4247.19EF1_GNE domain-containing protein n=1 Tax=Saproleg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1286contigP-wetherbeei_contig1286:1045..3149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPS7
Preferred nameCARS
PFAMsEF1_GNE,tRNA-synt_1e
Model size937
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01866,ko:K01868,ko:K01873,ko:K01875,ko:K01883,ko:K03232,ko:K15410
KEGG ReactionR02918,R03650,R03662,R03663,R03665,R08218
KEGG Pathwayko00970,ko05168,map00970,map05168
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005853,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006414,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008135,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons6
Evalue2.81e-73
EggNOG OGsCOG2092@1|root,KOG1668@2759|Eukaryota
EC6.1.1.1,6.1.1.11,6.1.1.16,6.1.1.3,6.1.1.9
Descriptiontranslation elongation factor activity
Cds size699
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1286.2.1prot_P-wetherbeei_contig1286.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1286 1045..2911 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185964.1089716-CDS-P-wetherbeei_contig1286:1044..12811683185964.1089716-CDS-P-wetherbeei_contig1286:1044..1281Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 1045..1281 +
1683185964.1191616-CDS-P-wetherbeei_contig1286:1442..16311683185964.1191616-CDS-P-wetherbeei_contig1286:1442..1631Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 1443..1631 +
1683185964.127196-CDS-P-wetherbeei_contig1286:1982..20241683185964.127196-CDS-P-wetherbeei_contig1286:1982..2024Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 1983..2024 +
1683185964.1350951-CDS-P-wetherbeei_contig1286:2228..23001683185964.1350951-CDS-P-wetherbeei_contig1286:2228..2300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 2229..2300 +
1683185964.1429071-CDS-P-wetherbeei_contig1286:2574..27001683185964.1429071-CDS-P-wetherbeei_contig1286:2574..2700Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 2575..2700 +
1683185964.1510756-CDS-P-wetherbeei_contig1286:2878..29111683185964.1510756-CDS-P-wetherbeei_contig1286:2878..2911Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1286 2879..2911 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185964.159038-UTR-P-wetherbeei_contig1286:2911..31491683185964.159038-UTR-P-wetherbeei_contig1286:2911..3149Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1286 2912..3149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1286.2.1

>prot_P-wetherbeei_contig1286.2.1 ID=prot_P-wetherbeei_contig1286.2.1|Name=mRNA_P-wetherbeei_contig1286.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp
MATKLDVSTAKGLAAFNGMMTTKSYCEGFSFSPVDSEVFAKLTGAPEKAQ
YPHAYRWFIHVAALKGVRGSVVLQDAVAWGKKAPKAATAAPPAAKAKAAV
EDDDDVDLFGDDDEAEAAPKAKAPTMKEKMEAAKKDKEKAKKVERSQVVL
EVKPWEAEADLVSLFNKISAVKVEGLVWGEAYKLVPVAFGVKKLVISCVI
EDEKVGVEDITDAIEQFEDEVQSVDMTTMNRL*
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mRNA from alignment at P-wetherbeei_contig1286:1045..3149+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1286.2.1 ID=mRNA_P-wetherbeei_contig1286.2.1|Name=mRNA_P-wetherbeei_contig1286.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2105bp|location=Sequence derived from alignment at P-wetherbeei_contig1286:1045..3149+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTACCAAGTTGGATGTTTCGACCGCCAAGGGCCTCGCCGCCTTCAA CGGCATGATGACTACCAAGAGTTACTGCGAAGGCTTCTCCTTCTCGCCAG TCGACAGCGAGGTTTTTGCGAAGCTCACCGGGGCGCCCGAGAAGGCACAA TACCCTCACGCGTACCGCTGGTTTATCCACGTGGCCGCGTTAAAGGGTGT CCGCGGGTCAGTGGTGCTTCAAGATGCTGTTGCATGGGTTTCTAAAAGAA TCTTGCAGCATCCGGGTCCCCCTGAGGGCAAATGGTTCCCAATCTCCGCC TCTCTACGCTGTTTCTCCTTGCCAGCCTCAACTTCGGCGGCGCCGCGTCG ACGGCGGCCGCCGCTCCGGCCCCGGCCGCGGCTGCGGGGTCGCCCAAGGG CAAGAAGGCGCCGAAGGCGGCGACGGCGGCGCCGCCCGCCGCGAAGGCGA AGGCGGCGGTGGAGGACGACGATGACGTGGACCTGTTCGGCGACGACGAC GAGGCGGAGGCGGCGCCGAAGGCGAAGGCGCCGACGATGAAGGAGAAGAT GGAGGCGGCCAAGAAAGACAAGGAGAAGGCCAAGAAGGTGCGCCGCCCGC GTGCCAATGACTGTGCTTTTCCTTTTTGGCATTTGTCTTTTCCTTTCATG TTTCCTTCCCTTTCCCGTGGACCTTCCTTCTCTGGAAGCAAAAGATAAAA TAAAATTGCGATTGGAGGAGATAAATCGTCCCATTCCTGTAAAATTCTGC GGTTTTATGAAAGCGTCTTCGCTCTTTGGAGGCTGCAGGTTTTTATGGGC TGTGTCTCATCTTTGTGGTGGTTCGTGCGGGCCCGGTGCCCTACCTTTGT CACAGCCTTTGTGCGCTGTTTGTCCCCTTTATCGCCGTTCCTTGTTGCCC GTGTTGCCGCCATCGCCGGTTTCCGCCGTCGCTTCCAGGTCGAACGCTCC CAAGTGGTGTTGGAAGTGAAGCCGTGGGAGGTGCGTCGTCGTCGCAGTCC TGGCGTTTCAGGGCGCTTCAGTACGAGGAAGTCCTCTGTTCGCTCTTCGC AGGACGCATGCCGCCACAATTTGTTTGTTTAGTACGTCGTCCTTGCGTCT CAGCTTCCCGCTTGTTTTGGACGCTGACACTTCTCCTTCTTGCCCTTCAT ACTTTCTTTGCTTCCCCCATTTGCTGTGTTGCAGGCGGAGGCGGATCTGG TGTCGCTCTTCAACAAGATCTCGGCCGTGAAGGTGGAGGGCCTCGTCTGG GGAGAGGTGAGAGAAGCGGAGCCAGCAGGCATTGATTGCGGGAATGAAGT GACGAGGAACGCATGTACAATGGGAAGCTTCTCAAATGAAAGTCCAAACA AGGCGGATTCTGTGCCACCGTTGGCCTCTGCAGGCGGTATACAGAAACGC GTAGGTGGCCGCGCCGCGAAATCCAAACTGGCGATCGACTGACTGCCCGA CAGACTGGGTGGCTGCTTTCCTCTCCGATCGAATCGACTCTGTTTTCGTT TCCACCCCATCCTGGCGTTCTTTCCTGCAGGCATATAAGCTGGTGCCGGT GGCGTTCGGCGTGAAGAAGCTGGTCATCTCGTGTGTGATCGAGGACGAGA AAGTCGGCGTGGAGGACATCACCGACGCCATCGAGCAGTTCGAGGACGAG GTCCAGGCGAGTGATAAACCAACAACTGAAGCCTCAACCGACCAAAAAGA CGACCAAACTCTAGTAATGTAGTAGACTAGGTGACACCTGGGCCGGACAC TGGACCCAAACGACCAGTTTTGCTTTTTTTCTTGCCCTGACGCCTTTCAT TTCCCCTTGCTTCTTTCATCCTCTCTTCGTGCAGTCCGTCGACATGACCA CCATGAACCGGCTTTAAGGGAAGGCTTTGCAGCTGTGGCGAAGTCTGACG AAGATACGGCGACTTTAGAACCGTAGCTCTGAGAAAGGGGGACGCGTGCC GGCGGCTTCGCTTCGGTTCTAAGGCGGCTGCCCCGGGGTCTACGACTTGG CATCAGGTCTGACTCAGATAACGGGCTGAGGAACGATTGGTCGCGCCGCC TCAATCTTGGAGGGCTCGCTGTGGTCGTGTTGAGTTAATACACTCATATA CGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1286:1045..3149+

>mRNA_P-wetherbeei_contig1286.2.1 ID=mRNA_P-wetherbeei_contig1286.2.1|Name=mRNA_P-wetherbeei_contig1286.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig1286:1045..3149+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTACCAAGTTGGATGTTTCGACCGCCAAGGGCCTCGCCGCCTTCAA
CGGCATGATGACTACCAAGAGTTACTGCGAAGGCTTCTCCTTCTCGCCAG
TCGACAGCGAGGTTTTTGCGAAGCTCACCGGGGCGCCCGAGAAGGCACAA
TACCCTCACGCGTACCGCTGGTTTATCCACGTGGCCGCGTTAAAGGGTGT
CCGCGGGTCAGTGGTGCTTCAAGATGCTGTTGCATGGGGCAAGAAGGCGC
CGAAGGCGGCGACGGCGGCGCCGCCCGCCGCGAAGGCGAAGGCGGCGGTG
GAGGACGACGATGACGTGGACCTGTTCGGCGACGACGACGAGGCGGAGGC
GGCGCCGAAGGCGAAGGCGCCGACGATGAAGGAGAAGATGGAGGCGGCCA
AGAAAGACAAGGAGAAGGCCAAGAAGGTCGAACGCTCCCAAGTGGTGTTG
GAAGTGAAGCCGTGGGAGGCGGAGGCGGATCTGGTGTCGCTCTTCAACAA
GATCTCGGCCGTGAAGGTGGAGGGCCTCGTCTGGGGAGAGGCATATAAGC
TGGTGCCGGTGGCGTTCGGCGTGAAGAAGCTGGTCATCTCGTGTGTGATC
GAGGACGAGAAAGTCGGCGTGGAGGACATCACCGACGCCATCGAGCAGTT
CGAGGACGAGGTCCAGTCCGTCGACATGACCACCATGAACCGGCTTTAA
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