mRNA_P-wetherbeei_contig12733.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12733.1.1
Unique NamemRNA_P-wetherbeei_contig12733.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.860e-26
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAK--GE------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKTRKNAEKR 309
            MGRYTTVQ+YSD+NP+  +V+YEQA   GE      GR++ DKVDNV GSTAGAGSGEFHMYRA RR E+ R+A +   A+ DE R  LEA   GK A+   KT K A KR
Sbjct:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKR 111          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.520e-24
Identity = 62/107 (57.94%), Postives = 74/107 (69.16%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGE--------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKL-EAARTGKQALCEEKTRK 294
            MGRYTTVQ+YSDNNP+ V V+Y+QAKG+        G++ V+K D V GS AGAGSGEFH YRAHRR EM R+A M  +A+  E   KL EA   GK   CEE+TRK
Sbjct:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNE-CEERTRK 106          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.340e-20
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGE-----------------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKT 288
            MGRYTTVQ+Y+DNNP+ VQV+Y QA G+                 G++KV KVDNV GSTAGAGSG+FH YRA R  E++R+  +   A +D+  ++ +     K+  CEE+T
Sbjct:    1 MGRYTTVQTYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCEERT 113          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.360e-18
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGE-------------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKTRKNAEKRKRRK 321
            MGRYT+VQ++SD + +   VTY+ A  +             G+  V++VDNV+GS+AGAGSG+FH YRA RR EM+R+A M    ++++ + + EA R  K    + K +K AEKR+RRK
Sbjct:    1 MGRYTSVQTFSDQDAQGAAVTYDAASKDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKAQQEFEATRKRKAEEFDAKMQKRAEKRRRRK 120          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A4D9D064_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D064_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.280e-16
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGEG----RIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDA 216
            MGRYT+VQ+Y DNNP+   V Y+  +       R K++K++NV GSTAGA S  FH+YRAHRR EM RLA+M   A
Sbjct:    1 MGRYTSVQAYGDNNPKIASVAYDGGEDRDGNPQRSKIEKLENVTGSTAGASSSSFHIYRAHRRTEMARLAEMEEKA 76          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.250e-16
Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGE----------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKM 204
            MGRYTTVQ+Y+DNNP    V+Y+QA G+          G +K +KVDN  GSTAGAGSGEFH+YR  R  EM R+A++
Sbjct:    1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQL 78          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A5A8DHY7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DHY7_CAFRO)

HSP 1 Score: 79.3 bits (194), Expect = 1.770e-15
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGEGRIKVD---KVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKTRKNAEKRKRRK 321
            MGRYT+VQ+YSD+NPR V V Y+ ++ +    VD    +  V GSTAGAGS  ++ YR  R  EM R+ +M TDA      +   A    +QA CE++TR+NAE+RKR+K
Sbjct:    1 MGRYTSVQTYSDDNPRMVAVGYDASRAKAGSAVDLRPDLVTVQGSTAGAGSTTYNKYRRMREREMARVREMETDATAAALDEAFRARVADEQAKCEDRTRRNAERRKRKK 110          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A1V9ZAQ6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZAQ6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.710e-15
Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGEGRI-------------KVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTD 213
            MGRYTT QSY+DN  +   V Y+  K +  +             K +KV+NVAGSTAGAGSGEFHMYRA RR EM+RL  M  +
Sbjct:    1 MGRYTTEQSYADNEAKVGTVPYDVVKDKSEVAVKDADAGPKEKFKFNKVENVAGSTAGAGSGEFHMYRAARRREMERLGGMEAE 84          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A067CZD8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZD8_SAPPC)

HSP 1 Score: 75.9 bits (185), Expect = 7.300e-15
Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNN------------------PRNVQVTYEQAKGEGRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKTRKNAEKRKR 315
            MGRYTT Q+Y+D                    P   + + E  + + R K ++VDNVAGSTAGAGSGEFHMYRA RR EM+R+  M  + ++       +  R   QA  EEKTR+ A KR+R
Sbjct:    1 MGRYTTEQTYTDKAATVGTVPYEVVKEKEEAAPAPAEASKESKESKERFKFNRVDNVAGSTAGAGSGEFHMYRAARRREMERVGAMEAEHKKKMEDLAFQEKRKRAQAELEEKTRQKAAKRRR 123          
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.270e-15
Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 1
Query:    1 MGRYTTVQSYSDNNPRNVQVTYEQAKGE------------------GRIKVDKVDNVAGSTAGAGSGEFHMYRAHRRLEMQRLAKM 204
            MGRYTTVQ+Y+DNNP    V+Y+QA G                   G +K +KVDN  GSTAGAGSGEFH+YR  R  EM R+A++
Sbjct:    1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQL 86          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12733.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZ44_9STRA2.860e-2658.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LC75_ECTSI1.520e-2457.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2K9_9STRA2.340e-2046.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A225X3R8_9STRA7.360e-1843.33RNA-binding protein n=1 Tax=Phytophthora megakarya... [more]
A0A4D9D064_9STRA1.280e-1653.95Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6S9D7T2_9STRA2.250e-1655.13Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A5A8DHY7_CAFRO1.770e-1546.36Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A1V9ZAQ6_9STRA5.710e-1551.19Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CZD8_SAPPC7.300e-1542.28Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S2HD40_9STRA9.270e-1550.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12733contigP-wetherbeei_contig12733:823..1146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LC75
Preferred namePRKRIP1
PFAMsDUF1168
Model size324
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001933,GO:0003008,GO:0003014,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006469,GO:0008150,GO:0009892,GO:0010563,GO:0010605,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0033673,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045859,GO:0045936,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0097159,GO:0098772,GO:1901363
Exons1
Evalue2.5e-25
EggNOG OGsKOG4055@1|root,KOG4055@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF1168
Ec32 orthologEc-20_004720.1
Descriptionprotein kinase inhibitor activity
Cds size324
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185959.2098224-CDS-P-wetherbeei_contig12733:822..11461683185959.2098224-CDS-P-wetherbeei_contig12733:822..1146Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12733 823..1146 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12733.1.1prot_P-wetherbeei_contig12733.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12733 823..1146 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12733.1.1

>prot_P-wetherbeei_contig12733.1.1 ID=prot_P-wetherbeei_contig12733.1.1|Name=mRNA_P-wetherbeei_contig12733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
MGRYTTVQSYSDNNPRNVQVTYEQAKGEGRIKVDKVDNVAGSTAGAGSGE
FHMYRAHRRLEMQRLAKMSTDAEEDERRDKLEAARTGKQALCEEKTRKNA
EKRKRRKK
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mRNA from alignment at P-wetherbeei_contig12733:823..1146-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12733.1.1 ID=mRNA_P-wetherbeei_contig12733.1.1|Name=mRNA_P-wetherbeei_contig12733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig12733:823..1146- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCGCTACACGACGGTGCAGTCGTACAGCGACAACAACCCGCGCAA TGTGCAGGTCACGTACGAGCAGGCCAAAGGCGAGGGGCGCATCAAGGTGG ACAAGGTTGACAATGTGGCCGGAAGCACCGCGGGCGCCGGAAGCGGCGAG TTCCACATGTACCGCGCCCACAGGCGGCTGGAGATGCAGCGCCTCGCCAA GATGAGCACCGACGCGGAGGAGGACGAGCGGAGAGACAAGCTCGAGGCTG CGCGGACCGGGAAGCAAGCGCTGTGTGAGGAGAAAACGCGCAAGAACGCC GAGAAGCGCAAGCGGCGCAAGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12733:823..1146-

>mRNA_P-wetherbeei_contig12733.1.1 ID=mRNA_P-wetherbeei_contig12733.1.1|Name=mRNA_P-wetherbeei_contig12733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig12733:823..1146- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCGCTACACGACGGTGCAGTCGTACAGCGACAACAACCCGCGCAA
TGTGCAGGTCACGTACGAGCAGGCCAAAGGCGAGGGGCGCATCAAGGTGG
ACAAGGTTGACAATGTGGCCGGAAGCACCGCGGGCGCCGGAAGCGGCGAG
TTCCACATGTACCGCGCCCACAGGCGGCTGGAGATGCAGCGCCTCGCCAA
GATGAGCACCGACGCGGAGGAGGACGAGCGGAGAGACAAGCTCGAGGCTG
CGCGGACCGGGAAGCAAGCGCTGTGTGAGGAGAAAACGCGCAAGAACGCC
GAGAAGCGCAAGCGGCGCAAGAAG
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