mRNA_P-wetherbeei_contig12715.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: A0A354T5P6_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A354T5P6_9BACT) HSP 1 Score: 180 bits (457), Expect = 1.480e-56 Identity = 87/113 (76.99%), Postives = 94/113 (83.19%), Query Frame = 1 Query: 7 MPKIALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAIAR 345 M +IALIGTAGR YPL ELW+AMT DV WI P DVL+SGGAAWADHLAVHA+L+GWCAGL LYLPAPL GGRFAGPFKSAGSTANYYHQRFS VI ED+L QV AI + Sbjct: 1 MARIALIGTAGRDKNYPLTRELWDAMTGDVGVWINPEDVLISGGAAWADHLAVHAWLKGWCAGLELYLPAPLEGGRFAGPFKSAGSTANYYHQRFSGVIGEDTLAQVAHAIEK 113
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: UPI0018D0C8FF (hypothetical protein n=1 Tax=Achromobacter sp. 2789STDY5608633 TaxID=1806501 RepID=UPI0018D0C8FF) HSP 1 Score: 124 bits (310), Expect = 2.280e-33 Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 67 ELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFEP 369 ELW AMT D+ + D LVSGGAAWADHLAVHAYL GW L LYLPAP G F GP KSA S AN+YH+RFSA I ++S Q+ AI RGA+ E+EP Sbjct: 4 ELWLAMTTDLRGRVGRKDRLVSGGAAWADHLAVHAYLNGWVDQLTLYLPAPFERGTFLGPTKSAASAANFYHERFSAAIGDNSRQQIALAITRGAQTEYEP 104
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: A0A240UJG8_9BURK (DNA helicase n=1 Tax=Acidovorax carolinensis TaxID=553814 RepID=A0A240UJG8_9BURK) HSP 1 Score: 118 bits (295), Expect = 2.310e-28 Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 13 KIALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFK-SAGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFEP 369 ++A+IGTAGR A+ + LW+AM +D S + P D LVSGGAAWADHLAV +L G L L+ PAPL GG FAGP + SAGS ANYYH F D L ++++AIA GA +P Sbjct: 871 RMAIIGTAGRDKAHEMDRALWDAMLSDARSRVLPTDTLVSGGAAWADHLAVRLFLDGAVQHLELHFPAPLEGGAFAGPARDSAGSAANYYHSMFQKATGIDGLREIEQAIAAGASTTAQP 990
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: UPI001485BDE7 (UvrD-helicase domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI001485BDE7) HSP 1 Score: 115 bits (288), Expect = 2.030e-27 Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 13 KIALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFEP 369 +IA+IGTAGR + + LW+AM AD+ S + P D+LVSGGAAWADHLAVH YLQG GL L+LPAP +F GP +S+ + ANYYHQRF +SL ++ A+ +V EP Sbjct: 847 RIAVIGTAGRDKSETMNRVLWDAMVADLRSRVGPDDILVSGGAAWADHLAVHVYLQGHVKGLELHLPAPFDDIQFQGPGQSSATAANYYHQRFHQATGINSLEELHCALMCEIQVTTEP 965
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: A0A2E4R455_9BURK (Uncharacterized protein n=2 Tax=Pusillimonas (ex Stolz et al. 2005) TaxID=305976 RepID=A0A2E4R455_9BURK) HSP 1 Score: 108 bits (271), Expect = 3.270e-27 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 16 IALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAI-ARGAKVEFEPV 372 +A+IGTAGR P+ +LW AM D+ I P D LVSGGAAWADHLAVHA+ +GW L L+LPAP+ F GP +SA + AN Y ++FSA+ S Q++ + A G V EP+ Sbjct: 12 LAVIGTAGRDKTQPMDXDLWYAMCDDLRERISPNDHLVSGGAAWADHLAVHAFDKGWVKQLTLFLPAPMGXAGFIGPQRSAANAANXYXRKFSAITRIRSXAQLRXVVRAPGVTVYEEPI 131
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: A0A522FGJ1_9BURK (Uncharacterized protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A522FGJ1_9BURK) HSP 1 Score: 108 bits (269), Expect = 7.530e-27 Identity = 63/129 (48.84%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 1 IAMPKIALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLV----GGRFA--GPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFEP 369 +++ +A+IGTAGR + LW AM D + D LVSGGAAWADHLAV A+L C G+ LYLPAPLV G RF GP +S+G ANYYH+RFSA + +D+ Q+ EA GA + EP Sbjct: 1 MSLRTLAVIGTAGRDKTKIMDRSLWNAMFEDFIDRVRSDDTLVSGGAAWADHLAVQAFLILRCQGIRLYLPAPLVKTEKGWRFQELGP-RSSGGAANYYHERFSAALRQDTRAQIAEAAKYGAVINAEP 128
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: A0A023WYM3_PSEST (Uncharacterized protein n=7 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A023WYM3_PSEST) HSP 1 Score: 104 bits (259), Expect = 1.140e-25 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 16 IALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFE 366 IA+IGTAGR +P+ WE + V ++ PGD LVSGGAAWADH AV A+ +G A L L+LPAP F+G ++G AN+YH++FS I D+L +QEAI GA+ ++ Sbjct: 12 IAVIGTAGRDKQFPMDISHWEFICRAVRFYVRPGDHLVSGGAAWADHAAVWAFNEGLSASLTLHLPAPFEAS-FSGGNGTSGGAANHYHRQFSRAIRRDTLADIQEAILGGAQCTYQ 127
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: H1KQE8_METEX (Uncharacterized protein n=2 Tax=Methylorubrum extorquens TaxID=408 RepID=H1KQE8_METEX) HSP 1 Score: 87.0 bits (214), Expect = 1.010e-18 Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 16 IALIGTAGRSA-AYPLIPELWEAMTADVNSWIEPGDV--LVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKS-AGSTANYYHQRFSAVIAEDSLGQVQEAIARGA 351 +A+IGTAGR A L EL++AM A + + LVSGGAAWADHLAV A+L+G L L+LPA GRF G + TAN YH FS ++ D+LGQV +AI RGA Sbjct: 2 LAVIGTAGRGTDADRLSAELYDAMYARTLDAMRTWGIRSLVSGGAAWADHLAVRAFLEGEADALRLFLPARFERGRFGGTAPNDVARTANRYHDAFSRMLGIDTLGQVAKAIDRGA 117
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: UPI001CE42915 (hypothetical protein n=1 Tax=Xenophilus sp. Marseille-Q4582 TaxID=2866600 RepID=UPI001CE42915) HSP 1 Score: 86.3 bits (212), Expect = 1.120e-18 Identity = 51/109 (46.79%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 16 IALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPL--VGGRFAGPFKSAGSTANYYHQRFSAVIAEDSLGQVQEA 336 IA+IGTAGR PL W+ M A I G +VSGGAAWADH+AV G L L+LPAP+ F G KSAGS ANYYH +FS + ED+ ++ +A Sbjct: 5 IAIIGTAGRGT--PLTKAHWDFMVATALEVIPAGRHVVSGGAAWADHVAVRLLTLGHAGALTLHLPAPMDETDFSFVGVRKSAGSAANYYHHQFSQALGEDTRAELFDA 111
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Match: UPI001EDECFBE (hypothetical protein n=1 Tax=Methylobacterium hispanicum TaxID=270350 RepID=UPI001EDECFBE) HSP 1 Score: 86.7 bits (213), Expect = 1.420e-18 Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 16 IALIGTAGRSA-AYPLIPELWEAMTADVNSWIEPGDV--LVSGGAAWADHLAVHAYLQGWCAGLCLYLPAPLVGGRFAGPFKS-AGSTANYYHQRFSAVIAEDSLGQVQEAIARGAKVEFEP 369 +A+IGTAGR A L L++AM A + + LVSGGAAWADHLAV A+L+G A L L+LPA GRF G + TAN YH FS + D+L Q+ EAI RGA P Sbjct: 2 LAVIGTAGRGTDADRLSVGLYDAMYARAVETMRDWGIRALVSGGAAWADHLAVRAFLEGEAASLRLFLPARFEHGRFGGSAPNDVARTANRYHDAFSRAVGVDTLAQLAEAIDRGAAASVHP 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12715.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12715.1.1 >prot_P-wetherbeei_contig12715.1.1 ID=prot_P-wetherbeei_contig12715.1.1|Name=mRNA_P-wetherbeei_contig12715.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp MPKIALIGTAGRSAAYPLIPELWEAMTADVNSWIEPGDVLVSGGAAWADHback to top mRNA from alignment at P-wetherbeei_contig12715:1..372- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12715.1.1 ID=mRNA_P-wetherbeei_contig12715.1.1|Name=mRNA_P-wetherbeei_contig12715.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig12715:1..372- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12715:1..372- >mRNA_P-wetherbeei_contig12715.1.1 ID=mRNA_P-wetherbeei_contig12715.1.1|Name=mRNA_P-wetherbeei_contig12715.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig12715:1..372- (Phaeothamnion wetherbeei SAG_119_79)back to top |