mRNA_P-wetherbeei_contig12688.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12688.1.1
Unique NamemRNA_P-wetherbeei_contig12688.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A7S1D6D5_CYCTE (Hypothetical protein (Fragment) n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6D5_CYCTE)

HSP 1 Score: 114 bits (285), Expect = 7.950e-29
Identity = 54/129 (41.86%), Postives = 80/129 (62.02%), Query Frame = 1
Query:   31 ADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFC---RNGVSVSSLAGKFMAFITNSSIAHKVYTNTDDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQ 408
            AD + Y +R+G + G  +  P +   + M++ PV FW  Q        +G+S ++L GKFM FIT+  +  +V+T    + L+AHPNAK+LFG  NLIYM  + HK+ RALL P ++S EAL +Y +AQ
Sbjct:  103 ADAITYYVRRGTMAGVPYTLPMVS-LISMLVHPVRFWAEQGSLAMESNDGMSSNNLVGKFMVFITDPQLCKEVFTGEGTYQLYAHPNAKWLFGANNLIYMSTEPHKRFRALLTPALFSNEALTLYARAQ 230          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A426X5X4_ENSVE (Uncharacterized protein n=3 Tax=Musaceae TaxID=4637 RepID=A0A426X5X4_ENSVE)

HSP 1 Score: 110 bits (275), Expect = 1.180e-25
Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   34 DVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQ 408
            + L+Y  +KG LPGP +V PF+G A+ M+++P  FWERQ    R+   GVS + L G+F+ F+ ++ ++HKV+ N   D F L  HP  K LFGE NLIYM    HK +R  + P  ++  AL+ Y+  Q
Sbjct:   41 EQLSYLRKKGSLPGPHFVVPFLGSAIPMILNPTQFWERQAALARDSGLGVSANFLVGRFIVFVRSTELSHKVFANVRPDAFHLIGHPFGKKLFGEHNLIYMFDQQHKDLRRRIAPN-FTPRALSTYIDIQ 169          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A2R6Q6Q0_ACTCC (Cytochrome P450 710A11 like n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q6Q0_ACTCC)

HSP 1 Score: 110 bits (274), Expect = 1.530e-25
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 1
Query:    1 LLSLIVCCALADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQ 408
            LLSL+        ++Y  +KG +PGP  V PFIG AV +V DP  FW+ Q D  R+   GVS + + GKF+ FI ++ I+H+V+ N   D F L  HP  K LFGE NLIYM    HK +R  + P  ++ +AL+ Y   Q
Sbjct:   16 LLSLVAVFLFYGQISYLKKKGPIPGPSLVLPFIGNAVSLVRDPTRFWDAQSDLARSSHLGVSANYIMGKFIVFIRSTEISHRVFANVRPDAFHLIGHPFGKKLFGEHNLIYMFGQDHKDLRRRIAPN-FTPKALSTYTSIQ 155          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A6I9QV07_ELAGV (cytochrome P450 710A11 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9QV07_ELAGV)

HSP 1 Score: 109 bits (273), Expect = 2.110e-25
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1
Query:   13 IVCCA----LADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTN--TDDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR 414
            I+CC     L + L+Y  +KG LPGP  + PF+G AV M+  P  FWERQ    ++   G+S   L G+F+ FI ++ ++HKV+ N  +D F L  HP  K LFGE NLIYM    HK +R  + P  ++  AL+ YL  Q R
Sbjct:   17 ILCCVVLLVLLEQLSYLRKKGTLPGPHLIVPFLGSAVPMIRHPTRFWERQAALAKSSGLGLSADYLVGRFILFIRSTELSHKVFANVRSDAFHLIGHPFGKKLFGEHNLIYMFDQQHKDLRRRIAPN-FTPRALSTYLDIQQR 158          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A6P5FM55_ANACO (cytochrome P450 710A1-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FM55_ANACO)

HSP 1 Score: 109 bits (272), Expect = 3.080e-25
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 1
Query:   28 LADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWE---RQIDFCRNGVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR 414
            LA+ L+Y  +KG+LPGP+ V PF+G AV M++DP  FW    R+ +    G+S   L G+F+ FI ++ ++HKV+ N   D F L  HP  K LFG+ NLIYM    HK +R  + P  ++  ALA Y   Q R
Sbjct:   38 LAEQLSYHWKKGRLPGPQLVVPFLGSAVPMILDPTRFWAEQARRAESSGQGLSADFLVGRFIVFIRSTELSHKVFANVRPDAFHLIGHPFGKKLFGDHNLIYMFDQAHKDLRRRIAPN-FTPRALATYAALQQR 170          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A8J5LH07_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LH07_ZINOF)

HSP 1 Score: 108 bits (270), Expect = 5.410e-25
Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
Query:   22 CALA-----DVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN-GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR 414
            CALA     + L+Y  +KG LPGP +V PF+G A+ M+++P  FW RQ    R+ GVS + L G+F+ F+ ++ ++HKV+ N   D F L  HP  K LFGE NLIY+    HK +R  + P  ++  AL+ Y+  Q R
Sbjct:   28 CALAFWFLWEQLSYLRKKGPLPGPHFVIPFLGSALPMILNPTAFWARQAALARDLGVSANFLVGRFVVFVRSTELSHKVFANVRPDAFHLIGHPFGKKLFGEHNLIYLFDQQHKDLRRRIAPN-FTPRALSTYVDIQQR 165          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A444DF58_ENSVE (Uncharacterized protein n=2 Tax=Musaceae TaxID=4637 RepID=A0A444DF58_ENSVE)

HSP 1 Score: 108 bits (270), Expect = 6.010e-25
Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 1
Query:    1 LLSLIVCCALADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR 414
            LL  +    L   L+Y  +KG LPGP +V PF+G A+ M+++P  FW+RQ    R    GVS + L G+F+ FI ++ ++HKV+ N   D F L  HP  K LFG+ NLIYM  + HK +R  + P  ++  AL+ Y+  Q R
Sbjct:   25 LLCAVALVVLLQQLSYLRKKGPLPGPTFVVPFLGTALPMILNPTRFWDRQAALARASGLGVSANFLVGRFIVFIRSTELSHKVFANVRPDAFHLIGHPFGKRLFGDHNLIYMFDEQHKDLRRRIAPN-FTPRALSTYVAVQQR 166          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A6I9RN63_ELAGV (cytochrome P450 710A11-like n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RN63_ELAGV)

HSP 1 Score: 108 bits (269), Expect = 7.700e-25
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1
Query:    1 LLSLIVCCALADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQ 408
            LL  +V   L + L+Y  +KG LPGP ++ PF+G AV MV++P  FW RQ    ++   G S   L G+F+ FI ++ ++HK++ N   D F L  HP  K LFGE NLIYM    HK +R  + P  ++  AL+ YL  Q
Sbjct:   22 LLCCLVLLVLLEQLSYLWKKGPLPGPHFIVPFLGSAVPMVINPTRFWNRQAALAKSSGLGFSADYLVGRFILFIRSTDLSHKIFANVRPDAFHLIGHPFGKKLFGEHNLIYMFDQQHKDLRRRIAPN-FTPRALSTYLAIQ 161          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A8J5KW58_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KW58_ZINOF)

HSP 1 Score: 108 bits (269), Expect = 7.910e-25
Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
Query:   22 CALA-----DVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN-GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR 414
            CALA     + L+Y  +KG LPGP +V PF+G A+ M+++P  FW +Q    R+ GVS + L G+F+ F+ ++ ++HKV+ N   D F L  HP  K LFGE NLIYM    HK +R  + P  ++  AL+ Y+  Q R
Sbjct:   28 CALAFWFLWEQLSYLRKKGPLPGPLFVVPFLGSALPMILNPTGFWSQQATVARDLGVSANFLVGRFIVFVRSTELSHKVFANVRPDAFHLVGHPFGKKLFGEHNLIYMFDQKHKDLRRRIAPN-FTPRALSTYIDIQQR 165          
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Match: A0A803LU37_CHEQI (Uncharacterized protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LU37_CHEQI)

HSP 1 Score: 107 bits (266), Expect = 1.730e-24
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 1
Query:    1 LLSLIVCCALADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQIDFCRN---GVSVSSLAGKFMAFITNSSIAHKVYTNT--DDFILFAHPNAKYLFGEENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQ 408
            L +L+    L + + Y  +K +LPGP  V PF+G  V +V DP  FW+ Q D+ ++   G+SV+ + GKF+ FI NS ++HK++ N   + F L  HP  K LFGE N+IY+    HK +R  + P  ++ +ALA Y   Q
Sbjct:   20 LATLLASIILIEQIVYLRKKSRLPGPTLVLPFLGNVVGLVRDPEKFWDEQADYAKSTPLGISVNYIIGKFIVFIRNSEMSHKIFANVRPNAFQLVGHPFGKKLFGEHNMIYLYGQEHKDLRRRIAPN-FTPKALATYSNIQ 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12688.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1D6D5_CYCTE7.950e-2941.86Hypothetical protein (Fragment) n=2 Tax=Cyclophora... [more]
A0A426X5X4_ENSVE1.180e-2542.31Uncharacterized protein n=3 Tax=Musaceae TaxID=463... [more]
A0A2R6Q6Q0_ACTCC1.530e-2542.55Cytochrome P450 710A11 like n=2 Tax=Actinidia TaxI... [more]
A0A6I9QV07_ELAGV2.110e-2541.96cytochrome P450 710A11 n=1 Tax=Elaeis guineensis v... [more]
A0A6P5FM55_ANACO3.080e-2542.54cytochrome P450 710A1-like n=2 Tax=Ananas comosus ... [more]
A0A8J5LH07_ZINOF5.410e-2541.73Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A444DF58_ENSVE6.010e-2540.56Uncharacterized protein n=2 Tax=Musaceae TaxID=463... [more]
A0A6I9RN63_ELAGV7.700e-2541.13cytochrome P450 710A11-like n=4 Tax=Arecaceae TaxI... [more]
A0A8J5KW58_ZINOF7.910e-2541.73Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A803LU37_CHEQI1.730e-2439.01Uncharacterized protein n=4 Tax=Chenopodium quinoa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12688contigP-wetherbeei_contig12688:791..1755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog42345.XP_008783936.1
PFAMsp450
Model size414
Max annot lvl35493|Streptophyta
KEGG rclassRC01886
KEGG koko:K09832
KEGG ReactionR07489,R11097
KEGG Pathwayko00100,ko01100,ko01110,map00100,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0000249,GO:0003674,GO:0003824,GO:0006629,GO:0006694,GO:0008150,GO:0008152,GO:0008202,GO:0008610,GO:0009058,GO:0016125,GO:0016126,GO:0016491,GO:0016705,GO:0016717,GO:0044238,GO:0055114,GO:0070704,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617
Exons3
Evalue9.71e-27
EggNOG OGsCOG2124@1|root,KOG0157@2759|Eukaryota,37JNT@33090|Viridiplantae,3G90U@35493|Streptophyta,3KRP1@4447|Liliopsida
EC1.14.19.41
DescriptionBelongs to the cytochrome P450 family
Cds size414
COG categoryQ
BRITEko00000,ko00001,ko00199,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.7639449-CDS-P-wetherbeei_contig12688:790..10271683185956.7639449-CDS-P-wetherbeei_contig12688:790..1027Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12688 791..1027 +
1683185956.7743728-CDS-P-wetherbeei_contig12688:1324..14011683185956.7743728-CDS-P-wetherbeei_contig12688:1324..1401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12688 1325..1401 +
1683185956.7856019-CDS-P-wetherbeei_contig12688:1655..17551683185956.7856019-CDS-P-wetherbeei_contig12688:1655..1755Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12688 1656..1755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12688.1.1prot_P-wetherbeei_contig12688.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12688 791..1755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12688.1.1

>prot_P-wetherbeei_contig12688.1.1 ID=prot_P-wetherbeei_contig12688.1.1|Name=mRNA_P-wetherbeei_contig12688.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
LLSLIVCCALADVLAYRIRKGKLPGPKWVTPFIGGAVEMVMDPVPFWERQ
IDFCRNGVSVSSLAGKFMAFITNSSIAHKVYTNTDDFILFAHPNAKYLFG
EENLIYMDADVHKKVRALLIPGIYSKEALAMYLKAQVR
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mRNA from alignment at P-wetherbeei_contig12688:791..1755+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12688.1.1 ID=mRNA_P-wetherbeei_contig12688.1.1|Name=mRNA_P-wetherbeei_contig12688.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=965bp|location=Sequence derived from alignment at P-wetherbeei_contig12688:791..1755+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTAAGCCTCATCGTATGCTGCGCTCTCGCCGACGTTCTGGCGTACCG TATAAGGAAAGGCAAGCTTCCTGGTCCAAAATGGGTAACACCATTCATCG GTGGAGCTGTGGAGATGGTGATGGACCCGGTGCCGTTCTGGGAGAGGCAG ATCGACTTCTGCCGCAACGGGGTCTCCGTTAGCAGCCTGGCTGGCAAATT CATGGCGTTCATCACCAATTCTTCCATCGCCCACAAGGTGAGCTGTAACT CCCGCAATCGCTCTGGCGTAGTTTTTGTGTTGTATCTTTGTGTGCTGGTC GGCTATGGGCTGTCAGACTGGCAATGACTGAGTACAATGTTTGATTCCAA GTACAACTTCGCAAACGGCCGCTGCCTGGTTCTTTTGAAAACGGCCGGGG TTACGAATACCATTAAAGTGGCGTTTACAGCACGCATGAATGCATTTTTA ACAGATACGCGCTGTCTATGCCAGCTGTCGTGAAAGAACAATCCGAGAGA AAGTAAGAACCGGATTCGACTGCGTTGCCCACAGGTTTACACGAATACAG ACGATTTCATTTTGTTTGCTCATCCGAACGCCAAGTACCTCTTCGGAGAG GAAAATCTTATGTGAGTCTGCTGGGAAGGCCATCCGAATGTTCCCCCGTT GTCTCCCATTACGTCTTGCTTTGTGATGGCGATACTTTCATTGCAGCAGA AGAGCTCGCTGCTGTGGGTCTGGAGCCGCAGTGCGAAGCCGTGCCGTTCT CCCTTTCGACCGTTCTGTCCTCTGATGCTTTGAACTACGGCGCACGATTC CGTAAAGGCATTATGGTCCCCCCCCACGCCGCCATCCGCCGTCGCTTTCT TCCCCACTGATCCAGCTACATGGACGCCGATGTCCACAAAAAGGTGCGGG CGCTGCTCATTCCCGGCATCTACAGCAAGGAAGCGCTCGCCATGTACCTC AAGGCGCAGGTGCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12688:791..1755+

>mRNA_P-wetherbeei_contig12688.1.1 ID=mRNA_P-wetherbeei_contig12688.1.1|Name=mRNA_P-wetherbeei_contig12688.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig12688:791..1755+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTAAGCCTCATCGTATGCTGCGCTCTCGCCGACGTTCTGGCGTACCG
TATAAGGAAAGGCAAGCTTCCTGGTCCAAAATGGGTAACACCATTCATCG
GTGGAGCTGTGGAGATGGTGATGGACCCGGTGCCGTTCTGGGAGAGGCAG
ATCGACTTCTGCCGCAACGGGGTCTCCGTTAGCAGCCTGGCTGGCAAATT
CATGGCGTTCATCACCAATTCTTCCATCGCCCACAAGGTTTACACGAATA
CAGACGATTTCATTTTGTTTGCTCATCCGAACGCCAAGTACCTCTTCGGA
GAGGAAAATCTTATCTACATGGACGCCGATGTCCACAAAAAGGTGCGGGC
GCTGCTCATTCCCGGCATCTACAGCAAGGAAGCGCTCGCCATGTACCTCA
AGGCGCAGGTGCGA
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