mRNA_P-wetherbeei_contig12652.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A7S1AQ46_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AQ46_NOCSC) HSP 1 Score: 74.3 bits (181), Expect = 4.690e-13 Identity = 39/119 (32.77%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAW-SIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A DL+H+ VF+ I +AV G ++FG + E T W A T +MG+ W +++++ W F +++L++N+L+AI++DAY+ +G D +TLW Sbjct: 467 PRLSLFTRTLSAARGDLLHFLVVFISIFLTYAVSGVLLFGRNMEEFATFWRAITTCYRFMMGDFHWEALSHTGRIEAGFWF-MSFMIFIVMLMLNMLLAIVMDAYSDQKGKSTDSETLW 584
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A813CIA4_9DINO (Pkd2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CIA4_9DINO) HSP 1 Score: 71.2 bits (173), Expect = 5.440e-12 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A VDL H+ VFL + FAV G FG + TL A +MGE W+ +SL + L F FV +LL++N+LIAI++D YA + + LW Sbjct: 417 PRLAILTRTLSAAAVDLFHFGLVFLSVFAAFAVMGTAFFGEDELQFSTLDRAASVLFFALMGEVRWTSIDSLGRPVALLFFAAFQFVGLLLMLNMLIAIMMDIYACTKSCATRSEPLW 534
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A812R5W0_SYMMI (Hecd-1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812R5W0_SYMMI) HSP 1 Score: 71.2 bits (173), Expect = 5.770e-12 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A VDL H+ VFL + FAV G FG + TL A +MGE W+ +SL + L F FV +LL++N+LIAI++D YA + + LW Sbjct: 115 PRLAILTRTLSAAAVDLFHFGLVFLSVFAAFAVMGTAFFGEDELQFSTLDRAASVLFFALMGEVRWTSIDSLGRPVALLFFAAFQFVGLLLMLNMLIAIMMDIYACTKSCATRSEPLW 232
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A812S7R8_9DINO (PKD2 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812S7R8_9DINO) HSP 1 Score: 70.9 bits (172), Expect = 7.830e-12 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A VDL H+ VFL + FAV G FG + TL A +MGE W+ +SL + L F FV +LL++N+LIAI++D YA + + LW Sbjct: 467 PRLAILTRTLSAAAVDLFHFGLVFLSVFAAFAVMGTAFFGQDELQFSTLDRAASVLFFALMGEVRWTSIDSLGRPVALLFFGAFQFVGLLLMLNMLIAIMMDIYACTKSCATRSEPLW 584
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A812REI7_SYMPI (PKD2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812REI7_SYMPI) HSP 1 Score: 68.9 bits (167), Expect = 3.450e-11 Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A VDL H++ VF + FAV G FG TL A +MGE W+ +SL + L F FV +LL++N+LIAI++D YA + + LW Sbjct: 273 PRLAILTRTLSAAAVDLFHFSLVFFCVFAAFAVMGTAFFGEDEVHFATLDRAASVLFFALMGEVQWTSIDSLGRPVKLLFVGAFQFVGLLLMLNMLIAIMMDIYACTKSCATRSEPLW 390
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A7S2NY79_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NY79_9DINO) HSP 1 Score: 65.5 bits (158), Expect = 1.910e-10 Identity = 38/120 (31.67%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSM-LVVMGESAW-SIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +++ T+A ++VD++H+A VF L + + G +FG R+ E TL A T +V+ E W +++ Y LW+ F +V+L+++N+++AII+D Y R S+ D+++ Sbjct: 27 PRLGMVINTLAGSVVDMLHFAVVFFPTLIAYVISGHFLFGRRLQEFSTLTAAAGTCFRIVIENEFDWDALSEEHFYTSALWIW-SFLLIVVLIMLNMVLAIILDIYNEVRASVDASDSIF 145
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A7S1K349_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K349_9ALVE) HSP 1 Score: 63.9 bits (154), Expect = 1.960e-9 Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVM-NLLIAIIIDAYAAARGSLKDRDTLW 360 P +++ KT++ ++ DL H+A VF I + G + FGH+V T A +S L++MG W + + F+V++ L+M N+L+AIII++Y R + + TLW Sbjct: 322 PMLSVVTKTLSASMKDLFHFAIVFFCIFFSLSFSGMLTFGHKVLYFNTFNQAMTSSFLLMMGWWQWEWLRGVEAESTTMMFIAIFYVIVRLMMVNILLAIIIESYFRVRSKVAEEYTLW 440
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A812NQN6_9DINO (PKD2 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812NQN6_9DINO) HSP 1 Score: 63.5 bits (153), Expect = 2.870e-9 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHY-------------AAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR +L +T++ A VDL H+ A VFL + FAV G FG + TL A +MGE W+ +SL + L F FV +LL++N+LIAI++D YA + + LW Sbjct: 597 PRLAILTRTLSAAAVDLFHFGLGVLESSVGSADAQVFLSVFAAFAVMGTAFFGEDELQFSTLDRAASVLFFALMGEVRWTSIDSLGRPVALLFFAAFQFVGLLLMLNMLIAIMMDIYACTKSCATRSEPLW 727
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A2D4CIQ1_PYTIN (PKD_channel domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIQ1_PYTIN) HSP 1 Score: 62.4 bits (150), Expect = 6.820e-9 Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 1 FLPRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFFVVILLVMNLLIAIIIDAYAAAR 330 F PR N+L +TVA AL + + VF+ I FA+ G +FG RV E TL + ++ + ++ G S+ S Y+ + VV L+++N+++AI++D Y+A R Sbjct: 388 FHPRLNILTRTVARALHQFVGFFVVFVTIFAAFAIAGAALFGDRVKEFSTLDNTIKSCINMLFGSFDISVIESQPYQSGALFYWSYMIVVALVLLNMMLAIVVDTYSAIR 497
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Match: A0A8J2A2W0_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2A2W0_9DINO) HSP 1 Score: 62.4 bits (150), Expect = 7.160e-9 Identity = 37/122 (30.33%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 7 PRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTLWDAFQTSMLVVMGESAWSIANSLSYRLPLWVGRGFFF----VVILLVMNLLIAIIIDAYAAARGSLKDRDTLW 360 PR ++ T+ A VD++H+ VF + +A+ G +VFG + E TL + T +V G+ W + R+ W FF+ +V+L+++N+L+AII+D Y +G +TL+ Sbjct: 586 PRLGVVTNTIINAAVDILHFLVVFSSVFFAYALAGVIVFGRHLQEFATLDVSLTTCWRLVFGDFDWERTS----RIAPWEAAVFFYSFTLLVVLIMLNMLLAIILDTYMDVKGQSTKAETLY 703 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12652.1.1 >prot_P-wetherbeei_contig12652.1.1 ID=prot_P-wetherbeei_contig12652.1.1|Name=mRNA_P-wetherbeei_contig12652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp FLPRANLLVKTVAIALVDLIHYAAVFLFILGGFAVEGWMVFGHRVSELGTback to top mRNA from alignment at P-wetherbeei_contig12652:3..945+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12652.1.1 ID=mRNA_P-wetherbeei_contig12652.1.1|Name=mRNA_P-wetherbeei_contig12652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=943bp|location=Sequence derived from alignment at P-wetherbeei_contig12652:3..945+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12652:3..945+ >mRNA_P-wetherbeei_contig12652.1.1 ID=mRNA_P-wetherbeei_contig12652.1.1|Name=mRNA_P-wetherbeei_contig12652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig12652:3..945+ (Phaeothamnion wetherbeei SAG_119_79)back to top |