mRNA_P-wetherbeei_contig12647.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12647.1.1 vs. uniprot
Match: A0A7Z9U8Z9_9BACT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8Z9_9BACT) HSP 1 Score: 497 bits (1279), Expect = 2.740e-174 Identity = 241/346 (69.65%), Postives = 294/346 (84.97%), Query Frame = 1 Query: 34 LMAYVDEFRGDSRAWTTLAQLQIQSGDFEDAISTLKSALSSDSKNAQALWDLGRLYVRMGRSREAVGYYELIINDPAEKKSVRRAIERTLADLYFKTGNYNEALELYQREPESNMRMIAPIYEALGDLATAEDLYLRSVKQAPRDARTHLGIAEYWVRRENWPNAASAGRDGLKCTYATEEVHSNLAVALATAQMKERQFEDALKTMDEICQAYPDSVHQLFRKVKILKMLNRNEEAMNSAKDVRRSAEYQTGCAPASSSLWSLLGDCNVWLGDIPGAKDSYSNALRYDFMDSAAVRGLGMVADKEKDHAKAYEMYERFVVLDPLNLATPAIKSMIRELREKLTPE 1071 L ++ ++RGDSRAWT LA+ QIQ G+FE AI TLKSAL +DS+N+QALW+LGRLYVRMGRS++AV YY II DP EK+SVRRAIER LADLYF+TG Y E+LE+YQRE ESN+ MIAPIYEA+ +L TAE+LYLRSV Q+PRDAR+HLG+AEYWVRRE W A + + GL+CTYATE+VHSNLAVALAT+QM+ Q E A +TM+EICQ YPDS+HQ+FRKVKIL ML R EEA+ A++VR SAE+QTGCAPA SSLWSLLGDC+ LG+I A+++YSNAL+YDFMDS AVRGLG+VA+K+KDHA+A EMY+RFV+LDPLNLATP I++ I ELREK+ P+ Sbjct: 1 LQTHLQDYRGDSRAWTILARQQIQGGEFEKAIETLKSALRADSRNSQALWELGRLYVRMGRSQDAVDYYSEIIYDPNEKRSVRRAIERALADLYFRTGRYRESLEIYQRELESNLAMIAPIYEAVEELETAEELYLRSVVQSPRDARSHLGLAEYWVRREEWHKAIESAKKGLECTYATEDVHSNLAVALATSQMRTDQIESAYQTMEEICQTYPDSIHQVFRKVKILVMLKRREEALALAEEVRSSAEHQTGCAPAESSLWSLLGDCHSLLGNIKAAEEAYSNALKYDFMDSIAVRGLGIVAEKQKDHARALEMYQRFVLLDPLNLATPTIRNRIEELREKVGPQ 346
BLAST of mRNA_P-wetherbeei_contig12647.1.1 vs. uniprot
Match: A0A7X8XPI4_9BURK (Tetratricopeptide repeat protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XPI4_9BURK) HSP 1 Score: 439 bits (1130), Expect = 4.120e-149 Identity = 220/353 (62.32%), Postives = 275/353 (77.90%), Query Frame = 1 Query: 1 WQKLSKTFMAELMAYVDEFRGDSRAWTTLAQLQIQSGDFEDAISTLKSALSSDSKNAQALWDLGRLYVRMGRSREAVGYYELIINDPAEKKSVRRAIERTLADLYFKTGNYNEALELYQREPESNMRMIAPIYEALGDLATAEDLYLRSVKQAPRDARTHLGIAEYWVRRENWPNAASAGRDGLKCTYATEEVHSNLAVALATAQMKERQFEDALKTMDEICQAYPDSVHQLFRKVKILKMLNRNEEAMNSAKDVRRSAEYQTGCAPASSSLWSLLGDCNVWLGDIPGAKDSYSNALRYDFMDSAAVRGLGMVADKEKDHAKAYEMYERFVVLDPLNLATPAIKSMIRELREK 1059 W+ L+++ + L V E RGD+RAW LA LQIQ+G FE+AISTLK +L +DSKNAQALW YY+ IINDP+EKKSVRRAIER LA+LYFK G+Y EALE+Y RE ESN+RMIAPIYEA+G+L A+ LYL+SV QAPRDA+ HLG+AEYWVRRENWP AA A R+GL CTYATEEVHSNLAVALATAQMK Q +AL+TM+EIC AYPDS+HQ+FRKVK++ + R +EAM A++VR SA++QTGCAP+SS+LW+LLGD LG I A+ +Y+ AL+YD MD+ AVRGLG++A+K+ + A+A ++YERFVVLDPLNLATP I+ I+ L+ K Sbjct: 102 WRALNESLIKSLSKAVREARGDTRAWNMLANLQIQAGRFEEAISTLKDSLRADSKNAQALWXXXXXXXXXXXXXXXXXYYQDIINDPSEKKSVRRAIERALAELYFKLGHYPEALEIYLREEESNIRMIAPIYEAVGELEEAQALYLKSVAQAPRDAKGHLGLAEYWVRRENWPQAAEAAREGLHCTYATEEVHSNLAVALATAQMKMSQVNEALQTMEEICVAYPDSIHQIFRKVKLILLQGRKDEAMRLAEEVRVSAQHQTGCAPSSSTLWTLLGDTCSLLGRIDEAEQAYTQALKYDAMDATAVRGLGILAEKQGNLAQALDLYERFVVLDPLNLATPTIRQRIKTLQAK 454
BLAST of mRNA_P-wetherbeei_contig12647.1.1 vs. uniprot
Match: A0A355TRP9_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRP9_9BACT) HSP 1 Score: 410 bits (1054), Expect = 3.920e-135 Identity = 204/359 (56.82%), Postives = 264/359 (73.54%), Query Frame = 1 Query: 1 WQKLSKTFMAELMAYVDEFRGDSRAWTTLAQLQIQSGDFEDAISTLKSALSSDSKNAQALWDLGRLYVRMGRSREAVGYYELIINDPAEKKSVRRAIERTLADLYFKTGNYNEALELYQREPESNMRMIAPIYEALGDLATAEDLYLRSVKQAPRDARTHLGIAEYWVRRENWPNAASAGRDGLKCTYATEEVHSNLAVALATAQMKERQFEDALKTMDEICQAYPDSVHQLFRKVKILKMLNRNEEAMNSAKDVRRSAEYQTGCAPASSSLWSLLGDCNVWLGDIPGAKDSYSNALRYDFMDSAAVRGLGMVADKEKDHAKAYEMYERFVVLDPLNLATPAIKSMIRELREKLTPEQL 1077 W KLS F+AEL V + R + R W LA QIQ+G F+DAI TLK ALS+DSKNAQALW+LGRLYVR G ++ A+ YY I+ DP E+KS+RR IE+ LA+LYFK G Y+EAL +Y + ++N MIAPI EA G ++ A+ LY++SV Q+PRDA+ HLG+AEYWVR+ NW A A +DGL+C YATEEVH+NLAVALATA MK QFE AL+ M EIC+ YPDS+H +FRKVK+L +L R EA A++VR+SAE+QTGCAPASS LWSLLGD A+ +Y+ A++YD M++ AVRGL ++A+ + D +AY Y++FV L+PLNLATP +K + + KLTPEQL Sbjct: 275 WAKLSTEFIAELKDQVAKDRTNQRTWNLLATQQIQAGLFDDAIVTLKDALSADSKNAQALWELGRLYVRRGEAQNAIDYYRDIVEDPNERKSIRRGIEKALAELYFKLGMYDEALTIYMSDEDNNAAMIAPILEATGQMSEAQALYIKSVAQSPRDAKCHLGLAEYWVRQGNWDKAIQASKDGLECNYATEEVHTNLAVALATAYMKLGQFEAALQAMYEICELYPDSIHCVFRKVKLLLLLKRGREAAQLAEEVRQSAEHQTGCAPASSVLWSLLGDTCSLAHREAEAEHAYTQAVKYDAMNATAVRGLAILAEHKGDLIRAYSGYKKFVTLEPLNLATPVVKKFLERIASKLTPEQL 633
BLAST of mRNA_P-wetherbeei_contig12647.1.1 vs. uniprot
Match: UPI00037FC921 (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Colwellia piezophila TaxID=211668 RepID=UPI00037FC921) HSP 1 Score: 56.2 bits (134), Expect = 6.400e-5 Identity = 52/191 (27.23%), Postives = 85/191 (44.50%), Query Frame = 1 Query: 43 YVDEFRGDSRAWTTLAQLQIQSGDFEDAISTLKSALSSDSKNAQALWDLGRLYVRMGRSREAVGYYELIINDPAEKKSVRRAIERTLA-DLYFKTGNYNEALELYQREPESNMRMIAPI-----YEALGDLATAEDLYLRSVKQAPR-DARTHLGIAEYWVRRENWPNAASAGRDGLKCTYATEEVHSNLA 594 YVDE + A + LA QI + D AIS+LK +LS D++ L +L + G+ A ++I K A+ LA DL+FK G Y +AL LYQR N + + Y+ L L AE L + + + + + + +A+ + + + + LK + + +NLA Sbjct: 646 YVDEENNRAYALSILANAQITANDINGAISSLKKSLSWDNEVVATHILLTKLLMASGKVEAAAKQIKII-----RSKDKEGAVADLLAGDLFFKQGQYAQALPLYQRALSINPSTASILALYRTYKKLNKLNKAERLLTSQIDSSEQLELKFVIALADVYQLQNKHEKVTNLYHNALKVYSDSPALLNNLA 831 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12647.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12647.1.1 >prot_P-wetherbeei_contig12647.1.1 ID=prot_P-wetherbeei_contig12647.1.1|Name=mRNA_P-wetherbeei_contig12647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp MAELMAYVDEFRGDSRAWTTLAQLQIQSGDFEDAISTLKSALSSDSKNAQback to top mRNA from alignment at P-wetherbeei_contig12647:1..1077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12647.1.1 ID=mRNA_P-wetherbeei_contig12647.1.1|Name=mRNA_P-wetherbeei_contig12647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig12647:1..1077+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12647:1..1077+ >mRNA_P-wetherbeei_contig12647.1.1 ID=mRNA_P-wetherbeei_contig12647.1.1|Name=mRNA_P-wetherbeei_contig12647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig12647:1..1077+ (Phaeothamnion wetherbeei SAG_119_79)back to top |