mRNA_P-wetherbeei_contig12686.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12686.1.1
Unique NamemRNA_P-wetherbeei_contig12686.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA)

HSP 1 Score: 348 bits (894), Expect = 1.630e-111
Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            P +V+ VL+ LN +A+Y+DTINTIPF VIVKM  IWLFV+ PLAV G +FGRHWGGK SFPCRVNSI RPIP GPWYT P  V+PLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVY IL+VV+VC TIVAVYFVLNAEN+ WQW++F A+GSTAGYVF+YS+YYF+F+T+MFGFLQ +FYFGYM LFC+ LFVLCGT+G+ G++VFVK IY+NIKVD
Sbjct:  378 PALVITVLSFLNTVAVYYDTINTIPFMVIVKMALIWLFVAFPLAVVGCMFGRHWGGKASFPCRVNSIARPIPPGPWYTRPAAVIPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYAILSVVLVCATIVAVYFVLNAENYHWQWISFLASGSTAGYVFLYSIYYFYFKTEMFGFLQISFYFGYMGLFCVALFVLCGTIGLAGSSVFVKQIYKNIKVD 600          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK)

HSP 1 Score: 333 bits (855), Expect = 1.360e-107
Identity = 160/223 (71.75%), Postives = 191/223 (85.65%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            PT +   ++ LN +A Y+DT NTIPFGVI+KMFAIW+FVS PLAV+GT+FGRHWGG+  FPCRVN+ PRPIP G WYT P V +PLTGILPFGSIFIEMYF+FTSFWNYKFYYVYGFMLLVY+ILAVV +CT +VA YFVLNAEN+ WQW++F A+GST+GYVF+YS+YYF F+TQM GFLQ +FYFGYM +FC  LF+L GT+G  GA+ FV+AIYRN+KVD
Sbjct:  227 PTALALAVSALNAVAAYYDTTNTIPFGVILKMFAIWVFVSFPLAVSGTMFGRHWGGRADFPCRVNTFPRPIPLGKWYTKPWVFIPLTGILPFGSIFIEMYFVFTSFWNYKFYYVYGFMLLVYMILAVVTMCTAVVATYFVLNAENYHWQWISFTASGSTSGYVFLYSIYYFLFKTQMSGFLQISFYFGYMAIFCFGLFLLTGTIGHFGASKFVRAIYRNVKVD 449          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7R9U3Y7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Y7_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.370e-97
Identity = 156/225 (69.33%), Postives = 186/225 (82.67%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIP-AGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNY-KFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            P V+V V++ LN+IA+ + T N + F V+  +F IW+F+S PLAV GTLFGRHWGGKN+FPCRVN+ PR +P A PWY     V+P TG+LPFGSIFIEMYFIFTSFWNY KFYYVYGFMLLVYLIL VV +CTT+VAVYFVLNAENH+WQWL+F AAGSTA YVF Y+VYYF+F+T M GFLQ AFYFGYM++FCI L++LCGT+GV G+  FV+ IY NIKVD
Sbjct:  250 PGVIVGVVSFLNIIAMSYSTSNVLSFTVVANLFLIWIFISFPLAVIGTLFGRHWGGKNTFPCRVNTYPRDLPEATPWYAKWYFVIPATGLLPFGSIFIEMYFIFTSFWNYNKFYYVYGFMLLVYLILMVVTICTTVVAVYFVLNAENHKWQWLSFNAAGSTAVYVFAYAVYYFYFKTSMKGFLQVAFYFGYMSVFCIGLYILCGTVGVAGSMAFVRTIYMNIKVD 474          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA)

HSP 1 Score: 308 bits (790), Expect = 5.730e-96
Identity = 153/223 (68.61%), Postives = 182/223 (81.61%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            P +V+ V+ GLN+IA Y+DT + +    I K+FAIWLFVSLPL V GTLFGRHW GK  FPCR+NS+ RPIP GPWYTHP ++  +TGILPFGSIFIEMYFIFTSFWNYKFYYVY F+LLVYLIL VV +CTTIVAVYF+LN EN+ WQWL+F A+GSTAGYVF+YS+YYF  +TQM G LQ AFYFGY  +FC  LF+LCG LGVIG ++FV+ IY  +K+D
Sbjct:  379 PVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A6U4JKR6_9STRA (Transmembrane 9 superfamily member n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKR6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.320e-93
Identity = 148/219 (67.58%), Postives = 182/219 (83.11%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIP-AGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYR 654
            P ++V +++ LNM+A+Y+ T N + F V++K+  IW+F+S PLAV GTLFGRHWGGKN+FPCRVN+ PR +P A PW+     V+P TG+LPFGSIFIEMYFIFTSFWNYKFYYVYG ML+VYLIL VV VCTT+VAVYFVLNAENH+WQWL+F AAGSTA YVF Y+VYY++F+T M GFLQ+AFYFGY T+FC+ LF+LCGT+G  GA  FVK I+R
Sbjct:  403 PCIIVGIVSCLNMVAMYYQTSNVLSFTVLLKLMGIWMFISFPLAVLGTLFGRHWGGKNTFPCRVNTYPRDLPEAAPWFAQWYFVIPATGLLPFGSIFIEMYFIFTSFWNYKFYYVYGLMLVVYLILTVVTVCTTVVAVYFVLNAENHKWQWLSFNAAGSTAFYVFCYAVYYYYFKTNMQGFLQWAFYFGYTTVFCVGLFILCGTVGSAGAMTFVKTIFR 621          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: D8LEX9_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX9_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 1.030e-89
Identity = 143/223 (64.13%), Postives = 173/223 (77.58%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            P+V+  V+  LN++A++++T+NTIPF  ++KM  IW+FVS PL VAG++FGRHWGGK +FPCRVNSIPRPIP   WY  P VVVPL GILPFGSIFIEMYFI TS W   +YYVYGF+LLV+ IL VV+VCTTIVAVYFVLN EN+ WQW++F +A STAGYVF+YS YY +F+T   GF+Q +FYFGYM LFC             G+TVFVK IYRNIKVD
Sbjct:    9 PSVLFPVVFLLNLVAMHYNTVNTIPFMAVLKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYLQPNVVVPLAGILPFGSIFIEMYFILTSLWANMYYYVYGFVLLVFAILVVVLVCTTIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSGYYLWFKTHQSGFMQISFYFGYMGLFCAAXXXXXXXXXXXGSTVFVKQIYRNIKVD 231          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 4.200e-87
Identity = 143/223 (64.13%), Postives = 176/223 (78.92%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            P+++  V+  LN++A++++T+NTIPF  + KM  IW+FVS PL VAG++FGRHWGGK +FPCRVNSIPRPIP   WY+ P VVVPL GILPFGSIFIEMYFI  S W YK+YYVYGF+LLV+ IL VV+VCT+IVAVYFVLN EN+ WQW++F +A STAGYVF+YS YY +F+T+  GF+Q +FYFGYM LFC  L          G+TVFVK IYRNIKVD
Sbjct:  388 PSILFPVVFVLNLVAMHYNTVNTIPFMAVFKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYSQPNVVVPLAGILPFGSIFIEMYFILASLWAYKYYYVYGFVLLVFAILVVVLVCTSIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSAYYLWFKTRQSGFIQISFYFGYMGLFCAALXXXXXXXXXXGSTVFVKQIYRNIKVD 610          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A5D6XY69_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY69_9STRA)

HSP 1 Score: 276 bits (706), Expect = 2.160e-83
Identity = 139/223 (62.33%), Postives = 168/223 (75.34%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            PTV+   +  +N +A+ + T   IPF  IV++  +W FVS PLAV GT+ GRH   K+ FPCRVN  PR IP   WY  P V++ LTGILPFGSIFIEMYFIF SFW+YKFYYVYGFMLLV LIL  V +C TIV  YF+LNAEN+RW W +FAAAGSTAGYVFVY+VY++FF+T M GFLQ  FYFGYM LFC   F++CGT+G +G++VF K IYRNIK +
Sbjct:  389 PTVIFVAVFFINALAVAYGTTYAIPFVTIVQVVLVWFFVSCPLAVLGTILGRHGAAKSGFPCRVNKFPREIPEARWYLRPPVLILLTGILPFGSIFIEMYFIFASFWSYKFYYVYGFMLLVVLILGTVTLCVTIVCTYFLLNAENYRWHWTSFAAAGSTAGYVFVYAVYFYFFKTNMSGFLQTCFYFGYMGLFCFAFFIMCGTIGYLGSSVFTKRIYRNIKCE 611          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: H3G842_PHYRM (Transmembrane 9 superfamily member n=37 Tax=Peronosporaceae TaxID=4777 RepID=H3G842_PHYRM)

HSP 1 Score: 274 bits (700), Expect = 7.490e-83
Identity = 134/223 (60.09%), Postives = 168/223 (75.34%), Query Frame = 1
Query:    1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            PTV    +  +N +A+++ T   IPF  IV++  +W FVS PLAV GT+ GRH   K  FPCRVN  PR +P   WY  P V++ LTG+LPFGSIFIEMYFIF SFWNYKFYYVYGFMLLV++IL +V +C TIV  YF+LNAEN+RW W +FAAAGSTA YVF+Y++Y++FF+T M GFLQ  FYFGYM LFC   F++CGT+G +G++VF K IYRNIK +
Sbjct:  356 PTVTFVSVFFINALAVFYGTTYAIPFVTIVQVVLVWFFVSCPLAVLGTILGRHGAAKAGFPCRVNKFPREVPEARWYLRPPVLIALTGVLPFGSIFIEMYFIFASFWNYKFYYVYGFMLLVFIILTIVTLCVTIVCTYFLLNAENYRWHWTSFAAAGSTALYVFIYAIYFYFFKTNMSGFLQTCFYFGYMGLFCFAFFIMCGTVGYLGSSVFTKRIYRNIKCE 578          
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7S3M571_9STRA (Transmembrane 9 superfamily member n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M571_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.270e-82
Identity = 125/180 (69.44%), Postives = 150/180 (83.33%), Query Frame = 1
Query:  130 AVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669
            AV GT+FGRHW GK   PCRVNSIPRPIP G WYT P  V+P  GILPFGSIFIEMYFIFT+FW+YKFYYVYGFMLLVY IL +V +CTT+VAVYF+LNAEN+ WQW+A  +AGST+ YVF+YS++YF+++TQM G LQ ++YFGYM LFCI LF +CG LGV GA +FV  IY+N+K+D
Sbjct:    1 AVVGTIFGRHWMGKYEPPCRVNSIPRPIPVGAWYTSPSFVIPAAGILPFGSIFIEMYFIFTAFWSYKFYYVYGFMLLVYTILTLVTICTTVVAVYFILNAENYNWQWIALGSAGSTSFYVFLYSIFYFYYKTQMSGLLQVSYYFGYMALFCIGLFFICGALGVWGANIFVHKIYKNVKID 180          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQT7_9STRA1.630e-11176.68Transmembrane 9 superfamily member n=1 Tax=Tribone... [more]
A0A7S4DBZ3_HETAK1.360e-10771.75Transmembrane 9 superfamily member n=1 Tax=Heteros... [more]
A0A7R9U3Y7_9STRA3.370e-9769.33Transmembrane 9 superfamily member n=1 Tax=Pinguio... [more]
W7TF26_9STRA5.730e-9668.61Transmembrane 9 superfamily member n=2 Tax=Monodop... [more]
A0A6U4JKR6_9STRA1.320e-9367.58Transmembrane 9 superfamily member n=6 Tax=Phaeomo... [more]
D8LEX9_ECTSI1.030e-8964.13Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
A0A6H5KXN7_9PHAE4.200e-8764.13Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
A0A5D6XY69_9STRA2.160e-8362.33Transmembrane 9 superfamily member n=1 Tax=Pythium... [more]
H3G842_PHYRM7.490e-8360.09Transmembrane 9 superfamily member n=37 Tax=Perono... [more]
A0A7S3M571_9STRA1.270e-8269.44Transmembrane 9 superfamily member n=1 Tax=Spumell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12686contigP-wetherbeei_contig12686:119..1951 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEX9
Preferred nameTM9SF3
PFAMsEMP70
Model size1257
Max annot lvl2759|Eukaryota
KEGG koko:K02639,ko:K17087
KEGG Pathwayko00195,map00195
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005795,GO:0005797,GO:0005801,GO:0005802,GO:0012505,GO:0016020,GO:0016021,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0097708,GO:0098791
Exons3
Evalue2.13e-91
EggNOG OGsKOG1278@1|root,KOG1277@2759|Eukaryota
Ec32 ortholog descriptionNonaspanin (TM9SF)
Ec32 orthologEc-21_005970.1
Descriptionsecretion of lysosomal enzymes
Cds size636
COG categoryI
BRITEko00000,ko00001,ko00194,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.702013-UTR-P-wetherbeei_contig12686:118..7031683185956.702013-UTR-P-wetherbeei_contig12686:118..703Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12686 119..703 -
1683185956.7377152-UTR-P-wetherbeei_contig12686:1915..19511683185956.7377152-UTR-P-wetherbeei_contig12686:1915..1951Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12686 1916..1951 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.7133396-CDS-P-wetherbeei_contig12686:703..8061683185956.7133396-CDS-P-wetherbeei_contig12686:703..806Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12686 704..806 -
1683185956.7235873-CDS-P-wetherbeei_contig12686:1061..14031683185956.7235873-CDS-P-wetherbeei_contig12686:1061..1403Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12686 1062..1403 -
1683185956.7308927-CDS-P-wetherbeei_contig12686:1724..19151683185956.7308927-CDS-P-wetherbeei_contig12686:1724..1915Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12686 1725..1915 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12686.1.1prot_P-wetherbeei_contig12686.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12686 704..1915 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12686.1.1

>prot_P-wetherbeei_contig12686.1.1 ID=prot_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp
MIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPC
RVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFY
YVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGY
VFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVF
VKAIYRNIKVD*
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mRNA from alignment at P-wetherbeei_contig12686:119..1951-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12686.1.1 ID=mRNA_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1833bp|location=Sequence derived from alignment at P-wetherbeei_contig12686:119..1951- (Phaeothamnion wetherbeei SAG_119_79)
CCCACTGTGGTGGTGGCCGTCCTGGCCGGGCTCAACATGATCGCGCTTTA CCATGACACTATCAACACCATTCCCTTCGGCGTCATCGTCAAGATGTTTG CGATCTGGCTCTTTGTGTCGCTGCCGCTGGCCGTGGCGGGCACGCTCTTT GGGCGGCACTGGGGCGGCAAGAACAGCTTCCCATGCCGCGTGAACAGCAT ACCGCGGCCGATCCCGGCGGGCCCGTGGTAAGCGAGCTGTTTTTGCCTTT GTACGCGGCGGTGGATGTTGGGGCAGGAGGAGGTACCTTTTTGCATTCGT GGCGGCGTTCGTTCAGTTCTGCAGCATGCTTTTGTGGTGAGAAGTTGCCA GCGGATGCGCAATTAAAGTTTTTTTATAGAAGTGGAAAGGCTTCGCGATG TGTGGCTGTCGGTCTTGTGGAATAGGAGGCTGTTTGTCCACTTATCAAGT TCTTTGGTTTCATAAACCGCTGCACTTAATGCACGCTTCCTTGCCCTTTC TGTAATGGCGGTGGGCCGCGGCGGCCGGCTGCTACTTTGGAAATCCAGGT ACACGCACCCACTGGTGGTGGTGCCGCTCACGGGTATCCTGCCATTTGGC AGCATCTTCATCGAGATGTACTTCATCTTCACCTCCTTCTGGAACTACAA GTTCTACTACGTCTACGGCTTTATGCTGCTCGTCTACCTAATTTTGGCGG TCGTCGTCGTCTGCACGACCATCGTCGCCGTCTACTTCGTTCTCAATGCC GAGAACCACCGCTGGCAGTGGCTGGCCTTCGCGGCGGCCGGGTCGACGGC CGGCTACGTGTTCGTCTATTCGGTCTACTACTTTTTCTTCCGAACGCAGA TGTTCGGTTTCCTGCAGTTCGCCTTCTACTTCGGGTACATGTGAGTGCCG GCTGGAATCTGTTTGGGCTGGCTCGATTTTATTTGGTAGCAGGTGGGGGA AGAGATAGGGATGGAAAAAGTGGAGCTCGCGGAAAGAGGAGTTGAACGGA GCTTCGACAAGTTTTTTTTGGTGAGGACAACAGGGAAGGGGTTGACTGTT CAACCCCAGAGGTGGCAAAGATGCAAAATGAGACACGTTGAGATGTCGAC ACATACGTAACGCAACCAAGGTAACCCTTTCTCTCTGTTCTATAGGACGC TCTTCTGCATCATGCTATTCGTCTTGTGCGGGACTTTGGGCGTCATCGGT GCCACGGTCTTCGTCAAGGCCATCTACCGCAACATCAAGGTCGACTAGCG ACGAAATGAATGCAGCAGATGCAGCACACTCCAATAGCGGCGGCGGCGGC GGCGCAAGCGCCGGCACCGGCGGCGGGTGGTAACAGCGGCGGGCAGCTGA TAAGTGGCTGGACGGTCGCTGCGGCCTACGGTCGGCGGCTTCGCAAAATC GGATGGACCTTCGCGGCGAGTCGCAGCAAAACTGACCAGCGGAAAAAGGA TGATGGCTTGCAGCCTCCAAAGGTGACGCCGTTGCTGCATAAAACGACCC AGGCGACAGTGGCATTAATGGTGGCGGCGGATGCGGCGGCGGTCCAAGCG TCGGGCGTGTCGGGTGCGGCGGCCATCGCCGCCACAACTTCCCCCGGTTA CGGGCAGGTACGTGTTGCGCCAGCACGCATGCAGCGGACGACAAATGACC GAGCGGCCCACGTCGACTGCTCGAAGCGGCAGGTATCTGGACCAGCCGTG TCACAGAAGCGACAGTGACTGGCGGAAGCCCAAATTTTGTCCGCCGGCGG CGATGCAATGCCGGCGGGCATTGTCAGGATGGAAATAATAGACACAACGG ACCTTTGAAGGGTCAGGAAAATGTATTTCGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12686:119..1951-

>mRNA_P-wetherbeei_contig12686.1.1 ID=mRNA_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig12686:119..1951- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGCGCTTTACCATGACACTATCAACACCATTCCCTTCGGCGTCAT
CGTCAAGATGTTTGCGATCTGGCTCTTTGTGTCGCTGCCGCTGGCCGTGG
CGGGCACGCTCTTTGGGCGGCACTGGGGCGGCAAGAACAGCTTCCCATGC
CGCGTGAACAGCATACCGCGGCCGATCCCGGCGGGCCCGTGGTACACGCA
CCCACTGGTGGTGGTGCCGCTCACGGGTATCCTGCCATTTGGCAGCATCT
TCATCGAGATGTACTTCATCTTCACCTCCTTCTGGAACTACAAGTTCTAC
TACGTCTACGGCTTTATGCTGCTCGTCTACCTAATTTTGGCGGTCGTCGT
CGTCTGCACGACCATCGTCGCCGTCTACTTCGTTCTCAATGCCGAGAACC
ACCGCTGGCAGTGGCTGGCCTTCGCGGCGGCCGGGTCGACGGCCGGCTAC
GTGTTCGTCTATTCGGTCTACTACTTTTTCTTCCGAACGCAGATGTTCGG
TTTCCTGCAGTTCGCCTTCTACTTCGGGTACATGACGCTCTTCTGCATCA
TGCTATTCGTCTTGTGCGGGACTTTGGGCGTCATCGGTGCCACGGTCTTC
GTCAAGGCCATCTACCGCAACATCAAGGTCGACTAG
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