mRNA_P-wetherbeei_contig12856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12856.1.1
Unique NamemRNA_P-wetherbeei_contig12856.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12856contigP-wetherbeei_contig12856:70..1924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G753
PFAMsGlyco_transf_41,Methyltransf_11,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
Model size825
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue6.81e-16
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_011010.1
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size825
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12856.1.1prot_P-wetherbeei_contig12856.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12856 70..1924 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185963.9418533-CDS-P-wetherbeei_contig12856:69..2101683185963.9418533-CDS-P-wetherbeei_contig12856:69..210Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 70..210 -
1683185963.9530828-CDS-P-wetherbeei_contig12856:282..3541683185963.9530828-CDS-P-wetherbeei_contig12856:282..354Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 283..354 -
1683185963.9617667-CDS-P-wetherbeei_contig12856:691..8051683185963.9617667-CDS-P-wetherbeei_contig12856:691..805Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 692..805 -
1683185963.9702125-CDS-P-wetherbeei_contig12856:1001..12591683185963.9702125-CDS-P-wetherbeei_contig12856:1001..1259Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 1002..1259 -
1683185963.9786274-CDS-P-wetherbeei_contig12856:1397..15661683185963.9786274-CDS-P-wetherbeei_contig12856:1397..1566Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 1398..1566 -
1683185963.9872782-CDS-P-wetherbeei_contig12856:1853..19241683185963.9872782-CDS-P-wetherbeei_contig12856:1853..1924Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12856 1854..1924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12856.1.1

>prot_P-wetherbeei_contig12856.1.1 ID=prot_P-wetherbeei_contig12856.1.1|Name=mRNA_P-wetherbeei_contig12856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
ESRGKDGAARAEELYRRALALNPRCPMALGSYATFLHRIKHDLPAAEAAY
AAATAAYPAHASVLCKYGGFLKHAVGRVDEAEVMFRRAIAANPTHAESLG
SLAVLLHAAGRPNGGDNDNGSGSSDGNGDGSSDSTVARLYDRAVKSDPHN
VNNLSNAGLFRAEVLKDLAGAEALYQRAMALDPQHANSVYNYAVLLDSGL
KDRQRAEAMYRRCLAANPRHGYALYNLAAAANMVPSDKGPAEYAEAGNLF
RRAVAACPKDALTLADYGRFLVTVE
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mRNA from alignment at P-wetherbeei_contig12856:70..1924-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12856.1.1 ID=mRNA_P-wetherbeei_contig12856.1.1|Name=mRNA_P-wetherbeei_contig12856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1855bp|location=Sequence derived from alignment at P-wetherbeei_contig12856:70..1924- (Phaeothamnion wetherbeei SAG_119_79)
GAAAGCCGCGGGAAGGACGGCGCGGCCAGGGCGGAGGAGCTTTACCGCAG
GGCACTTGCTCTGAACCCAAGGTGTATCCAACCAACCGACCCTCTCAGCA
TAGCTCTGTCCCCCTTGTTTTTGCTTCTTATTGGTTGAGGCACAGTATCT
TATTTGAGGCGTCGTACGTAAGGTTGTCGCTCCTATTTACATGGGAAGCT
TAGATAGGGGTGCTTTGTATCCAAGAAGGACGATTCCCCCGGCTTATCTC
CTCCCAGACCGGGTCGCAAAGCTGAAAGCTGTCACTTTCACCTCACACAG
GAGCTACCTATGTCTTTATCTGTCTAGCGAGAACCAATCGCAAACCGGTC
ACTCACAGGTGTCCGATGGCGCTCGGCAGTTACGCCACTTTCCTCCACCG
CATCAAGCATGACCTGCCCGCCGCCGAGGCTGCCTACGCGGCGGCGACGG
CGGCGTACCCGGCGCACGCTTCCGTCCTGTGCAAGTATGGCGGCTTCCTG
AAGCACGCCGTCGGAAGAGTGGACGAGGTGCAGTGGACTAAAAGCTTATC
TGCTTCTGGATTTTGTCTTTAACCACCGAAGTCTGCCTCCGACGCAACCC
CCTGTGTCTGTCCCTTTCTGCAACTATCCCATTTCTGCGATCGGACTCGG
GACGGGGCCAAGCAGGCGGAGGTCATGTTCCGGAGAGCCATCGCAGCCAA
CCCAACGCACGCCGAGAGCCTGGGCAGCCTAGCGGTGCTCCTACATGCGG
CGGGTAGACCTAATGGCGGCGATAACGACAACGGCAGCGGCAGCAGTGAT
GGGAACGGCGACGGCAGCAGTGACAGCACCGTCGCGAGGCTTTACGATCG
CGCTGTCAAGAGCGATCCGCACAACGTCAACAACCTCTCGAATGCCGGCC
TCTTTCGCGCCGAGGTGTTAAAGGTGCGTAGGCGACTGGGGGAGGCACAC
CATTTGGCGGTTGCTAATCGCATGAATTCAGTTGGAACTCTTGATACAGC
CCTGAATCAAAGAACTTGTTGTCCGCTTTCTTCCTGCGGACGGCTTTGAA
TTTATCCGTGATGTCATTGCTGCTCTCCACTGGCTGCGTGGCTGATGCAA
TGACGGCCGGCCGGCACAGGACCTTGCAGGGGCCGAAGCGCTGTACCAGC
GGGCCATGGCCCTTGACCCGCAGCACGCCAACAGCGTCTACAACTACGCC
GTGCTGCTCGACAGCGGCCTGAAGGACCGGCAGGTGCGGTGAAGGAAAAA
GGGTGAAGTGGATGAACGGAACCGGTGGGGGAACGGGTAAGGCGGGACGG
AGCAGCGGCGGTTATCAGCGGCGGTTCTGGCAGCAGACGTAGCGGTAGCG
GTGGTGACACATTTCCTTCCTTTCCTCGTTTCCCGTCGCTGTATATAGGG
GAACGATTTCACTGCCAGGGGAAGGTATTCGCCGCAGAGCAGCAGAATCG
TCGCTTGGGCCGGCAGCGGTCTGTTTGGGGTGCAGCGGTTTAAGCCAACC
AGCCGCCTGCTTTTCTCGCTTGTATCGCCGTCCGCACCCGTAACCGGTGC
TGCGGCGAGTGCCTCTGCAGCGCGCCGAGGCCATGTACCGCCGGTGCCTC
GCCGCCAACCCGCGGCACGGTTATGCGCTCTACAATCTCGCCGTCCTTCT
CGAAGAGCGCGCATCGCGAGCCGCCGCCGCCGCCGCCGCCGCCAGGACGG
CAGCCAGCGCGGAGGCGGCCGCAAACATGGTGCCGTCTGACAAGGGGCCG
GCGGAGTACGCGGAGGCCGGGAACCTGTTCCGCCGCGCCGTCGCGGCGTG
CCCGAAAGATGCACTGACTCTCGCCGACTACGGACGCTTCCTCGTTACAG
TCGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12856:70..1924-

>mRNA_P-wetherbeei_contig12856.1.1 ID=mRNA_P-wetherbeei_contig12856.1.1|Name=mRNA_P-wetherbeei_contig12856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig12856:70..1924- (Phaeothamnion wetherbeei SAG_119_79)
GAAAGCCGCGGGAAGGACGGCGCGGCCAGGGCGGAGGAGCTTTACCGCAG
GGCACTTGCTCTGAACCCAAGGTGTCCGATGGCGCTCGGCAGTTACGCCA
CTTTCCTCCACCGCATCAAGCATGACCTGCCCGCCGCCGAGGCTGCCTAC
GCGGCGGCGACGGCGGCGTACCCGGCGCACGCTTCCGTCCTGTGCAAGTA
TGGCGGCTTCCTGAAGCACGCCGTCGGAAGAGTGGACGAGGCGGAGGTCA
TGTTCCGGAGAGCCATCGCAGCCAACCCAACGCACGCCGAGAGCCTGGGC
AGCCTAGCGGTGCTCCTACATGCGGCGGGTAGACCTAATGGCGGCGATAA
CGACAACGGCAGCGGCAGCAGTGATGGGAACGGCGACGGCAGCAGTGACA
GCACCGTCGCGAGGCTTTACGATCGCGCTGTCAAGAGCGATCCGCACAAC
GTCAACAACCTCTCGAATGCCGGCCTCTTTCGCGCCGAGGTGTTAAAGGA
CCTTGCAGGGGCCGAAGCGCTGTACCAGCGGGCCATGGCCCTTGACCCGC
AGCACGCCAACAGCGTCTACAACTACGCCGTGCTGCTCGACAGCGGCCTG
AAGGACCGGCAGCGCGCCGAGGCCATGTACCGCCGGTGCCTCGCCGCCAA
CCCGCGGCACGGTTATGCGCTCTACAATCTCGCCGCGGCCGCAAACATGG
TGCCGTCTGACAAGGGGCCGGCGGAGTACGCGGAGGCCGGGAACCTGTTC
CGCCGCGCCGTCGCGGCGTGCCCGAAAGATGCACTGACTCTCGCCGACTA
CGGACGCTTCCTCGTTACAGTCGAA
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