mRNA_P-wetherbeei_contig1273.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1273.1.3
Unique NamemRNA_P-wetherbeei_contig1273.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A482SMN3_9ARCH (DUF155 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMN3_9ARCH)

HSP 1 Score: 207 bits (528), Expect = 4.230e-55
Identity = 101/219 (46.12%), Postives = 153/219 (69.86%), Query Frame = 2 
Query: 1349 KDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGL 2005
            +D+FYF+YGCV+FWG+T+ EEK  L+E++ F++ PVS  E+E S D M++V+D  + P   I  D++ LR++  +E+L+ S+A+AQS+KLFVFE +V +++E T+++P  LA+ G +   K  L+++IG++F    EVNL S ILD PDF W +D +   Y     YL +  RVQ+LN RL V+RELL +L  Q  D ++  LE IVIWLIA+E+V+G+
Sbjct:  251 QDIFYFEYGCVVFWGLTSLEEKAALNELEAFTQQPVSPVELENSFDTMEFVFDRSANPQRPIRFDRMKLRSLRVEEKLALSYAMAQSSKLFVFEQKVLQSVERTRYLPKELAEQGKISCSKKDLNRLIGQLFVEQTEVNLFSSILDTPDFLWDDDEYFPIYDYTRSYLEVDDRVQLLNSRLSVIRELLDVLTAQVADNNSARLEWIVIWLIAIEIVMGI 469
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A835ZB52_9STRA (DUF155 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB52_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.330e-54
Identity = 112/232 (48.28%), Postives = 152/232 (65.52%), Query Frame = 2 
Query: 1331 VAFPKH--KDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDK--ISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIV--IWLIALELVLGLV 2008
            +A P H  KD+F   YGC+IFWG T  EE +LLSEI+KF+  PVS SE+E+S D M + +       +   I  D++ L T  A E+LSYS A+AQSAKLFVFE R+   IE T+  P  L  TG + L +  ++K+IGRV    NEVNLHSD+LD P+FFW+  TWE +Y+RL  YL +P R+ V+NKRLDV+RELL +L  Q  + HA  LE++V  +W + +  ++ LV
Sbjct:  216 LAVPSHIGKDMFILPYGCIIFWGFTPAEELKLLSEIRKFAVGPVSESELEQSQDDMTFCFVDAGDDKESRVIKADELVLSTDSALEKLSYSFALAQSAKLFVFEERLGNIIEQTRVYPEELKLTGKIQLTQMQMNKLIGRVLVERNEVNLHSDVLDKPEFFWETQTWEPEYQRLCTYLDMPLRLVVINKRLDVLRELLDVLHNQVTNTHAIRLEVVVELVWNVGVRDIMHLV 447
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: F0WJI1_9STRA (Uncharacterized protein AlNc14C122G6706 n=3 Tax=Albugo TaxID=65356 RepID=F0WJI1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.780e-54
Identity = 110/222 (49.55%), Postives = 150/222 (67.57%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KDVFYF  GC +FWG++  EE++ L  +  FS  PV   E+E     M YVY   +    +I ND I L +  A E+L+ S A+AQSAKL VFE RVEETI+ TKH+P  LA TG++H  +  +SK+IGR+F   N+VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LE IVIWLI  E+V+ +V
Sbjct:  243 EQKDVFYFATGCTVFWGLSRAEEQEHLRALISFSMGPVKQVEVED----MDYVYGDSN----RIVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVVVQIV 456
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A6H5JX01_9PHAE (DUF155 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX01_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.000e-53
Identity = 110/233 (47.21%), Postives = 152/233 (65.24%), Query Frame = 2 
Query: 1322 GGGVAFPKHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVY----DPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            GG  A  +HKD+ +F YG V+FWG +  EEK++LS + +F    VS +E+ +S D M +VY         PL    ND+I L T D  E+L+YS ++AQSAKLFVFE R++  IE T   P  LA TG + L +  + +++GRV    NEVNLHSDILD P++FW+ED WE  Y+ L  YL IP RV  LNKRL ++RELL +L  Q+ + HAT LE+I+++LI +E+ + LV
Sbjct:  330 GGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMMGKVSETELAQSFDDMTFVYRHRGGKRGVPL---KNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIVYLIFVEVAIELV 559
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A3F2RCQ5_9STRA (DUF155 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RCQ5_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.120e-53
Identity = 106/222 (47.75%), Postives = 146/222 (65.77%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KD FYF  GC +FWG+T  EE+  L  +  FS  PV   E+E     M Y+Y   S     I ND I L +  A E+L+ S A+AQS+KL VFE RVE+TI +TKH+P  LA TG++   +  +SK+IGR+F   ++VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LEMIVIWLI  E+ + +V
Sbjct:   14 QQKDAFYFATGCAVFWGLTRAEEQAHLMALGTFSVGPVKQVEVED----MDYMYGDASI----ICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEDTIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVV 227
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: K3WZW5_GLOUD (DUF155 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZW5_GLOUD)

HSP 1 Score: 200 bits (509), Expect = 3.330e-53
Identity = 109/222 (49.10%), Postives = 149/222 (67.12%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KDVFYF  GC +FWG+T  EE+  L  + +FS  PV   E+E     M Y Y   ++    I ND I L +  A E+L+ S A+AQSAKL VFE RVEETI+ TKH+P  LA TG++   +G +SK+IGR+F   ++VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LE IVIWLI  E+V+ +V
Sbjct:  195 RQKDVFYFATGCTVFWGLTRMEEQAHLRALLQFSVGPVKQIEVED----MDYTYGDATS----IVNDAITLSSNLASEKLAISFAMAQSAKLDVFEERVEETIQQTKHIPQNLATTGSIQYSQGDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKMMRYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVVVQIV 408
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A484EF75_BRELC (DUF155 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF75_BRELC)

HSP 1 Score: 200 bits (509), Expect = 4.660e-53
Identity = 108/222 (48.65%), Postives = 147/222 (66.22%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KD FYF  GC +FWG+T  EE+  L  +  FS  PV   E+E     M Y Y   S+    I ND I LR+  A E+L+ S A+AQS+KL VFE RVEETI +TKH+P  LA TG++   +  +SK+IGR+F   ++VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LEMIVIWLI  E+ + +V
Sbjct:  208 QQKDAFYFATGCAVFWGLTRAEEQAHLVALSSFSVGPVKQVEVED----MDYTYGDASS----ICNDAITLRSNRASEKLAISFAMAQSSKLDVFEERVEETIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVV 421
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A8K1CNT9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNT9_PYTOL)

HSP 1 Score: 199 bits (507), Expect = 1.070e-52
Identity = 109/222 (49.10%), Postives = 146/222 (65.77%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KDVFYF  GC +FWG+T  EE+  L  +  FS  PV   E+E     M Y Y   S    +I ND I L +  A E+L+ S A+AQSAKL VFE RVEETI+ TKH+P  LA TG++   +  +SK+IGR+F   N+VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LE IVIWLI  E+ + +V
Sbjct:  216 RQKDVFYFGTGCTVFWGLTRAEEQAHLRALMAFSVGPVKQVEVED----MDYTYGESS----RIFNDAITLESNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIVRNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQIV 429
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A3M6V7Z5_9STRA (DUF155 domain-containing protein n=34 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6V7Z5_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.460e-52
Identity = 108/222 (48.65%), Postives = 147/222 (66.22%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KD FYF  GC +FWG+T  EE+  L  +  FS  PV   E+E     M Y+Y   S     I ND I L +  A E+L+ S A+AQS+KL VFE RVEETI +TKH+P  LA TG++   +G +SK+IGR+F   ++VNL+SD+LD PDFFW++D +E  YK++  YL +  RVQ+LN RLD++RELL +L +Q   +H T LEMIVIWLI  E+ + +V
Sbjct:  190 QQKDAFYFATGCAVFWGLTRAEEQAHLVALAVFSVGPVKQVEVED----MDYMYGDSSI----ICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEETIRETKHVPQNLAATGSIQYSQGDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVV 403
[Close]
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Match: A0A2D4BKL3_PYTIN (DUF155 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKL3_PYTIN)

HSP 1 Score: 199 bits (507), Expect = 1.890e-52
Identity = 109/222 (49.10%), Postives = 146/222 (65.77%), Query Frame = 2 
Query: 1343 KHKDVFYFQYGCVIFWGMTATEEKQLLSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDAKERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGALSKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRVQVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLV 2008
            + KDVFYF  GC +FWG+T  EE+  L  +  FS  PV   E+E     M Y Y  +S    +I ND I L +  A E+L+ S A+AQSAKL VFE RVEETI+ TKH+P  LA TG++   +  +SK+IGR+F   N+VNL+SD+LD PDFFW++D +E  YK++  YL +  RV +LN RLD++RELL +L +Q   +H T LE IVIWLI  E+ + LV
Sbjct:  242 RQKDVFYFGTGCTVFWGLTRAEEQAHLRALAAFSVGPVKQVEVED----MDYTYGDVS----RIVNDAITLSSNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVAILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQLV 455
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1273.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482SMN3_9ARCH4.230e-5546.12DUF155 domain-containing protein n=1 Tax=archaeon ... [more]
A0A835ZB52_9STRA1.330e-5448.28DUF155 domain-containing protein n=1 Tax=Tribonema... [more]
F0WJI1_9STRA2.780e-5449.55Uncharacterized protein AlNc14C122G6706 n=3 Tax=Al... [more]
A0A6H5JX01_9PHAE1.000e-5347.21DUF155 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A3F2RCQ5_9STRA1.120e-5347.75DUF155 domain-containing protein n=2 Tax=Phytophth... [more]
K3WZW5_GLOUD3.330e-5349.10DUF155 domain-containing protein n=1 Tax=Globispor... [more]
A0A484EF75_BRELC4.660e-5348.65DUF155 domain-containing protein n=1 Tax=Bremia la... [more]
A0A8K1CNT9_PYTOL1.070e-5249.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6V7Z5_9STRA1.460e-5248.65DUF155 domain-containing protein n=34 Tax=Peronosp... [more]
A0A2D4BKL3_PYTIN1.890e-5249.10DUF155 domain-containing protein n=1 Tax=Pythium i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1273contigP-wetherbeei_contig1273:1362..6823 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog653948.CCA21430
Preferred nameRMD1
PFAMsDUF155
Model size2403
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0008150,GO:0008152,GO:0010467,GO:0012505,GO:0016020,GO:0031090,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0098588,GO:0098805,GO:0098852,GO:0140053
Exons12
Evalue9.98e-57
EggNOG OGsCOG1723@1|root,KOG2861@2759|Eukaryota
Descriptionpositive regulation of mitochondrial translation
Cds size1686
COG categoryH
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.9121869-UTR-P-wetherbeei_contig1273:1361..17081683185958.9121869-UTR-P-wetherbeei_contig1273:1361..1708Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1273 1362..1708 -
1683185959.0483277-UTR-P-wetherbeei_contig1273:6453..68231683185959.0483277-UTR-P-wetherbeei_contig1273:6453..6823Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1273 6454..6823 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.9291372-CDS-P-wetherbeei_contig1273:1708..17411683185958.9291372-CDS-P-wetherbeei_contig1273:1708..1741Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 1709..1741 -
1683185958.9403486-CDS-P-wetherbeei_contig1273:2015..21651683185958.9403486-CDS-P-wetherbeei_contig1273:2015..2165Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 2016..2165 -
1683185958.9572704-CDS-P-wetherbeei_contig1273:2559..26251683185958.9572704-CDS-P-wetherbeei_contig1273:2559..2625Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 2560..2625 -
1683185958.9738488-CDS-P-wetherbeei_contig1273:2916..30111683185958.9738488-CDS-P-wetherbeei_contig1273:2916..3011Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 2917..3011 -
1683185958.9847083-CDS-P-wetherbeei_contig1273:3248..33061683185958.9847083-CDS-P-wetherbeei_contig1273:3248..3306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 3249..3306 -
1683185958.9951153-CDS-P-wetherbeei_contig1273:3728..37741683185958.9951153-CDS-P-wetherbeei_contig1273:3728..3774Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 3729..3774 -
1683185959.0024235-CDS-P-wetherbeei_contig1273:4020..40711683185959.0024235-CDS-P-wetherbeei_contig1273:4020..4071Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 4021..4071 -
1683185959.0097167-CDS-P-wetherbeei_contig1273:4294..43561683185959.0097167-CDS-P-wetherbeei_contig1273:4294..4356Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 4295..4356 -
1683185959.0174773-CDS-P-wetherbeei_contig1273:4615..47361683185959.0174773-CDS-P-wetherbeei_contig1273:4615..4736Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 4616..4736 -
1683185959.0247602-CDS-P-wetherbeei_contig1273:4972..53061683185959.0247602-CDS-P-wetherbeei_contig1273:4972..5306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 4973..5306 -
1683185959.0319138-CDS-P-wetherbeei_contig1273:5502..56501683185959.0319138-CDS-P-wetherbeei_contig1273:5502..5650Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 5503..5650 -
1683185959.0390828-CDS-P-wetherbeei_contig1273:5931..64531683185959.0390828-CDS-P-wetherbeei_contig1273:5931..6453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1273 5932..6453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1273.1.3prot_P-wetherbeei_contig1273.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1273 1709..6453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1273.1.3

>prot_P-wetherbeei_contig1273.1.3 ID=prot_P-wetherbeei_contig1273.1.3|Name=mRNA_P-wetherbeei_contig1273.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=562bp
MPIGPDSLLLPPGISSAAAYGSSLTRSLPGSGASSVVGSPQIQGIILSGG
GGGGGGTAGGTGGGTGGGGGGGAQRSEVGWAADAASTSTVATGTAGAGAG
AGAGGSSVGATAAALRMASIEAGALAAAQAAQAAAAAGGRLGPPQWIDTH
KFDVLHSSTLFEGCLLNEILAAAQAAAEAEARAEAEARAAMERAAAEALA
ARDGRDGSDDHGGIGLRMGGFPGAKASGLGEALEGLGGGAPMIDGNSPIP
TPLQTPNHGGSSPMVLPQPAPAAPPVSALPALAALKLGAAVATAGGIDAS
GSGAPAGGGGRDGAVAGGGGVAFPKHKDVFYFQYGCVIFWGMTATEEKQL
LSEIKKFSRAPVSLSEMERSHDVMQYVYDPLSTPLDKISNDQIPLRTMDA
KERLSYSHAVAQSAKLFVFELRVEETIEDTKHMPAALAQTGTVHLEKGAL
SKMIGRVFTSWNEVNLHSDILDVPDFFWQEDTWEGDYKRLGDYLHIPTRV
QVLNKRLDVVRELLKLLQEQAKDEHATHLEMIVIWLIALELVLGLVEIYI
QLGWERAPVVD*
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mRNA from alignment at P-wetherbeei_contig1273:1362..6823-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1273.1.3 ID=mRNA_P-wetherbeei_contig1273.1.3|Name=mRNA_P-wetherbeei_contig1273.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5462bp|location=Sequence derived from alignment at P-wetherbeei_contig1273:1362..6823- (Phaeothamnion wetherbeei SAG_119_79)
CCAGGCCCCAGCCTGCGGCGGCAGCAGCGCCACCGCTGCAGGGGCGACGC
CACCGCCGCGGCCGCAGCGGCCGCTGCCACCGGGCCCGCTGCAGCTGTAT
CTGCCGCAACCGCTCGGGTCGCCGGATGGTCGGACGTCGCGAACGGTGTC
CCTCGAAAAGAGCGCGTCGGGTGTTGGCGGCGGGTATGGCATCGGTGTTG
GGAGTGGAGGGGCGAGCGCAGGAGGCAGCTCGCTGGCGGCGGTGGCGGCA
GCGCGTCGGGTTTCGCTGCTGGATTCGGCGCCGGTCCCGGTTCCGGGCAG
CGGGGGCGGTAGCGGTGGCGGTGGTGGCGGCGGCGGGAGCGCGTTCGCAT
CTCCGACGGCGGGGGTGCCGATGCCGATCGGGCCGGACTCCCTGCTACTG
CCGCCGGGCATCTCCTCGGCTGCAGCGTACGGCAGCAGCCTTACGCGGTC
CCTGCCAGGCTCCGGCGCCTCATCCGTCGTCGGCAGCCCGCAGATCCAAG
GTATCATCCTGTCAGGGGGCGGCGGTGGCGGCGGCGGCACCGCCGGCGGC
ACCGGCGGCGGCACCGGCGGCGGTGGGGGCGGCGGCGCACAAAGGTCGGA
GGTCGGCTGGGCCGCCGATGCCGCGAGCACTTCAACTGTCGCTACCGGCA
CGGCAGGAGCGGGAGCGGGAGCGGGAGCGGGCGGATCATCGGTGGGGGCA
ACGGCGGCAGCGCTGCGCATGGCGTCGATCGAAGCGGGCGCGCTGGCGGC
AGCGCAGGCAGCGCAGGCGGCAGCGGCGGCCGGCGGGCGGCTCGGCCCAC
CGCAGTGGATCGACACGCACAAGTTCGATGTTTTGCACAGCAGCACCCTC
TTTGAGGGCTGCCTGCTCAACGAAATTTTGGCAGCGGCGCAGGTGAGGGA
AGAGCAAGAGCCGAGTCGATGGAAGCAAAGTGCAGCTGCGAAAGTGCGCG
CCTCTGTAAAGTGGCGGCGTCCGTGTTTGTCGTTGTCGTGGGAGTGGTAG
TGTGGCAGGCGATCGCAGTGGGTATGGCTGTGGTATTCAAGGTGTTGCAT
AGAAGACGTCTGATCCGCCACTCACCAAGCGGTTGTCATTTTTGATAGCG
TTCATGCCTTATTATACTCCATTCTAAACTTTTTCTCGCGCTTCTTGCAA
TGCTGTTTCCCGCAACGATCCAGGCAGCGGCCGAGGCGGAGGCGCGAGCG
GAGGCGGAGGCACGAGCGGCCATGGAGCGCGCTGCGGCAGAAGCGCTTGC
GGCGAGAGATGGCAGGGACGGCAGCGACGATCACGGCGGTATAGGGCTCC
GTATGGGTGGCTTTCCTGGAGGTGAGGCTTCTAGATTGCGTGACCCACCG
TTAGGTACTGTTGCTTTGTATAGGATATGTGTCGGTTGCGGGGAGAAGGC
TGGGGGGCATCCGATTCGAGGAGGGAAACTGCGACGATCGCCCTTGAGAT
TGGTTTTGGGTAAGCGAGAAATTTCAACCAACTACTGCCCCCCTGCCCCA
TGTGTCGCGGAGGACAGCCAAGGCCAGTGGGCTGGGAGAGGCCCTGGAGG
GCCTTGGCGGCGGAGCTCCGATGATCGATGGGAACTCGCCAATACCGACG
CCGCTCCAAACGCCCAACCATGGCGGCAGCAGCCCCATGGTACTGCCACA
GCCGGCGCCTGCGGCGCCGCCGGTATCCGCCCTGCCGGCGCTGGCGGCGC
TGAAGCTGGGGGCGGCCGTGGCGACTGCCGGCGGCATTGACGCGAGCGGT
AGCGGTGCTCCGGCGGGCGGCGGCGGGAGAGATGGCGCAGTGGCCGGCGG
GGGCGGGGTGGCATTTCCGAAGCATAAGGACGTCTTTTACTTCCAGTACG
GGTGAGCCGGCTGGGTTTTTGGGGTTGCCTGGAGTTTTTCCTGAGGCAGT
CAGTCTTTTTTTTGGTCTAGAAAATGTCGAACTGTCTTGTGAACCATTGC
TGACTGTTGTTTTTATTGCAGCTTTCCTGCTAGGGTCCACGTTATTTCGG
CAATAACGTCTGCGATCAAGCCATTTGGGCGAGAGCCGTCACCCATGCTC
TCCGCCGCCGGTATTTTTATTGCTCTTACCCGCTTAGGTGCGTCATCTTT
TGGGGCATGACGGCCACGGAGGAGAAGCAGTTGCTCTCGGAAATCAAGAA
GTTTTCGCGCGCCCCGGTGTCGCTCTCAGAGATGGAGCGGAGCCACGACG
TGATGCAGGTCAATTGGCTGCTGCAGGAGACATTTCTGGCTTTGCCCTTT
CTTGTGAAGGTTTTGTTGCCATGCGCAGGAGCGCGGCAGCGCGCCGGGGC
CAACCGCAAGCCACAAGCAGCTGCCGCTGCCGAGCAGGGTGGAGGATGAT
CGAGGGCGGCTCGGTTTGGCTTTCTAGCTATCCGTTACACAATTGGAACG
CGCCCTGATCTTGCTCATTACCACTCAGTCCCGTCTTCCGCACGTACGCG
CTGCTCTTGCTTCTCAGTACGTCTACGACCCGCTTTCAACGCCGCTCGAC
AAGATTAGCAACGACCAAATCCCGCTACGGTGAGCAGATTTCCATCTCCG
TTTAAAGCAATGCTCTCGGTGTCTTCCTTACTTGCGGGGAGACTGGCGGA
GCGTAACGCGTTTTCGATTGCTTGAGCGTGCAAGAAATGTTTCACCGTGT
CAGTACTGTCAGAGGAACGTGTGCGTGTGCCCCTCTGTCCTTTTGCTGAC
ACATCTTTTCTCTCTTCTTCCTCGGCGCTGTTTTTTTCTGTCCGGTGTGC
AGGACGATGGATGCGAAAGAGCGCCTGAGCTACTCGCACGCCGTCGCGCA
GAGGTATGCTCGTGGCTTCAAACATGTGACAAAGAGAGGCTGCTTGCTCC
ATTGTCCCATTAGCGGATTTGGTAAATCGCTTACCAGCAGCGTAAGTGTT
TTCCTCGATTGTCCGCCCTTCTCTCGCACATATTCGGCTTCACGGCGTCG
CATCTTTTACTTGACTATCTCATTTCTCCACCCTTTTCCGTTTCTTCCCG
CTTGGCCTTCCGCTCGCTCCCGGCCGCCATCCTGCCCAACACCCAACAGT
GCGAAGCTCTTCGTGTTCGAGCTGCGTGTCGAAGAGACCATCGAGGTTCG
TTTCTTTCCCGTCTGACGAAGCGGCTGGGCTGGGCTGGGCTGTATCGGGC
TGGGCTGGGATGGGCTGGGCTAGGCTGGGCTCGGTGGTAAGGTGGTTGGC
GGGCTGGCCGTGGTTGGCTATAGTTGCTTCTTTGCGCTGCCTTTTCACGG
CTCTTTATCAGGCTGGTGTTTGCCGGCCGGAACACTGGCGGGCAGGCTGG
TGGGCGGGCGGCTCCGTCTCCCTCCCACTCTGTCTGGCGTTGTGGTCGAA
CAATACATGGAACAGGTCCCACCCTTTTTCCGGTGCACCATGGATCTTGT
TGTGCCTGCGTGCTTTTTCTTGCAGGCCGCATTATCACTCTCACGACTGC
GCGAATCTTCGTTTTCCGTCTCCGTGTGTGCTGTACTGCAAACGCCCCGG
CTCCCACCTCTTTTCAGGACACGAAGCACATGCCAGCGGCGCTGGCCCAG
ACTGGAACCGTCCACCTGGAGAAAGGTGCGGTCCTTCATCAAACGAAGCC
GGTGATGCACTTGCCTCTTCTCTTGCGTTCTTCCGGTTGATGTTATCCGT
TTCGGCATCGCCAGCGGGAGCTCTATTCTTTGTGAAACTCTTCTTGTTGA
CATAACAGTCGCGTTGCCGGTTTTCCCGACTTAATAGGCTGACTGGTCAC
CCCTGCTGTCCCACTGTCGATGCTGTCGCCGTCCCCACCGCTGCCGCGTC
CCTCGTACACAGGCGCGCTGAGCAAGATGATCGGGCGCGTGTTCACGAGC
TGGAACGAGGTGAACCTCCACAGCGACATTCTCGACGTTCCCGACTTTTT
CTGGCAGGTGTGTCCGGTCTTGGTGTCGCCGTCCGTTGATTACGCTCAGG
GTTTGCTGACGCTGCTGCCCGATACAGCCGCTGCCCGCTGCAAGCGCTAC
AGCTGTCCACCGCCGTGGCTCGCTGTGCCGTGGCCGTCTCTCAGACCAAT
GCCTTGCCATCTGATTGTCCGTCTGCGGGCTTGCATAGGCTATCTGCGTG
TCGGCCGTAGTTATTGTCTTTCCAGATGTGATGTTGATCTTGAACCCGCT
TGAAGAGTAGGACCTGTTCCCCTGCATGCTTTCCCCTCTGCGGTGCAGGA
GGACACCTGGGAGGGCGACTACAAACGGCTAGGCGATTACCTCCACATCC
CGACGCGGGTTCAGGTGCGCCCAACATGGGGTCAAAGGGGAAGCGAATCA
GATCTTGGAGTAATATAGTTTCCAAAACGAGGAACGTCGCTCTAGCTCGA
GCAGCGGTTCTGCGCGCTGCTCGTGCGCCTCGCCCTGATGCACATTCAAA
GTGGTGATGCATAGTCGACACGCGCCGATGCACCGCCGAAGTGTTTTTCC
GCCGTCCTGCCGCCACCAATCCGTCGCCGCCGCCCCTGCCGTTGCCCCTC
CGCCGCCGCCCCTGCCGCCGCCGCCGCCGCCGCCCCTGCCGCCGCCGCCG
CCGTCGCCGCGGCGGCCTTTGCCGGCGTCGTCGATGCCGCCCCTCAAACC
CTCCGCATCCGGCCGCCGCCCGGTGACGACCGCTGTGCACGCCGCGCTGC
CCTTGCAGGTGCTGAACAAGCGGCTAGACGTGGTGCGGGAGTTGCTAAAA
CTCTTGCAGGAACAGGCGAAGGACGAACATGCGACGCATCTGGAGATGAT
TGTCATCTGGCTTATCGCGCTTGAATTGGTGCTGGGACTCGTCGAAATCT
ACATACAGGCAAGGGCCGGGCCGCGATCCACAATCCGTTCCCTGTGTCTG
TGTGGGTGTGCGTGGGCGCGTGTGTGCGCTCGTATTCTCCTTGCCGGTTT
TCTTAGGTGGCGGTATGCTCACGTTGCTCTTCCAAATAAGAGTTTCACTT
TTGAGGGTCGAGCAGAACAAGGTTGATGCTTCAATAATCCGACGGCTGCT
TCCCTTAAAAGAAGGAAGCACTTTTCTGACCGCATCCTCCCTTCCTTTCC
TCCTGCATCTGTCGGTCGCATGTCATTTGCAGCTAGGATGGGAGCGCGCC
CCCGTCGTCGACTGACGCGGCCAGGGGCCGAAAAGAAACGGCGGTGGGGG
GTTGAGCGGTCGCAATGACCAGCGGCGCCATACTTAGTCTCGGTAATCGC
GGGATTCCATCTGCGGCAGCTTGCGATCCATCGCTGTTGTAGCGCCCTTG
TGCTGCGTCGACGACGTTGGAAATTGGAAGGCGGGGGCACGCCCGGTACA
GTCGCGTTTTACCAGAGGTGGTTTGCGATGGGTCAAAGCAGGGGATCAAG
GAGGATCTTAGCCGGGGTAGATAAGAGGCAGTCAAAAGAAAGCATACTTA
CTTTCCGTCCATGCCCCGGCAGACGGCCGGTGTAGAGAGTTAGGGAAGCG
AAAAACACACAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1273:1362..6823-

>mRNA_P-wetherbeei_contig1273.1.3 ID=mRNA_P-wetherbeei_contig1273.1.3|Name=mRNA_P-wetherbeei_contig1273.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1686bp|location=Sequence derived from alignment at P-wetherbeei_contig1273:1362..6823- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGATCGGGCCGGACTCCCTGCTACTGCCGCCGGGCATCTCCTCGGC
TGCAGCGTACGGCAGCAGCCTTACGCGGTCCCTGCCAGGCTCCGGCGCCT
CATCCGTCGTCGGCAGCCCGCAGATCCAAGGTATCATCCTGTCAGGGGGC
GGCGGTGGCGGCGGCGGCACCGCCGGCGGCACCGGCGGCGGCACCGGCGG
CGGTGGGGGCGGCGGCGCACAAAGGTCGGAGGTCGGCTGGGCCGCCGATG
CCGCGAGCACTTCAACTGTCGCTACCGGCACGGCAGGAGCGGGAGCGGGA
GCGGGAGCGGGCGGATCATCGGTGGGGGCAACGGCGGCAGCGCTGCGCAT
GGCGTCGATCGAAGCGGGCGCGCTGGCGGCAGCGCAGGCAGCGCAGGCGG
CAGCGGCGGCCGGCGGGCGGCTCGGCCCACCGCAGTGGATCGACACGCAC
AAGTTCGATGTTTTGCACAGCAGCACCCTCTTTGAGGGCTGCCTGCTCAA
CGAAATTTTGGCAGCGGCGCAGGCAGCGGCCGAGGCGGAGGCGCGAGCGG
AGGCGGAGGCACGAGCGGCCATGGAGCGCGCTGCGGCAGAAGCGCTTGCG
GCGAGAGATGGCAGGGACGGCAGCGACGATCACGGCGGTATAGGGCTCCG
TATGGGTGGCTTTCCTGGAGCCAAGGCCAGTGGGCTGGGAGAGGCCCTGG
AGGGCCTTGGCGGCGGAGCTCCGATGATCGATGGGAACTCGCCAATACCG
ACGCCGCTCCAAACGCCCAACCATGGCGGCAGCAGCCCCATGGTACTGCC
ACAGCCGGCGCCTGCGGCGCCGCCGGTATCCGCCCTGCCGGCGCTGGCGG
CGCTGAAGCTGGGGGCGGCCGTGGCGACTGCCGGCGGCATTGACGCGAGC
GGTAGCGGTGCTCCGGCGGGCGGCGGCGGGAGAGATGGCGCAGTGGCCGG
CGGGGGCGGGGTGGCATTTCCGAAGCATAAGGACGTCTTTTACTTCCAGT
ACGGGTGCGTCATCTTTTGGGGCATGACGGCCACGGAGGAGAAGCAGTTG
CTCTCGGAAATCAAGAAGTTTTCGCGCGCCCCGGTGTCGCTCTCAGAGAT
GGAGCGGAGCCACGACGTGATGCAGTACGTCTACGACCCGCTTTCAACGC
CGCTCGACAAGATTAGCAACGACCAAATCCCGCTACGGACGATGGATGCG
AAAGAGCGCCTGAGCTACTCGCACGCCGTCGCGCAGAGTGCGAAGCTCTT
CGTGTTCGAGCTGCGTGTCGAAGAGACCATCGAGGACACGAAGCACATGC
CAGCGGCGCTGGCCCAGACTGGAACCGTCCACCTGGAGAAAGGCGCGCTG
AGCAAGATGATCGGGCGCGTGTTCACGAGCTGGAACGAGGTGAACCTCCA
CAGCGACATTCTCGACGTTCCCGACTTTTTCTGGCAGGAGGACACCTGGG
AGGGCGACTACAAACGGCTAGGCGATTACCTCCACATCCCGACGCGGGTT
CAGGTGCTGAACAAGCGGCTAGACGTGGTGCGGGAGTTGCTAAAACTCTT
GCAGGAACAGGCGAAGGACGAACATGCGACGCATCTGGAGATGATTGTCA
TCTGGCTTATCGCGCTTGAATTGGTGCTGGGACTCGTCGAAATCTACATA
CAGCTAGGATGGGAGCGCGCCCCCGTCGTCGACTGA
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