mRNA_P-wetherbeei_contig12711.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A5S6QFS2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QFS2_TRIMR) HSP 1 Score: 94.0 bits (232), Expect = 2.110e-21 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 EW+AA+ E+LAAH RN W S++P+G+ I RWVF K +DGT+ + KARL A+G ++ +DY TFAP++S +R LLALA + +F V+QM Sbjct: 8 EWLAAVDEELAAHYRNRSWE-ISNLPKGKKAIKSRWVFKTKCKADGTVEKRKARLVAKGYLQKAGIDYEETFAPILSYSSLRLLLALAVQNDFYVNQM 104
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 96.7 bits (239), Expect = 3.360e-21 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQ 291 EW AM +++A + G + + +P GR IGCRWV+ KR SDG I+RYKARL AQG S+ P LDY TFAPV+ +R LLA+AAE N E+ Q Sbjct: 29 EWKRAMDDEIAQLRKLGTYA-PADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQ 124
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A6S7GU81_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU81_PARCT) HSP 1 Score: 94.0 bits (232), Expect = 2.990e-20 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 +W A+ + +AH +N W ++P GR I CRWVF K +DG++ R+KARL A+G S+ P LDY TF+PV +R LLA+A +L+ EVHQM Sbjct: 826 QWKQALDNEYSAHIKNNTWT-LGNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIAKQLDLEVHQM 922
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A6S7GU92_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU92_PARCT) HSP 1 Score: 93.6 bits (231), Expect = 3.800e-20 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 +W A+ + +AH +N W ++P GR I CRWVF K +DG++ R+KARL A+G S+ P LDY TF+PV +R LLA+A +L+ EVHQM Sbjct: 332 QWKQALDNEYSAHIKNNTWT-LGNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIANQLDLEVHQM 428
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A6S7HIB2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIB2_PARCT) HSP 1 Score: 93.2 bits (230), Expect = 5.580e-20 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 +W A+ + +AH +N W ++P GR I CRWVF K +DG++ R+KARL A+G S+ P LDY TF+PV +R LLA+A +L+ EVHQM Sbjct: 605 KWKQALDNEYSAHIKNNTWT-LGNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIANQLDLEVHQM 701
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 92.8 bits (229), Expect = 7.550e-20 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 EW AM+ + + E N W+ +P R +GCRWVFAKK S+G + RYKARL AQG S+RP +D T+APV +R L+AL +L++ +HQM Sbjct: 387 EWKQAMETEYKSLEENKTWK-LCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILIALGVQLDWHMHQM 483
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A6S7J2R1_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J2R1_PARCT) HSP 1 Score: 89.7 bits (221), Expect = 1.140e-19 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 1 EWMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 +W A+ + +AH +N W ++P GR I CRWVF K +DG++ R+KARL A+G S+ LDY TF+PV +R LLA+A +L+ EVHQM Sbjct: 3 QWKQALDNEYSAHIKNNTWT-LGNLPEGRKAIDCRWVFRVKYNADGSVERHKARLVAKGYSQELGLDYDETFSPVAKYTSIRSLLAIANQLDLEVHQM 99
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A151U447_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U447_CAJCA) HSP 1 Score: 89.0 bits (219), Expect = 1.290e-19 Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 4 WMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 W A++ +L A +N W +S +P G+ IGC+WVF K SDG+I RYKARL A+G ++ +DY TF+PV+ +R LL++AA N+E+HQ+ Sbjct: 23 WKDAIERELTALSKNHPWTLTS-LPEGKKTIGCKWVFKVKHNSDGSIERYKARLVAKGFTQTVGIDYLETFSPVVKMTTIRVLLSIAANCNWELHQL 118
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A409WUQ4_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WUQ4_9AGAR) HSP 1 Score: 91.7 bits (226), Expect = 1.960e-19 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 4 WMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 W A+ E++ ERNG W G N +G +WVF K+ + G I+RYKARL AQG S+ P +DY TFAPV +R +LA+AA N+E+HQ+ Sbjct: 1054 WEKAILEEIGTLERNGTWVLEDEPSDGSNIVGSKWVFKIKKDASGNIVRYKARLVAQGFSQVPGVDYFDTFAPVARLSSIRAVLAIAAHRNWEIHQI 1150
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Match: A0A2G8RNC8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RNC8_9APHY) HSP 1 Score: 91.3 bits (225), Expect = 2.670e-19 Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 4 WMAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKARLAAQGSSERPRLDYGVTFAPVMSAGWMRYLLALAAELNFEVHQM 294 W AM+E++ A ++G WR H P G N + CRWVF K+ + G I RY ARL A+G S+ P D+ T+APV +R +LALAA L+ E+HQ+ Sbjct: 978 WEEAMKEEMEALSKHGTWR-LEHPPPGTNVVSCRWVFHAKKDASGNISRYHARLVARGFSQIPGTDFFDTYAPVAKTASIRTVLALAARLDLEIHQV 1073 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12711.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12711.1.1 >prot_P-wetherbeei_contig12711.1.1 ID=prot_P-wetherbeei_contig12711.1.1|Name=mRNA_P-wetherbeei_contig12711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MAAMQEKLAAHERNGVWRRSSHVPRGRNFIGCRWVFAKKRASDGTILRYKback to top mRNA from alignment at P-wetherbeei_contig12711:1511..1813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12711.1.1 ID=mRNA_P-wetherbeei_contig12711.1.1|Name=mRNA_P-wetherbeei_contig12711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig12711:1511..1813+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12711:1511..1813+ >mRNA_P-wetherbeei_contig12711.1.1 ID=mRNA_P-wetherbeei_contig12711.1.1|Name=mRNA_P-wetherbeei_contig12711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig12711:1511..1813+ (Phaeothamnion wetherbeei SAG_119_79)back to top |