mRNA_P-wetherbeei_contig12651.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A4D9D4Q9_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4Q9_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.680e-47 Identity = 82/162 (50.62%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 13 LKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADE--------------VRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQ-----RQAGLQLHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 LK+L+ L GH+DRVW V+WSP G LASC GD+++RVWG + G + D+ G+W L L DG TRTVR C WSPCG L AVSFD T VIW+ QAG ++ +E AA +EGH+ E K VAW+ G LLATC RDKSVWIW Sbjct: 3 LKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGGKDDRNEEETGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIW 164
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A2R5GR77_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR77_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.010e-46 Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 1 Query: 31 LRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGP---LSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQ-------AGLQLHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 L+GH DRVW VAWSP G LLASC DKS+RVW G G A W C+ LED +RTVRSC +SPCG +L A SFD TVVIWQR +G +E +VLEGH++EVKSVAW A+G ++ATC RDKS+WIW Sbjct: 24 LKGHDDRVWHVAWSPCGKLLASCGADKSIRVWAKSPKAPGAAGGAAAASPAEDEWLCVATLEDTQSRTVRSCEFSPCGSYLAAASFDATVVIWQRGHREADDGSGAIEEWECVSVLEGHENEVKSVAWSADGSMIATCSRDKSIWIW 170
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: UPI001ED8787A (probable cytosolic iron-sulfur protein assembly protein Ciao1 isoform X2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8787A) HSP 1 Score: 155 bits (391), Expect = 3.690e-43 Identity = 75/150 (50.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 4 MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQ----AGLQLHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 M RL+ L L GH RVW VAW+P G +LASC DK++R+W + +Q D++ G+WTC L D RT+R+ WSPCG L + SFD T IW+R+ G FE A LEGH+SEVKSV+W G LLATC RD+SVWIW Sbjct: 1 MGRLELLQTLTGHQGRVWNVAWNPQGDILASCGEDKTIRLW---TNSPSSQGDKL---GNWTCRSTLVDAHQRTIRAIAWSPCGHRLASASFDSTTAIWERRQQLNTGRGADFECVATLEGHESEVKSVSWARSGRLLATCSRDRSVWIW 144
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A1Y2I4E4_9FUNG (Probable cytosolic iron-sulfur protein assembly protein 1 n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I4E4_9FUNG) HSP 1 Score: 153 bits (386), Expect = 1.830e-42 Identity = 77/146 (52.74%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 22 LAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGP--LSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQAGLQ----LHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 LA L GHSDR W+++W P G LLAS S DKSVR+WGP + G G+ A WTC L+ G RTVRS +SP G L SFD T+ IW R + L +E AA LEGH+SE K+VAW ++G LLATC RDKSVWIW Sbjct: 28 LATLSGHSDRAWSLSWHPSGTLLASSSSDKSVRIWGPNPSASGPGSAAP------GWTCKATLDSGHKRTVRSVAFSPRGAVLATASFDATIGIWDRDPMAEGTGALEYEYAATLEGHESEAKAVAWSSDGALLATCARDKSVWIW 167
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A8K0K176_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K176_LADFU) HSP 1 Score: 152 bits (384), Expect = 7.170e-41 Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 4 MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQR---QAGLQLH---FEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 M RL+ L L GH RVW VAW+P G +LASC DK++R+W + G Q D + G+W C L D RT+R+ WSPCG L + SFD T +W+R Q+G + FE A LEGH+SEVKSV+W G LLATC RD+SVWIW Sbjct: 15 MGRLELLQTLSGHQGRVWNVAWNPRGDILASCGEDKTIRLW--TTEGTSGQGDSI--VGNWVCRSTLVDAHQRTIRAVAWSPCGNRLASASFDATTAVWERRIQQSGGLIRGKEFECVATLEGHESEVKSVSWARSGRLLATCSRDRSVWIW 162
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A2G5B4H6_COERN (Probable cytosolic iron-sulfur protein assembly protein 1 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B4H6_COERN) HSP 1 Score: 148 bits (373), Expect = 2.500e-40 Identity = 81/166 (48.80%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 4 MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSG-----GRGAQA-------------DEVRRYG-SWTCLLVLEDGPTRTVRSCCWSPC-GRFLVAVSFDGTVVIWQRQAGLQLHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 M RLK +AEL GH DRVW V+W G LASCS DKS R+WGP++ G A+A DE R +W CL +++ RTVRS + P GR L SFDGT IW+R + ++ A LEGH++E KSVAW A G LLATCGRDKSVWIW Sbjct: 1 MPRLKLVAELVGHEDRVWQVSWDAAGTRLASCSSDKSARIWGPIAQSQFFTGEIAEAEAAMEVDIDTSDRDEHRSTSDTWQCLETIDNAHKRTVRSVAFEPTQGRVLATASFDGTTAIWERGPNDET-YDCVATLEGHENEAKSVAWSASGQLLATCGRDKSVWIW 165
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: F0XXR8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXR8_AURAN) HSP 1 Score: 145 bits (366), Expect = 6.300e-40 Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 49 RVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQ--------AGLQLHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 RVW AWSPDG+LLASCS D+ V++W G+W + L+D RTVR C WSPCGR+L AVSFDGT +W+R L +E A LEGH++EVK AW+A LLATCGRDKSVW+W Sbjct: 1 RVWHAAWSPDGSLLASCSSDRCVKIWHCAG-------------GAWGLVSTLDDAHERTVRKCDWSPCGRYLAAVSFDGTCCVWRRADXXXXXXXXXXPLEWEIIATLEGHENEVKGAAWNASATLLATCGRDKSVWLW 126
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: E9FYH9_DAPPU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 n=3 Tax=Daphnia TaxID=6668 RepID=E9FYH9_DAPPU) HSP 1 Score: 141 bits (356), Expect = 3.110e-38 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 4 MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQAGLQLH-FEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 M+RL +L +L GH VW V W+ +G +L SC DK++R+WG R +++ W C +L DG RT+RS +SPC + + + SFDGT IW + + + +E A LEGH++EVK VAW A G LATC RDKSVWIW Sbjct: 1 MARLDELCKLPGHQGIVWNVGWNQEGNILVSCGEDKTIRLWG-----RNVNSND------WVCRSILSDGHQRTIRSVSFSPCNKLISSASFDGTCCIWDKSTSTEGNQYECTATLEGHENEVKCVAWSASGSFLATCSRDKSVWIW 136
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A0N1ILE6_LEPSE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1ILE6_LEPSE) HSP 1 Score: 140 bits (353), Expect = 3.050e-37 Identity = 66/152 (43.42%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 7 SRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWG------PLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQAGLQ-LHFEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 +R++++A LRGH DRVW V W P A+LASCSGD +VR+W SGG G A G W C+ LE +RT+R WSP G ++ SFD T +W+R FE +L+GH+SEVK V W A +L TC RD + W+W Sbjct: 23 ARVRKVATLRGHKDRVWCVRWCPTAAVLASCSGDATVRLWSRQHNTAASSGGSGESAGXXXXXGGWRCIGTLEGEHSRTIRHISWSPSGEYIACASFDHTATVWRRNVDSDDFTFEVEGLLDGHESEVKCVEW-ATDSMLITCSRDHTAWVW 173
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Match: A0A8J2S7J1_9CRUS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S7J1_9CRUS) HSP 1 Score: 142 bits (357), Expect = 2.220e-36 Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 4 MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAQADEVRRYGSWTCLLVLEDGPTRTVRSCCWSPCGRFLVAVSFDGTVVIWQRQAGLQLH-FEQAAVLEGHDSEVKSVAWHAEGDLLATCGRDKSVWIW 441 M+RL +L +L GH VW V W+ +G +L SC DK++R+WG R +D W C +L DG RT+RS +SPC + + + SFDGT IW + + + +E A LEGH++EVK VAW A G L+TC RDKSVWIW Sbjct: 48 MARLDELCKLPGHQGIVWNVGWNQEGNILVSCGEDKTIRLWG-----RNVNSD-------WVCRSILSDGHQRTIRSVSFSPCNKLIASASFDGTCCIWDKSTSAEGNQYECTATLEGHENEVKCVAWSASGSFLSTCSRDKSVWIW 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12651.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12651.2.1 >prot_P-wetherbeei_contig12651.2.1 ID=prot_P-wetherbeei_contig12651.2.1|Name=mRNA_P-wetherbeei_contig12651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp MSRLKQLAELRGHSDRVWAVAWSPDGALLASCSGDKSVRVWGPLSGGRGAback to top mRNA from alignment at P-wetherbeei_contig12651:1211..1919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12651.2.1 ID=mRNA_P-wetherbeei_contig12651.2.1|Name=mRNA_P-wetherbeei_contig12651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=709bp|location=Sequence derived from alignment at P-wetherbeei_contig12651:1211..1919+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12651:1211..1919+ >mRNA_P-wetherbeei_contig12651.2.1 ID=mRNA_P-wetherbeei_contig12651.2.1|Name=mRNA_P-wetherbeei_contig12651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig12651:1211..1919+ (Phaeothamnion wetherbeei SAG_119_79)back to top |