mRNA_P-wetherbeei_contig12674.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12674.1.1
Unique NamemRNA_P-wetherbeei_contig12674.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A6H5KJC8_9PHAE (DUF5745 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 2.920e-40
Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:    1 DAMTNVAEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD--DLDLSHITGEAIVRGD 300
            D+  + A EE  ILASINTLL+RVGISAKPI SFEELRKSASSMFVAIFEAMF +R  G+VR+PA V +YVHNAQ+VVDALA    ++DLSHITGEAIVRGD
Sbjct:   10 DSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGD 111
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BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: D7FJ17_ECTSI (DUF5745 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ17_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 3.650e-37
Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:    1 DAMTNVAEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD--DLDLSHITGEAIVRGD 300
            D+  + A EE  ILASINTLL+RVGISAKPI SFEELRKSASSMFVAIFEAMF +R  G+VR+PA V +YVHNAQ+VVDALA    ++DLSHITGEAIVRGD
Sbjct:   10 DSSLDEATEEGFILASINTLLNRVGISAKPINSFEELRKSASSMFVAIFEAMFQVRQRGVVRKPAHVHNYVHNAQMVVDALAGPILNMDLSHITGEAIVRGD 111
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BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A835Z720_9STRA (DUF5745 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z720_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.660e-29
Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 1 
Query:   19 AEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASDDL--DLSHITGEAIVRGD 300
            A E++ +L  INTLL RVGI AKPI SF E++KSASSMFVAIFE MF +   GIVR+P ++ DYV NAQ+++DAL  + L  +L H+TG A+ RGD
Sbjct:    6 AAEDEVLLRKINTLLTRVGIPAKPITSFNEVKKSASSMFVAIFEGMFKVTREGIVRKPTQLQDYVRNAQVIIDALDKEILHINLDHVTGAAVARGD 101
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BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A7S4DH09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH09_HETAK)

HSP 1 Score: 107 bits (267), Expect = 6.670e-27
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:   25 EEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASDDL--DLSHITGEAIVRGD 300
            EE  I+A+ N LL  VGI AKPI SF+EL++ ASSMFVA+FEAMF +R+ GI+R P   SDYVHNAQ+V+DAL+   L  +L HITG+ IV GD
Sbjct:   23 EENVIVANTNELLQAVGIYAKPISSFQELQRIASSMFVAVFEAMFDIRLKGIIREPGSRSDYVHNAQMVIDALSKSILKMNLVHITGDLIVDGD 116
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A2D4CC91_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC91_PYTIN)

HSP 1 Score: 89.0 bits (219), Expect = 4.830e-20
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:   19 AEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALAS----DDLDLSHITGEAIVRGD 300
            A     +L   N LLDR+G  A+    +++L  S SSM VA++E +F  R+ G+VR P+ V+DY HNAQLVVDAL+     +D D +H++GE++  GD
Sbjct:   35 AARRMQVLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGD 132
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A7S2WBU4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBU4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.090e-19
Identity = 45/99 (45.45%), Postives = 73/99 (73.74%), Query Frame = 1 
Query:    7 MTNVAEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD-DLDLSHITGEAIVRGD 300
            MT   +  ++I+   N L  ++ I+ +PI++FEEL+KSASSMFVAIFE +F++R+  ++R+P  V+DY+ NA+LV+ AL+    +DLS+++ EAI RG+
Sbjct:   47 MTAKDDFHEAIVRRTNELFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNAELVMTALSESLPVDLSYLSSEAIYRGE 145
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A2D4BTL5_PYTIN (DUF5745 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTL5_PYTIN)

HSP 1 Score: 89.0 bits (219), Expect = 7.260e-19
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:   19 AEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALAS----DDLDLSHITGEAIVRGD 300
            A     +L   N LLDR+G  A+    +++L  S SSM VA++E +F  R+ G+VR P+ V+DY HNAQLVVDAL+     +D D +H++GE++  GD
Sbjct:   35 AARRMQVLLQTNALLDRLGFGARSFEDYDDLVASVSSMSVALYEKLFQFRLEGVVRVPSSVTDYAHNAQLVVDALSGALLDEDFDAAHLSGESLCSGD 132
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A2R5GFQ7_9STRA (Centrosomal protein of 95 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFQ7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.790e-18
Identity = 44/91 (48.35%), Postives = 67/91 (73.63%), Query Frame = 1 
Query:   31 QSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD-DLDLSHITGEAIVRGD 300
            + I+   N L  ++ I+ +PI++FEEL+KSASSMFVAIFE +F++R+  ++R+P  V+DY+ NA LV+ AL+    +DLS ++GE I RGD
Sbjct:   97 EHIVQRTNDLFVKLNITTRPIQAFEELQKSASSMFVAIFETLFNVRLKNVIRKPRVVTDYITNANLVMTALSESLPIDLSFLSGEDIYRGD 187
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A482SVR5_9ARCH (DUF5745 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR5_9ARCH)

HSP 1 Score: 77.8 bits (190), Expect = 3.290e-16
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 1 
Query:   31 QSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD-DLDLSHITGEAIVRGD 300
            + +++ +N LL   GI+AK IR+  EL + ASS+FVA+FE ++H R+  ++R P    DY  NAQLVVD L    + DLS+ITG  IV  D
Sbjct:   27 RKLISDMNKLLAATGIAAKRIRALSELARVASSIFVALFEHVYHTRIDEVIREPKTREDYEFNAQLVVDRLGEQINYDLSYITGAQIVDSD 117
[Close]
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Match: A0A8C5CCV5_GADMO (DUF5745 domain-containing protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5CCV5_GADMO)

HSP 1 Score: 60.1 bits (144), Expect = 1.060e-8
Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = 1 
Query:   22 EEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAMFHMRMPGIVRRPARVSDYVHNAQLVVDALASD--DLDLSHITGEAIVRGD 300
            E E+  +   N LL + G++ +      +L     ++F+A +E +  +++PG++  P    D +HN Q V+D+LA D   + LSHITGE +VRGD
Sbjct:    5 EGEEDWVDVANDLLRKCGVNFR----LTKLADCVGNVFLAFYENILGVKVPGVIADPKTPEDDIHNVQSVIDSLALDYLQISLSHITGENLVRGD 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12674.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KJC8_9PHAE2.920e-4074.51DUF5745 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FJ17_ECTSI3.650e-3774.51DUF5745 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z720_9STRA8.660e-2958.33DUF5745 domain-containing protein (Fragment) n=1 T... [more]
A0A7S4DH09_HETAK6.670e-2760.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4CC91_PYTIN4.830e-2043.88DUF5745 domain-containing protein n=1 Tax=Pythium ... [more]
A0A7S2WBU4_9STRA6.090e-1945.45Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2D4BTL5_PYTIN7.260e-1943.88DUF5745 domain-containing protein n=1 Tax=Pythium ... [more]
A0A2R5GFQ7_9STRA2.790e-1848.35Centrosomal protein of 95 kDa n=1 Tax=Hondaea ferm... [more]
A0A482SVR5_9ARCH3.290e-1646.15DUF5745 domain-containing protein n=1 Tax=archaeon... [more]
A0A8C5CCV5_GADMO1.060e-834.74DUF5745 domain-containing protein n=1 Tax=Gadus mo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12674contigP-wetherbeei_contig12674:1652..1951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJ17
Preferred nameCEP95
Model size300
Max annot lvl2759|Eukaryota
KEGG koko:K16544
Hectar predicted targeting categoryother localisation
GOsGO:0000922,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0015630,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464
Exons1
Evalue2.05e-37
EggNOG OGs28KYM@1|root,2QTFE@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_004780.1
Cds size294
BRITEko00000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.3706164-UTR-P-wetherbeei_contig12674:1651..16571683185956.3706164-UTR-P-wetherbeei_contig12674:1651..1657Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12674 1652..1657 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.3821676-CDS-P-wetherbeei_contig12674:1657..19511683185956.3821676-CDS-P-wetherbeei_contig12674:1657..1951Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12674 1658..1951 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12674.1.1prot_P-wetherbeei_contig12674.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12674 1658..1951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12674.1.1

>prot_P-wetherbeei_contig12674.1.1 ID=prot_P-wetherbeei_contig12674.1.1|Name=mRNA_P-wetherbeei_contig12674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp
MTNVAEEEQSILASINTLLDRVGISAKPIRSFEELRKSASSMFVAIFEAM
FHMRMPGIVRRPARVSDYVHNAQLVVDALASDDLDLSHITGEAIVRGD
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mRNA from alignment at P-wetherbeei_contig12674:1652..1951+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12674.1.1 ID=mRNA_P-wetherbeei_contig12674.1.1|Name=mRNA_P-wetherbeei_contig12674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig12674:1652..1951+ (Phaeothamnion wetherbeei SAG_119_79)
GACGCCATGACAAACGTCGCGGAGGAGGAGCAGAGCATTTTGGCCTCCAT
CAACACGCTCCTGGACCGGGTGGGCATTTCCGCCAAACCCATTCGCAGCT
TCGAGGAGCTGCGAAAGAGCGCCAGCAGCATGTTCGTTGCCATCTTCGAG
GCCATGTTTCACATGCGGATGCCGGGCATCGTGCGGCGGCCGGCACGCGT
GAGCGACTACGTGCACAACGCGCAGCTCGTCGTGGACGCGCTCGCCAGCG
ACGATCTCGACCTCTCACACATCACTGGCGAGGCCATCGTCCGCGGCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12674:1652..1951+

>mRNA_P-wetherbeei_contig12674.1.1 ID=mRNA_P-wetherbeei_contig12674.1.1|Name=mRNA_P-wetherbeei_contig12674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig12674:1652..1951+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAAACGTCGCGGAGGAGGAGCAGAGCATTTTGGCCTCCATCAACAC
GCTCCTGGACCGGGTGGGCATTTCCGCCAAACCCATTCGCAGCTTCGAGG
AGCTGCGAAAGAGCGCCAGCAGCATGTTCGTTGCCATCTTCGAGGCCATG
TTTCACATGCGGATGCCGGGCATCGTGCGGCGGCCGGCACGCGTGAGCGA
CTACGTGCACAACGCGCAGCTCGTCGTGGACGCGCTCGCCAGCGACGATC
TCGACCTCTCACACATCACTGGCGAGGCCATCGTCCGCGGCGAC
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