mRNA_P-wetherbeei_contig12720.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12720.1.1
Unique NamemRNA_P-wetherbeei_contig12720.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12720.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12720contigP-wetherbeei_contig12720:580..960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7918.ENSLOCP00000007471
Preferred nameSENP1
PFAMsPeptidase_C48
Model size381
Max annot lvl33208|Metazoa
KEGG koko:K08592
Hectar predicted targeting categoryother localisation
GOsGO:0002682,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005912,GO:0005924,GO:0005925,GO:0006282,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006807,GO:0006915,GO:0006919,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008234,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010724,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016787,GO:0016925,GO:0016926,GO:0016929,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0023052,GO:0030054,GO:0030055,GO:0030162,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0036211,GO:0042176,GO:0042177,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045637,GO:0045646,GO:0045739,GO:0045861,GO:0045862,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0061136,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070122,GO:0070137,GO:0070138,GO:0070139,GO:0070140,GO:0070161,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0140096,GO:1901564,GO:1901799,GO:1902680,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1903706,GO:1904331,GO:1904333,GO:2000026,GO:2000058,GO:2000059,GO:2000112,GO:2000116,GO:2000278,GO:2000573,GO:2001020,GO:2001022,GO:2001056,GO:2001141
Exons1
Evalue3.94e-12
EggNOG OGsCOG5160@1|root,KOG0778@2759|Eukaryota,38HPZ@33154|Opisthokonta,3BCKW@33208|Metazoa,3CYJ0@33213|Bilateria,48944@7711|Chordata,48Y5A@7742|Vertebrata,49Z7W@7898|Actinopterygii
EC3.4.22.68
DescriptionSUMO1 sentrin specific peptidase 1
Cds size381
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.7044249-CDS-P-wetherbeei_contig12720:579..9601683185958.7044249-CDS-P-wetherbeei_contig12720:579..960Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12720 580..960 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12720.1.1prot_P-wetherbeei_contig12720.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12720 580..960 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12720.1.1

>prot_P-wetherbeei_contig12720.1.1 ID=prot_P-wetherbeei_contig12720.1.1|Name=mRNA_P-wetherbeei_contig12720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
FTGTADIFSLCHLCMPTNLGHSHWVLAAIDFTGEQLVILDTMAAGQSYET
VFNLLAGIVHHEAANRFAAADDSSTASWARLASRGLEVSQRDGGDNCGAF
TIMFACCLSRGEPLTFSMKHVQFLRRR
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mRNA from alignment at P-wetherbeei_contig12720:580..960-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12720.1.1 ID=mRNA_P-wetherbeei_contig12720.1.1|Name=mRNA_P-wetherbeei_contig12720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig12720:580..960- (Phaeothamnion wetherbeei SAG_119_79)
TTTACCGGCACAGCGGATATCTTTTCGCTGTGTCACCTCTGCATGCCCAC
CAACCTCGGCCACAGTCATTGGGTGCTGGCAGCTATCGACTTCACCGGTG
AGCAGCTTGTGATTCTTGACACGATGGCGGCCGGGCAATCCTACGAGACG
GTCTTCAACCTGTTGGCTGGAATCGTGCACCACGAGGCGGCGAACAGGTT
CGCGGCGGCGGACGACTCCAGCACGGCCAGTTGGGCGCGGCTTGCGTCGA
GGGGGCTAGAAGTCTCGCAGCGGGATGGTGGTGACAACTGCGGCGCCTTC
ACTATCATGTTCGCGTGCTGCCTGAGCCGCGGGGAGCCGCTTACCTTTTC
GATGAAGCACGTGCAGTTTCTGCGGCGGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12720:580..960-

>mRNA_P-wetherbeei_contig12720.1.1 ID=mRNA_P-wetherbeei_contig12720.1.1|Name=mRNA_P-wetherbeei_contig12720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig12720:580..960- (Phaeothamnion wetherbeei SAG_119_79)
TTTACCGGCACAGCGGATATCTTTTCGCTGTGTCACCTCTGCATGCCCAC
CAACCTCGGCCACAGTCATTGGGTGCTGGCAGCTATCGACTTCACCGGTG
AGCAGCTTGTGATTCTTGACACGATGGCGGCCGGGCAATCCTACGAGACG
GTCTTCAACCTGTTGGCTGGAATCGTGCACCACGAGGCGGCGAACAGGTT
CGCGGCGGCGGACGACTCCAGCACGGCCAGTTGGGCGCGGCTTGCGTCGA
GGGGGCTAGAAGTCTCGCAGCGGGATGGTGGTGACAACTGCGGCGCCTTC
ACTATCATGTTCGCGTGCTGCCTGAGCCGCGGGGAGCCGCTTACCTTTTC
GATGAAGCACGTGCAGTTTCTGCGGCGGCGG
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