mRNA_P-wetherbeei_contig1271.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1271.4.1
Unique NamemRNA_P-wetherbeei_contig1271.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A4D9D3P8_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3P8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.690e-66
Identity = 148/404 (36.63%), Postives = 194/404 (48.02%), Query Frame = 1
Query:  421 YDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFARAMG--------GYDSLARDRRSHRRRGGSRNGGDNKETA 1608
            YDVAV+DE Q++GD  RGWAWTR VLGL A E+HLCGSPAF+ + + LA  +GD++ V                                                                                                                                R Y RLSPL    +A+   + +  GDC+VAFSR++L  LK+++EVA+  R +C +VYGGLPP+ RREQARLFNE G SG++V+VA+DAIGMGLNL+I RVIFS LEKFDG+  R L   E+KQIAGRAGRF G F+ G V   + RD++ +   + A +E + AAGL P+ EQL+MFARA G         Y +   +RR++R   G R GG  +  A
Sbjct:   61 YDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEV--------------------------------------------------------------------------------------------------------------------------------REYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEG-SGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFKGKFEMGLVAGRESRDVSVIARALRAEDEPIRAAGLKPSREQLMMFARANGLRVRETVEDYAAAREERRTNR--AGRREGGQEEGAA 333          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A7S0GUC1_MICPS (RNA helicase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GUC1_MICPS)

HSP 1 Score: 208 bits (529), Expect = 1.990e-55
Identity = 135/372 (36.29%), Postives = 169/372 (45.43%), Query Frame = 1
Query:  403 APPRQIYDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFARA 1518
            A  R+  DVAVIDEA +LGD ARG+A+TRAVLGL AAE+HLCG PA + L   +A  +GD +VV R                                                                                                                                YERL PL      +  +  + PGDCLVAFSR+ +HRLK DVE  +G   R  V+YG LPP+ R  QA LFN+R  SG+DVL+ASDAIGMGLNLSI RV+F+ L+K+DG   R L P E KQIAGRAGRFG    +G  T M++ ++  LRD + AP  DL  A + PTL+Q+ +F  A
Sbjct:   82 ADVRKPIDVAVIDEAHLLGDPARGYAFTRAVLGLPAAELHLCGDPAMVPLIETIASELGDSLVVHR--------------------------------------------------------------------------------------------------------------------------------YERLQPLRVLSEPLRRVEDVKPGDCLVAFSRKAVHRLKKDVETQAG--RRACVIYGSLPPEARARQAELFNDRANSGYDVLIASDAIGMGLNLSIKRVVFTTLKKYDGSHLRALAPPEAKQIAGRAGRFGMGASEGGATTMRRDELRSLRDAVNAPVVDLTKASVAPTLDQIALFLEA 323          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: C1E841_MICCC (RNA helicase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E841_MICCC)

HSP 1 Score: 194 bits (494), Expect = 2.970e-52
Identity = 125/372 (33.60%), Postives = 166/372 (44.62%), Query Frame = 1
Query:  412 RQIYDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFARAMGG 1527
            R++ DVAV+DEA ++GD  RG+A+TRA+LG+ A E+HLCG PA + L +++ + +GD++ V R                                                                                                                                Y RL PL      +  +  +  GDCLVAFSR+ +H+LK DV   +G   R  V+YG LPP+ R  QA LFN+R T+G+DVL+ASDAIGMGLNLSI RV+F+ + KFDG   RLLEP EVKQIAGRAGRFG  F +G  T M    +  LR  +AAP  DL    + PTLE +  +  A+ G
Sbjct:   97 RRMVDVAVVDEAHLMGDPERGYAFTRAILGIPAKELHLCGDPAMVPLVQKVIEEVGDKLTVHR--------------------------------------------------------------------------------------------------------------------------------YTRLQPLKVLDTPLRSIKNVKSGDCLVAFSRKAVHQLKRDVVRQAG--LRACVIYGSLPPEARARQAELFNDRATTGYDVLIASDAIGMGLNLSIRRVVFTTMRKFDGEQMRLLEPPEVKQIAGRAGRFGQGFGEGGTTTMVAEQLPILRHAVAAPVVDLTRCSVAPTLEHVECYLEAVPG 338          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: W7T3K5_9STRA (RNA helicase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3K5_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.840e-52
Identity = 119/321 (37.07%), Postives = 150/321 (46.73%), Query Frame = 1
Query:  421 YDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPF 1383
            YDVAV+DE Q++GD  RGWAWTR VLGL A E+HLCGSPAF+ + + LA  +GD++ V                                                                                                                                R Y RLSPL    +A+   + +  GDC+VAFSR++L  LK+++EVA+  R +C +VYGGLPP+ RREQARLFNE G SG++V+VA+DAIGMGLNL+I RVIFS LEKFDG+  R L   E+KQIAGRAGRF G F
Sbjct:  201 YDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEV--------------------------------------------------------------------------------------------------------------------------------REYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEG-SGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF 392          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A4P9YZI2_9FUNG (RNA helicase n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YZI2_9FUNG)

HSP 1 Score: 189 bits (480), Expect = 6.110e-51
Identity = 123/370 (33.24%), Postives = 168/370 (45.41%), Query Frame = 1
Query:  406 PPRQIYDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAID-DLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFA 1512
            P  Q  +VAV+DE QM+ D +RGWAWT A+LGL A EIHLCG P  + L +R+ + + +E+ V                                                                                                                                  YERLSPL  + ++++ +L  +  GDC+V FSR  +  LK ++E+ +G   RCAV+YG LPP+ R EQARLFN+   SG+DVLVASDAIGMGLNL+I RVIF  +EKFDG+  R L+  +VKQIAGRAGRF   +  G  T +++ D+  L   MA P+++L +AGL PT+  +  FA
Sbjct:   94 PLNQKLEVAVVDEIQMIADPSRGWAWTHALLGLQAKEIHLCGEPTAIDLIKRICETLNEEVEV--------------------------------------------------------------------------------------------------------------------------------NEYERLSPLQLADKSLNGNLKNIRKGDCIVTFSREGIFGLKQEIEMQTG--YRCAVIYGALPPETRAEQARLFNDP-NSGYDVLVASDAIGMGLNLNIRRVIFETMEKFDGKAVRPLQTSQVKQIAGRAGRFQTAYAVGEATTLEKSDLPKLHRVMATPQDNLKSAGLQPTVSTIEQFA 332          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A7S0KS98_MICPS (RNA helicase (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KS98_MICPS)

HSP 1 Score: 197 bits (500), Expect = 6.320e-51
Identity = 126/375 (33.60%), Postives = 168/375 (44.80%), Query Frame = 1
Query:  403 APPRQIYDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFARAMGG 1527
            A  R++ DVAV+DEA ++GD  RG+A+TRA+LG+ A E+HLCG PA + L +++ + +GD++ V R                                                                                                                                Y RL PL    + +  +  +  GDCLVAFSR+ +H+LK DV   +G   R  V+YG LPP+ R  QA LFN+R T+G+DVL+ASDAIGMGLNLSI RV+F+ + KFDG   RLLEP EVKQIAGRAGRFG  F +G  T M    +  LR  +AAP  DL    + PTLE +  +  A+ G
Sbjct:  266 ADVRRMVDVAVVDEAHLMGDAERGYAFTRAILGIPAKELHLCGDPAMVPLVQKVIEEVGDKLTVHR--------------------------------------------------------------------------------------------------------------------------------YTRLQPLKVLDKPLRSIKNVRSGDCLVAFSRKAVHQLKRDVVRQAG--LRACVIYGSLPPEARARQAELFNDRATTGYDVLIASDAIGMGLNLSIRRVVFTTMRKFDGEQMRLLEPPEVKQIAGRAGRFGQGFGEGGTTTMVAEQLPILRHAVAAPVVDLTRCSIAPTLEHVECYLEAVPG 510          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A6G0X0Y1_9STRA (RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0Y1_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.910e-50
Identity = 126/373 (33.78%), Postives = 165/373 (44.24%), Query Frame = 1
Query:  421 YDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFARAMGGYDSL 1539
            YDVAV+DE QM+GD  RGWAWTRA+  L A EIH+CGS   + L +  A   GD+                                                                                                                            F L    ++YER SPL+     +   S +  GDC+V FSRRR+ ++K ++E+A+G   RC ++YG LPP+ R +QARLFNE   +GFDVLVASDAIGMGLNL+I R+I   + KFDG     + P  +KQIAGRAGR G  +  G  T + Q DM +L+D    P  +L AAGLFP+ EQ+V FA+ M G + L
Sbjct:  281 YDVAVVDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVELVKNFAQVGGDD----------------------------------------------------------------------------------------------------------------------------FDL----KTYERRSPLNIDATPLTSYSQVRKGDCIVGFSRRRIFQIKREIEIATG--MRCCIIYGQLPPETRSQQARLFNEP-DNGFDVLVASDAIGMGLNLNIGRIILDSVLKFDGADMVDITPSLIKQIAGRAGRSGSDYTYGLATTLNQNDMKYLKDSYHEPPRELKAAGLFPSSEQMVEFAKQMPGINDL 522          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A1U7ZVD4_NELNU (RNA helicase n=6 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZVD4_NELNU)

HSP 1 Score: 191 bits (484), Expect = 4.180e-50
Identity = 127/365 (34.79%), Postives = 167/365 (45.75%), Query Frame = 1
Query:  421 YDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFAR 1515
            Y  AVIDE QM+G   RG+++TRA+LGLAA E+HLCG  A + L + + +  GD ++ V+Y                                                                                                                               YERLSPL  S   +   S +  GDC+V FSRR ++RLK+D+E  +GG+  C+VVYG LPP+ R  QA +FN+  +S FDVLVASDAIGMGLNL+ISR+IFS L+KFDG   R L   E+KQIAGRAGRFG  F  G VTC+   D+  L   + +P  DL +AGLFPT + L +++R
Sbjct:  157 YHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGD-VIKVQY-------------------------------------------------------------------------------------------------------------------------------YERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDE-SSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSR 390          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A1Y1HM65_KLENI (RNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HM65_KLENI)

HSP 1 Score: 190 bits (482), Expect = 5.720e-50
Identity = 123/370 (33.24%), Postives = 165/370 (44.59%), Query Frame = 1
Query:  403 APPRQIYDVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFA 1512
            A   Q YD AV+DE QM+    RG+A+TRA+LGLA  E+H+CG PA + L  +     GDE+ V                                                                                                                                + YERLSPL +S +A+  L  +  GDC++AFSR +++ +K ++E  +  R RC VVYG LP + R  QA LFN+   SG+DVLVASDA+GMGLNL+I R+IFS + KFDG  RR+L   E KQIAGRAGRF   + +G VTC++ RD+  L+  +  P E +  AGLFPT +QL +FA
Sbjct:  137 ADTAQKYDAAVVDEIQMMASPDRGFAFTRALLGLATPELHVCGDPAAVPLVEQFCRETGDELQV--------------------------------------------------------------------------------------------------------------------------------KHYERLSPLKSSRQALGSLMEVRAGDCIIAFSRTQIYNIKKEIETKT--RHRCCVVYGSLPQETRSRQAALFNDE-DSGYDVLVASDAVGMGLNLNIRRIIFSSIYKFDGFERRMLTSSEAKQIAGRAGRFASQYPEGEVTCLEPRDLGALKYLLKQPPETITEAGLFPTFDQLQLFA 375          
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Match: A0A397V3I3_9GLOM (RNA helicase n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397V3I3_9GLOM)

HSP 1 Score: 187 bits (475), Expect = 1.180e-49
Identity = 119/364 (32.69%), Postives = 166/364 (45.60%), Query Frame = 1
Query:  424 DVAVIDEAQMLGDGARGWAWTRAVLGLAAAEIHLCGSPAFLSLARRLADAMGDEIVVVRYGRTMLWAKRERTLLQCLRCMACALTGFERS*MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRSHCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERLSPLHASHRAID-DLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVVYGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLEKFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMAAPEEDLAAAGLFPTLEQLVMFA 1512
            DVAVIDE QM+ D  RGWAWT+A+LGL A EIH+CG P+ + L + +  ++ ++I +                                                                                                                                R Y+RLS L  S +++D DL  +  GDC+V FSR+ +  LKH++E A+G   RCAV YG LPP+ R +QA+LFN+   SGFDVLVASDAIGMGLNL+I R++F  ++K+DG   R +   ++KQIAGRAGRFG     G VT ++  D+ ++   M AP ++L  AGL PT+E + +FA
Sbjct:  117 DVAVIDEIQMISDQQRGWAWTQALLGLQAKEIHICGEPSAVPLVKSICQSINEDIEI--------------------------------------------------------------------------------------------------------------------------------REYKRLSSLEISQKSLDGDLKKIKKGDCVVTFSRKSIFSLKHEIEAATG--LRCAVAYGSLPPETRSQQAKLFNDP-NSGFDVLVASDAIGMGLNLNIKRIVFESIKKYDGIGVRYIPIPQIKQIAGRAGRFGTENAVGEVTALETSDLKYVHQAMDAPHKNLEMAGLQPTMEMVELFA 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1271.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D3P8_9STRA2.690e-6636.63Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S0GUC1_MICPS1.990e-5536.29RNA helicase n=1 Tax=Micromonas pusilla TaxID=3883... [more]
C1E841_MICCC2.970e-5233.60RNA helicase (Fragment) n=1 Tax=Micromonas commoda... [more]
W7T3K5_9STRA3.840e-5237.07RNA helicase n=2 Tax=Nannochloropsis gaditana TaxI... [more]
A0A4P9YZI2_9FUNG6.110e-5133.24RNA helicase n=1 Tax=Syncephalis pseudoplumigaleat... [more]
A0A7S0KS98_MICPS6.320e-5133.60RNA helicase (Fragment) n=2 Tax=Micromonas pusilla... [more]
A0A6G0X0Y1_9STRA3.910e-5033.78RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A1U7ZVD4_NELNU4.180e-5034.79RNA helicase n=6 Tax=Nelumbo nucifera TaxID=4432 R... [more]
A0A1Y1HM65_KLENI5.720e-5033.24RNA helicase n=1 Tax=Klebsormidium nitens TaxID=10... [more]
A0A397V3I3_9GLOM1.180e-4932.69RNA helicase n=1 Tax=Gigaspora rosea TaxID=44941 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1271contigP-wetherbeei_contig1271:1889..5036 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4432.XP_010256127.1
PFAMsHelicase_C,SUV3_C
Model size1637
Max annot lvl35493|Streptophyta
KEGG koko:K17675
Hectar predicted targeting categorymitochondrion
GOsGO:0000177,GO:0000178,GO:0000957,GO:0000958,GO:0000959,GO:0000960,GO:0000962,GO:0000963,GO:0000965,GO:0001558,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003723,GO:0003724,GO:0003725,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006310,GO:0006325,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007005,GO:0007275,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009553,GO:0009555,GO:0009561,GO:0009628,GO:0009651,GO:0009653,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010928,GO:0010929,GO:0010941,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0023051,GO:0023056,GO:0030307,GO:0031123,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031974,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032989,GO:0032990,GO:0032991,GO:0034458,GO:0034641,GO:0034655,GO:0035945,GO:0035946,GO:0040008,GO:0042623,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043954,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045025,GO:0045927,GO:0045935,GO:0046483,GO:0046700,GO:0047484,GO:0048229,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0060548,GO:0065007,GO:0070013,GO:0070035,GO:0070584,GO:0070827,GO:0071025,GO:0071026,GO:0071103,GO:0071704,GO:0071840,GO:0080036,GO:0080038,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0098798,GO:0140053,GO:0140097,GO:0140098,GO:1901000,GO:1901002,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902584,GO:1905354,GO:2000070,GO:2000827
Exons6
Evalue1.88e-52
EggNOG OGsKOG0953@1|root,KOG0953@2759|Eukaryota,37IUQ@33090|Viridiplantae,3GE2Y@35493|Streptophyta
EC3.6.4.13
DescriptionATP-dependent RNA helicase
Cds size939
COG categoryA
BRITEko00000,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1271.4.1prot_P-wetherbeei_contig1271.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1271 1889..4046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.126317-CDS-P-wetherbeei_contig1271:1888..19731683185958.126317-CDS-P-wetherbeei_contig1271:1888..1973Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1271 1889..1973 -
1683185958.1386573-CDS-P-wetherbeei_contig1271:2262..23971683185958.1386573-CDS-P-wetherbeei_contig1271:2262..2397Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1271 2263..2397 -
1683185958.1473947-CDS-P-wetherbeei_contig1271:2752..28511683185958.1473947-CDS-P-wetherbeei_contig1271:2752..2851Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1271 2753..2851 -
1683185958.156628-CDS-P-wetherbeei_contig1271:3123..31931683185958.156628-CDS-P-wetherbeei_contig1271:3123..3193Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1271 3124..3193 -
1683185958.1652997-CDS-P-wetherbeei_contig1271:3496..40461683185958.1652997-CDS-P-wetherbeei_contig1271:3496..4046Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1271 3497..4046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.1795468-UTR-P-wetherbeei_contig1271:4046..41901683185958.1795468-UTR-P-wetherbeei_contig1271:4046..4190Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1271 4047..4190 -
1683185958.186778-UTR-P-wetherbeei_contig1271:4484..50361683185958.186778-UTR-P-wetherbeei_contig1271:4484..5036Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1271 4485..5036 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1271.4.1

>prot_P-wetherbeei_contig1271.4.1 ID=prot_P-wetherbeei_contig1271.4.1|Name=mRNA_P-wetherbeei_contig1271.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MQLRSFRNALVVRAQAVEVVNFNNSATAGCRRRPCCPWHGRHCHCRCCRS
HCPRLKLPSSPFLLRHPCPFSAPSSAASPSSPLSGPAFRLGPLRRSYERL
SPLHASHRAIDDLSALSPGDCLVAFSRRRLHRLKHDVEVASGGRTRCAVV
YGGLPPDVRREQARLFNERGTSGFDVLVASDAIGMGLNLSISRVIFSGLE
KFDGRCRRLLEPHEVKQIAGRAGRFGGPFDQGFVTCMQQRDMAHLRDGMA
APEEDLAAAGLFPTLEQLVMFARAMGGYDSLARDRRSHRRRGGSRNGGDN
KETARRPLRLSQV
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mRNA from alignment at P-wetherbeei_contig1271:1889..5036-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1271.4.1 ID=mRNA_P-wetherbeei_contig1271.4.1|Name=mRNA_P-wetherbeei_contig1271.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3148bp|location=Sequence derived from alignment at P-wetherbeei_contig1271:1889..5036- (Phaeothamnion wetherbeei SAG_119_79)
CAGGCCAGGAACAGACGGAAGTGGAGGACGCGGCGCACTCCTCCTGCACA ATCGAGATGGCCGACCTAAGCAAGGTGCCTGCTGCGAATATGGCAGGCAA AAGTGTGGTGATGGGGCGGCGGCGGCAGCGATCGCGGGAGCGGGAGCTGC GGCGGCGGCCGTGGGGAAGAGGGGCTTTATGGTTATGAGCCATCAATGGC GAAAACGGAAACCACTGGGCAATGGATCATCCCTTCTGTGCTACCTGTGC TCTTTTCATTAATACACTGAAGCAGCTTGCGACTGCTGCGGCTCATTTTT CCTTCCTGGAAGCGGAAGAGAAGGACTTCTTGCATTGCATTCTTATTCTC TCTCTAGTTCATTCTTACATTGTTCAGTTCTCCTCAACGTTTCCGTCGCT CCGCCCCTCCCCGGCAGATATACGACGTGGCGGTGATTGACGAGGCTCAG ATGCTCGGGGACGGGGCGCGCGGCTGGGCGTGGACACGCGCCGTATTGGG TCTCGCCGCTGCCGAAATACATCTCTGCGGCAGCCCGGCGTTCCTCTCCC TGGTGAGGAAGGGTGCAGCTAGTGGCAAGGGAGCAGCGACGCTTGCAGGT TTGGGATCTTATTTCTGTGTTGACGTTTAGCGCAGGTTTCTCTTTTCGAC CGTTAGGATCTGTTTCTCTGTTTCTTGGACGGGGGGGACAACAGCTGGCA TTTAAGCTGCTCTACACCAGGTTGTTTGTAATCACCAGGTTGCTGTGGTT CGATTGGGATACAGTCAGACAATCCCCTCTCCTGTCTGAATTGTTTCGTG ATCCTGATCATGGCGCACGGTTCCTTCTCTTTTCTTTCTCGTGCAGGCGA GGCGGCTTGCAGATGCTATGGGCGATGAGATTGTAGTAGTCCGGTACGGA CGAACGATGTTGTGGGCAAAAAGGGAGAGGACATTGTTGCAGTGTTTGCG TTGCATGGCTTGCGCCCTGACAGGATTTGAACGGAGCTGAATGCAGTTGC GCAGCTTTCGAAACGCTCTAGTGGTCCGAGCTCAAGCCGTCGAGGTCGTG AATTTCAACAACTCCGCCACTGCCGGATGCCGCCGCCGCCCCTGCTGCCC CTGGCATGGCCGCCACTGCCACTGCCGCTGCTGCCGCTCCCATTGTCCAC GACTGAAGCTACCGTCATCGCCATTCCTGCTCCGTCACCCCTGCCCTTTC TCCGCCCCTTCTTCCGCCGCTTCACCGTCCTCTCCACTGTCCGGCCCCGC CTTCCGCCTCGGTCCTCTCCGCCGCAGCTACGAGCGCCTGAGCCCGCTGC ACGCCTCCCACCGCGCCATTGATGACCTCTCTGCGCTGTCGCCCGGTGAT TGCCTCGTCGCCTTCTCGCGCCGACGACTCCACCGCCTCAAGCACGACGT CGAAGTCGCGTCAGGCGGGCGCACGCGCTGCGCCGTCGTGTACGGCGGGC TGCCGCCGGATGTGCGGCGGGAGCAGGCACGGCTGTTTAACGAGCGAGGC ACGTCGGGGTTCGACGTCCTGGTAGCGTCCGACGCCATCGGTGAGGAGGA AGGAGGGAGATGGCCGTAAGAGAGAAAGTTGGAGGGAAGAAGGAGAACGA AGCGCACAGATGGGACGATGCTGTTTCATGTGCTGGCGCGGGCTCCTGTG TCAGTTGCCGCCCCCATGGTTGCGCCGCCGCCATCGCCGCTATCACGTAT CACCGTTGCCAGTATACTGCTGCCGCCTTCGCAGCTACTACGGTACCGCT GCGGCTGCAAGGTGTCTCTGGGCTAGATATTCTTTGTGCGGTGTTCCCAC GGGAGAATTCTTTTGCGCCGACCTTCGGCCTCCGCCATAACAGGAATGGG TCTGAACCTCTCCATATCCCGAGTCATCTTTTCCGGCCTTGAGAAGTTTG ATGGGAGATGCAGGTGAGCTGCGGTTGCTACCAGAATCGCTTTGGCCAGC TTTCTGTTCGTTTTTCCTGGATCAACCGCCTTGTTAGGAAATTCAAGAAA CAGCTTCGAGGTTCTGATCCTTTTTCTTCCGCGGAGCGGCGTCTTCTTAC TGCGATTCGACTTAAACCGCCACCTGCAACCTGTTACCGATCCGCGTTTC CCACTGCCATCTACCCCCTCTCCCCCTGCTCTTTTTTGACCCGCCCCGCC GGTGGCGTTCATTTCATGCTGATGGCTTCCCGCAGACGACTGCTGGAGCC CCACGAGGTGAAGCAGATTGCAGGTCGGGCCGGCCGATTCGGCGGGCCCT TTGATCAGGGCTTCGTGACTTGCATGCAACAAAGGTGAGCGACGGCGGAG TATCATACCTTCCCCAGGCTTGGTTGTTACCGCCGCTCTAGGCATGTTCG CACGACTCGGTTTGATTCGAAACCCCATCACCTTATGGACGGCGATGGCC CCGATTCGGCCTGGCGCGCCCGCCGACTCTAAAACAGGCGCGCGCTAAGG ATTATCCGTCGCGGCAGTGCGTTTCGTCTCCTGCACACTCCTTGGCTGGT TACACAGCCGAATGATTGAGCTGGCCGCTAACTAGCCAGTCCAGTCTGCA GCCCTTGAACTGTACCCCTTCCCTCCGCACATGCCGCACCGCGGTCCCCG GCCCCGCGGTGCGCCGCCGCGACGCATAAACATACGCAGAGACATGGCGC ACCTGCGGGACGGCATGGCGGCGCCGGAGGAGGACCTGGCGGCGGCGGGA CTCTTTCCGACGCTCGAGCAGCTCGTGATGTTCGCCCGCGCCATGGGCGG CTACGATTCCCTCGCCCGCGACCGGTCAGTTTGTTTCATGGGTGCCTGGT GTGCCGGCCTGCCGGCCGGCGGCTGGGTGCCTGGCCCGGCTCGCGGTTCT GGTTGGCAGCCGTTTTGGTGCGGTTTGTCGGCCTTTGGCCTAGGCCGGCG GTTCGCCTCCTCTCTGGTTGGCAGTCGGCGGCTCCAAACTTATGTCTATT TCCGTCTTCCTGGCGGTATAGGACTGCTGCCGCTATTCATCGCGCGTGAC CCGTCCCTTCGCTTCTCTGCTGCTTCCACGGCGTGCACAAACACACCTGC GTGCGCGCTGCAGCCGCAGCCACCGCCGCCGGGGCGGAAGCCGAAACGGC GGTGACAATAAGGAGACGGCCCGGCGGCCGCTGCGGCTGTCGCAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1271:1889..5036-

>mRNA_P-wetherbeei_contig1271.4.1 ID=mRNA_P-wetherbeei_contig1271.4.1|Name=mRNA_P-wetherbeei_contig1271.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig1271:1889..5036- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGTTGCGCAGCTTTCGAAACGCTCTAGTGGTCCGAGCTCAAGCCGT
CGAGGTCGTGAATTTCAACAACTCCGCCACTGCCGGATGCCGCCGCCGCC
CCTGCTGCCCCTGGCATGGCCGCCACTGCCACTGCCGCTGCTGCCGCTCC
CATTGTCCACGACTGAAGCTACCGTCATCGCCATTCCTGCTCCGTCACCC
CTGCCCTTTCTCCGCCCCTTCTTCCGCCGCTTCACCGTCCTCTCCACTGT
CCGGCCCCGCCTTCCGCCTCGGTCCTCTCCGCCGCAGCTACGAGCGCCTG
AGCCCGCTGCACGCCTCCCACCGCGCCATTGATGACCTCTCTGCGCTGTC
GCCCGGTGATTGCCTCGTCGCCTTCTCGCGCCGACGACTCCACCGCCTCA
AGCACGACGTCGAAGTCGCGTCAGGCGGGCGCACGCGCTGCGCCGTCGTG
TACGGCGGGCTGCCGCCGGATGTGCGGCGGGAGCAGGCACGGCTGTTTAA
CGAGCGAGGCACGTCGGGGTTCGACGTCCTGGTAGCGTCCGACGCCATCG
GAATGGGTCTGAACCTCTCCATATCCCGAGTCATCTTTTCCGGCCTTGAG
AAGTTTGATGGGAGATGCAGACGACTGCTGGAGCCCCACGAGGTGAAGCA
GATTGCAGGTCGGGCCGGCCGATTCGGCGGGCCCTTTGATCAGGGCTTCG
TGACTTGCATGCAACAAAGAGACATGGCGCACCTGCGGGACGGCATGGCG
GCGCCGGAGGAGGACCTGGCGGCGGCGGGACTCTTTCCGACGCTCGAGCA
GCTCGTGATGTTCGCCCGCGCCATGGGCGGCTACGATTCCCTCGCCCGCG
ACCGCCGCAGCCACCGCCGCCGGGGCGGAAGCCGAAACGGCGGTGACAAT
AAGGAGACGGCCCGGCGGCCGCTGCGGCTGTCGCAGGTG
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