mRNA_P-wetherbeei_contig12646.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12646.1.1
Unique NamemRNA_P-wetherbeei_contig12646.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A836CPG6_9STRA (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG6_9STRA)

HSP 1 Score: 289 bits (740), Expect = 3.730e-94
Identity = 160/283 (56.54%), Postives = 200/283 (70.67%), Query Frame = 1
Query:    4 TKVIRTPDTIRTLLDGIDNLLLDCDGVLWAGSDPIPG------AIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVATAAD 834
            T  + TPD++   +   DN LLDCDGVLWAGS  +PG      A+E + A+ AAGK+V+FITNNS+KSRR+       YAAKF++FG+ V P+ IVTSGSA+A  L ++   +T AYV+GE GL EELELAG+ C+ +A GAGP M ESEF AL  DP V AV VGW R+F FRQ++ AS YLQ   G  F+G NPD+ADRVG  L PGTGPL+ A++ AS     ++GKPNP LI+ IL    MD ART MVGDRLDTD+AF N GGI++ LV+TGV+T AD
Sbjct:   17 TARLDTPDSLSAFVAAHDNFLLDCDGVLWAGSGALPGESASTGAVETLDALRAAGKRVLFITNNSSKSRRQ-------YAAKFAAFGVSVDPNDIVTSGSAMANYLKME--GITYAYVIGEDGLIEELELAGVTCIRDAKGAGPLMSESEFMALELDPKVQAVCVGWDRSFGFRQMSIASAYLQQ--GVGFIGANPDNADRVGPLLFPGTGPLLAAIQSASGAVPVIIGKPNPILIKGILAQFGMDQARTAMVGDRLDTDMAFANAGGISSVLVMTGVSTDAD 288          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: D7G934_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G934_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.220e-80
Identity = 140/275 (50.91%), Postives = 181/275 (65.82%), Query Frame = 1
Query:   13 IRTPDTIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLD-VSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVATAAD 834
            + T +T R L+   +  + DCDGVLW GS  I G+++ VKA+  AGK+  F+TNNS+KSRR+       Y  K   FG+  V  + IVTSGSA+AA + + HP V   Y++GE GL EELE+ G+R V E     P M E EFR    DP VGAV VG   +F FRQL  AS Y+Q+  G  FLGTNPD ADRVG  LMPGTGP++ +++ AS     VVGKPNP LIR ++D + +  ++TLMVGDRLDTDI FGN GG+++ LVLTGV+  +D
Sbjct:   17 VDTLETERALVSKYEAFVFDCDGVLWGGSHAIEGSLDTVKALRRAGKRTFFVTNNSSKSRRQ-------YCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVQTVYMIGEEGLEEELEMVGLRVVKEEARPAPGMTEDEFRENVTDPEVGAVVVGLDTSFGFRQLCVASSYIQS--GAHFLGTNPDVADRVGSLLMPGTGPMLTSIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSSALVLTGVSEMSD 282          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A150GQD0_GONPE (Phosphoglycolate phosphatase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQD0_GONPE)

HSP 1 Score: 192 bits (489), Expect = 2.640e-56
Identity = 119/265 (44.91%), Postives = 160/265 (60.38%), Query Frame = 1
Query:   43 LDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLA-VQHP-SVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESE-FRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGV-HLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVAT 825
            L  I  L+ DCDGVLW GSD I  A E ++     GK+++F+TNNS+KSR E       YA+KF S GL+VSP++IV+S    AA L+ +  P S     ++G  G+ +EL+LAGI  +       P M   +  + L  DP++GAV VGW   FS+ +L  AS  L+ +PGCV + TN D AD +G   +MPGTG L+R VE A+   A  V K    L+  +  T+ +DP+RT +VGDRLDTDI  G  GG+ TCL LTGV T
Sbjct:   37 LRDIHTLIFDCDGVLWRGSDIIRNAPEALRVFRQQGKRLLFVTNNSSKSRAE-------YASKFGSLGLEVSPEEIVSSSYCAAAYLSSIGFPASGKKVLLLGWSGVEQELQLAGIPFIGGRELEVPAMDNIDSMKQLKVDPSIGAVVVGWDPNFSYSRLVYASVCLRELPGCVLVATNTDCADHIGGGRMMPGTGGLVRCVETAAGATAVNVAKGGEWLLPYLCRTYNLDPSRTAIVGDRLDTDIHLGRQGGLFTCLPLTGVTT 294          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: L8GFB0_ACACA (4nitrophenylphosphatase-like protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFB0_ACACA)

HSP 1 Score: 192 bits (487), Expect = 3.460e-56
Identity = 109/265 (41.13%), Postives = 155/265 (58.49%), Query Frame = 1
Query:   31 IRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVAT 825
            +   LD  D  LLDCDGVLW GS  +P   E ++ + + GK+++F+TNNSTKSR +       Y   F+ FG++VS D++++S SA+A  L  +      AYVVGE G+  EL+  GI  +   V     M   E   +  DP +GAV VG     ++R++A A  +L+  P  +FL TN D       H++PG+G ++  VE  S + A V+GKP+  LI  ++  + +D  RT MVGDRL+TDI FG  GGI+T LVLTGV T
Sbjct:   12 VPKFLDSFDTFLLDCDGVLWRGSTLLPHTKEVLQQLRSMGKRLLFVTNNSTKSRED-------YKKVFAKFGIEVSADEVISSSSAVAHYLKDEAHFTKTAYVVGEAGITRELDALGISWIG-GVDHKENMTMQELEHIELDPRIGAVVVGLDTNINYRKVAYAQLHLRNRPETLFLATNADSTFPSAGHMLPGSGTMVAMVEACSGRKALVIGKPSKTLIDLVVHQYGLDKERTCMVGDRLNTDIQFGLNGGISTLLVLTGVTT 268          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A6P7F5Q0_DIAVI (glycerol-3-phosphate phosphatase n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7F5Q0_DIAVI)

HSP 1 Score: 191 bits (486), Expect = 1.320e-55
Identity = 110/270 (40.74%), Postives = 162/270 (60.00%), Query Frame = 1
Query:   31 IRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRA----LSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLM-PGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVAT 825
            +  +LDGID +LLDCDGVLW  ++PIPG++E V  +   GKK+ F+TNNSTK R +       +  K    G +V  + I+++   + + L   H      YV+G  G+A+ELE AGI+ +    G GP+++++        +  DP VGAV VG+    SF ++  A+ YL   P C+F+ TN D+   +   L+ PG G ++RAVE  +++ ATV+GKPNP ++ A++  H +DP RT+MVGDR +TDI  G   G  T LVLTGV T
Sbjct:   51 VTKILDGIDTVLLDCDGVLWLENEPIPGSVEVVNMLKEIGKKIAFVTNNSTKIRED-------FVIKAKRMGYNVEKEDIISTAYLVVSYLK-SHRFSKKVYVIGSKGIAQELESAGIKHL----GIGPDVIQNNLATTVENIHIDPDVGAVVVGFDEHLSFVKVMKAASYLSK-PSCLFIATNTDERFPMSSDLIVPGAGTMVRAVETVAQREATVLGKPNPYIVDALITEHGIDPKRTIMVGDRCNTDILLGTRCGFQTLLVLTGVTT 307          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A067CU01_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU01_SAPPC)

HSP 1 Score: 189 bits (481), Expect = 2.320e-55
Identity = 120/265 (45.28%), Postives = 149/265 (56.23%), Query Frame = 1
Query:   28 TIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRAVECA-SRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGV 819
            + R  +DG+D  L DCDGVLW GS  I GA E ++ + + GKKVVF+TNNSTK R         Y  K +  G+  +   IVTS SA AA L  QH      YVVGE GLA E+   G     E  G               DPAVGAV +G  RA S+ +L+ A+  +   PGC F  TN D    V   ++PG G  + A+  A  R+P  VVGKP+  L++ IL TH +DPART MVGDRL+TDI FG  GG+ T LVLTGV
Sbjct:   15 SFRQWIDGLDAFLFDCDGVLWRGSAAIEGAKEAIQLLRSLGKKVVFVTNNSTKCRDT-------YVDKLAGQGISATVSDIVTSASACAAYLR-QHDVQGKVYVVGEAGLAAEVSAQGF----ENFGLEHNGKTEVPTPFVVDPAVGAVVIGLDRAISYYKLSYAAVSILTNPGCKFFATNTDPTFPVDGAVLPGGGTCVAALATAVGREPDAVVGKPSQALLQTILSTHNLDPARTCMVGDRLNTDIEFGRLGGLRTLLVLTGV 267          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A835TAA4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TAA4_CHLIN)

HSP 1 Score: 190 bits (483), Expect = 5.200e-55
Identity = 125/288 (43.40%), Postives = 168/288 (58.33%), Query Frame = 1
Query:   13 IRTPDTIRTLLD---------GIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQH--PSVTAA----YVVGEGGLAEELELAGIRCVSEAVGAGPEMLESE-FRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGV-HLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVAT 825
            +  P T  T+LD         G+  L+ DCDGVLW GSD I  A E ++     GK+++F+TNNS+KSR        GY +KFSS GLDV+ ++IV+S    AA L  Q   P  + A     ++G  G+ +ELE AGI  V       P M + +  +AL  DP VGAV VGW   FS+ +L  AS +L+ +PGC+ + TN D AD +G   +MPGTG L++AVE AS   A  V K    L+  +  T+ ++PART +VGDR+DTDI  G  GG+ TCL LTGV T
Sbjct:   47 LAAPATPVTVLDEHTAPERLRGMSTLIFDCDGVLWRGSDIIHNAPEALQEFRRQGKRLLFVTNNSSKSRA-------GYVSKFSSLGLDVAAEEIVSSSYCAAAYLTSQGFGPGGSRARGKVLLLGWSGVEQELEHAGIPYVGGRGLQVPAMDDLDAMKALEVDPDVGAVVVGWDPNFSYSRLVYASIHLRELPGCLLVATNMDCADHIGGGRMMPGTGGLVKAVETASGVSAVNVAKGGEWLLPYLCRTYGLEPARTAIVGDRMDTDIHLGRQGGLFTCLPLTGVTT 327          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: W7TPB0_9STRA (Phosphoglycolate phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPB0_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.620e-54
Identity = 111/275 (40.36%), Postives = 154/275 (56.00%), Query Frame = 1
Query:   22 PDTIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTAAYVVGEGGLAEELELAGIRCV---SEAVGAGPEMLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVATAADA 837
            P  + T+LD  D  L DCDGVLW GS  +PG+   +  + A GK++ F+TNNS+KSR E       Y AKF+   + V   +IV S  A A  + +Q+P V  A+V+G  GL +EL L G+  +    ++        ES+F +   D  V AV  GW   F+F +L+ AS YLQ  P   F+ TN D  D++    +PG G  + A+E +  + A  VGKP+  LI  +L T+ ++P RTL++GDRLDTDI  G  GG  T LV TG  T  DA
Sbjct:   48 PQALATVLDSYDTFLFDCDGVLWRGSALLPGSTRTLALLRAQGKRLFFVTNNSSKSRAE-------YVAKFTKLNIPVDISEIVPSSWAAAEYVRIQYPEVKKAFVIGSQGLVDELNLVGVTSLCGADQSYATRCFATESDFLSAEIDKDVTAVLCGWDLTFNFAKLSLASLYLQRKPTAAFIATNKDAFDKLADRNIPGNGCAVAALEQSVGREAVNVGKPSRWLINYLLRTYNLNPRRTLVIGDRLDTDIQLGIAGGCDTVLVGTGCTTTEDA 315          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: UPI000C2533EE (glycerol-3-phosphate phosphatase-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C2533EE)

HSP 1 Score: 187 bits (474), Expect = 3.240e-54
Identity = 114/277 (41.16%), Postives = 165/277 (59.57%), Query Frame = 1
Query:   22 PDTIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALLAVQHPSVTA----AYVVGEGGLAEELELAGIRCVSEAVGAGPEMLE----SEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLM-PGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVAT 825
            PD ++  LD  D +L DCDGVLW  ++P+PG++E +  +  AGKK++F+TNNSTK R   DF+     AK    G  V  D+I+++G      L V +   T      Y++G  GLA+ELE AGI+ +    G GP++L+            DP VGAV VG+   FS+ ++  A+ YL   P C+F+ TN D+   +   L+ PGTG ++RAVE  +++ A VVGKPN  + +A+++ H +DP RT+M+GDR +TDI  G   G  T LVLTGV T
Sbjct:   15 PD-LKKFLDSFDTVLTDCDGVLWLENEPLPGSVEVINQLREAGKKIMFVTNNSTKIR--DDFV-----AKAKRMGFIVEKDEIISTG-----YLTVSYLKSTGFNKKVYIIGSKGLAQELESAGIKHL----GIGPDVLQYNLAQTIETYQPDPDVGAVIVGFDEHFSYIKMLKAASYLNK-PSCLFIATNTDERFPMNSDLVVPGTGAIVRAVETVAQREAIVVGKPNAYISQALINEHGVDPKRTIMIGDRCNTDILLGTRCGFQTFLVLTGVTT 273          
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Match: A0A433PHZ2_9FUNG (4-nitrophenylphosphatase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PHZ2_9FUNG)

HSP 1 Score: 185 bits (470), Expect = 1.030e-53
Identity = 113/280 (40.36%), Postives = 154/280 (55.00%), Query Frame = 1
Query:   13 IRTPDTIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAGKKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAALL--AVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPE---MLESEFRALSADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVHLMPGTGPLIRA-VECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGDRLDTDIAFGNGGGIATCLVLTGVATAAD 834
            ++TP     LLD  D  L DCDGVLW G++ IPG  E +  + + GK+++F+TNNS+ SR         Y  KF+  G++   D I +S  A A  L   V  P     Y++G+ G+ EEL   GIR      GAG +   M E +F ++  DP VGAV  G     ++++ A A  YL   PGC+FL TN D      + + PG G +    +   SR P  V+GKPN  ++  I+  + +D  RTLM+GDRLDTDI FGN GG+AT  VLTGV T  D
Sbjct:    6 LQTPKDYEELLDKFDTFLFDCDGVLWRGNEAIPGVPEAMNYIRSKGKQLLFVTNNSSVSRAN-------YCKKFTKLGIEAHVDDIFSSAYAAAVYLKNVVAFPPEKKVYIIGQAGIQEELAAEGIRHS----GAGDDNENMQEMDFSSIKPDPEVGAVLCGIDFHINYKKYAKAHTYLTKNPGCLFLLTNDDSTFPTEIGIFPGAGAISSTLITSTSRTPDAVLGKPNQTMMDCIIARYSLDLNRTLMIGDRLDTDIDFGNRGGLATLAVLTGVTTEQD 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12646.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPG6_9STRA3.730e-9456.54Haloacid dehalogenase-like hydrolase family protei... [more]
D7G934_ECTSI1.220e-8050.91Haloacid dehalogenase-like hydrolase family protei... [more]
A0A150GQD0_GONPE2.640e-5644.91Phosphoglycolate phosphatase n=1 Tax=Gonium pector... [more]
L8GFB0_ACACA3.460e-5641.134nitrophenylphosphatase-like protein n=1 Tax=Acant... [more]
A0A6P7F5Q0_DIAVI1.320e-5540.74glycerol-3-phosphate phosphatase n=1 Tax=Diabrotic... [more]
A0A067CU01_SAPPC2.320e-5545.28Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A835TAA4_CHLIN5.200e-5543.40Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
W7TPB0_9STRA1.620e-5440.36Phosphoglycolate phosphatase n=1 Tax=Nannochlorops... [more]
UPI000C2533EE3.240e-5441.16glycerol-3-phosphate phosphatase-like n=1 Tax=Lept... [more]
A0A433PHZ2_9FUNG1.030e-5340.364-nitrophenylphosphatase n=1 Tax=Endogone sp. FLAS... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12646contigP-wetherbeei_contig12646:43..1634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G934
PFAMsHydrolase_6,Hydrolase_like
Model size837
Max annot lvl2759|Eukaryota
KEGG rclassRC00017,RC00151
KEGG koko:K01101,ko:K19269
KEGG ReactionR01334,R03024
KEGG Pathwayko00627,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,map00627,map00630,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
Exons4
Evalue2e-81
EggNOG OGsCOG0647@1|root,KOG2882@2759|Eukaryota
EC3.1.3.18,3.1.3.41,3.1.3.48
Descriptionphosphoglycolate phosphatase activity
Cds size837
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185955.6559439-CDS-P-wetherbeei_contig12646:42..1381683185955.6559439-CDS-P-wetherbeei_contig12646:42..138Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12646 43..138 -
1683185955.667545-CDS-P-wetherbeei_contig12646:435..6391683185955.667545-CDS-P-wetherbeei_contig12646:435..639Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12646 436..639 -
1683185955.6764476-CDS-P-wetherbeei_contig12646:971..12961683185955.6764476-CDS-P-wetherbeei_contig12646:971..1296Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12646 972..1296 -
1683185955.6852877-CDS-P-wetherbeei_contig12646:1422..16341683185955.6852877-CDS-P-wetherbeei_contig12646:1422..1634Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12646 1423..1634 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12646.1.1prot_P-wetherbeei_contig12646.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12646 43..1634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12646.1.1

>prot_P-wetherbeei_contig12646.1.1 ID=prot_P-wetherbeei_contig12646.1.1|Name=mRNA_P-wetherbeei_contig12646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp
MTKVIRTPDTIRTLLDGIDNLLLDCDGVLWAGSDPIPGAIECVKAMIAAG
KKVVFITNNSTKSRRESDFLTRGYAAKFSSFGLDVSPDQIVTSGSALAAL
LAVQHPSVTAAYVVGEGGLAEELELAGIRCVSEAVGAGPEMLESEFRALS
ADPAVGAVAVGWCRAFSFRQLATASYYLQAVPGCVFLGTNPDDADRVGVH
LMPGTGPLIRAVECASRQPATVVGKPNPELIRAILDTHRMDPARTLMVGD
RLDTDIAFGNGGGIATCLVLTGVATAADA
back to top

mRNA from alignment at P-wetherbeei_contig12646:43..1634-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12646.1.1 ID=mRNA_P-wetherbeei_contig12646.1.1|Name=mRNA_P-wetherbeei_contig12646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1592bp|location=Sequence derived from alignment at P-wetherbeei_contig12646:43..1634- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGAAGGTCATCCGCACTCCCGATACCATTCGAACGCTTCTCGACGG CATCGACAACCTCCTGCTAGATTGCGACGGTGTCTTATGGGCCGGAAGCG ACCCGATTCCAGGAGCTATCGAGTGCGTCAAGGCAATGATTGCAGCTGGA AAGAAAGTGGTGTTCATCACAAACAACAGTACGAAGAGCAGGCGAGAGAG CGACTTTCTTACGTTTGTCTGTCCGAATTCTTTCGCATCGAAGCAGCAAA CAAGAAATCATCACAACCTCCCTTTGTCCTCCTAACAGCTCATCCGAACC CTCTGCGCGACTTTCCTCCGCATCAACCCCGAAACCAGACGGGGATACGC CGCCAAGTTCTCGTCGTTCGGGTTGGACGTCTCCCCCGACCAGATCGTCA CGTCCGGCTCGGCGTTGGCGGCGCTTCTCGCCGTCCAGCATCCCTCCGTG ACGGCAGCCTACGTCGTCGGTGAGGGCGGGCTGGCGGAGGAGTTGGAGCT GGCTGGGATCCGCTGCGTTTCCGAAGCCGTCGGCGCCGGACCCGAAATGC TCGAGTCCGAGTTCCGGGCGCTGTCCGCTGACCCGGCCGTCGGTGCCGTC GCCGTCGGGTGGTGCCGGGCGTTTTCCTTCCGCCAACTGGCCACCGCTTC GTACTACTTGCAGGTACGGACCCTGACGGCCCAGAAAACGATAGATCTTC CTCTTTGTGCTTGCTCTTAACTTGTGTTTGTCGCGGCCAGTGCAACCTTT GGATTCGTACCCGCTGGTTTGTCGCACGGAACGGTTCAAATGACGCTTCT GTGTGTCTTTGTTCTTCATACTGTTACGTGCGGCAGTGGGCCGGCGGGCT GACGAGTCACCTTCTTTCTGTTTCAGTTTCAGGTTTCAATATGCTTTTCT CTTGTTCTTCTTCGAAAAAGTTACCGATACAGGCCGTTCTTTCCATCCAT TCGTCCATCCATTACGGTTTCTCCGTATCTCCCTACGGTTTCCAGGCGGT GCCTGGCTGTGTCTTCCTCGGGACCAACCCGGACGATGCCGACCGGGTCG GCGTTCACCTGATGCCCGGGACGGGTCCGCTGATCCGCGCCGTCGAGTGC GCCAGCCGGCAGCCGGCGACAGTGGTCGGCAAGCCGAATCCGGAGCTCAT CCGGGCCATCCTGGACACACACAGAATGGATCCGGCAAGGACACTGATGG TGAGCCGACTTGATTTTCTACCTGGAAGGTTGCCCAGTCTTCGTCTTGCG GGGCCGACAGTAAGGTGGAACGGGGAGAAATGAAGATGGCATGCTTACTA TTTTAAATCATACAGGGGAAGAGAAGGTTCGAGGTTCCGGAGGCGATTGC TTCGTGTTCTGTGCATGGCCCCGCTGTCTGCCGGCGCCAACGTGCTGTCG CCGACGACCGTTGCCGACTGCTGCCGCCGCCAGCCAACGTCCAAACCGCT GAAACCGCCGAAACCGTCGGAACTGCCAAAACCGCTGGAAACTCAGGTGG GGGACCGCCTCGACACGGACATCGCCTTTGGGAACGGCGGCGGCATCGCC ACGTGCCTTGTGCTCACGGGCGTCGCCACCGCCGCGGACGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12646:43..1634-

>mRNA_P-wetherbeei_contig12646.1.1 ID=mRNA_P-wetherbeei_contig12646.1.1|Name=mRNA_P-wetherbeei_contig12646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig12646:43..1634- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGAAGGTCATCCGCACTCCCGATACCATTCGAACGCTTCTCGACGG
CATCGACAACCTCCTGCTAGATTGCGACGGTGTCTTATGGGCCGGAAGCG
ACCCGATTCCAGGAGCTATCGAGTGCGTCAAGGCAATGATTGCAGCTGGA
AAGAAAGTGGTGTTCATCACAAACAACAGTACGAAGAGCAGGCGAGAGAG
CGACTTTCTTACACGGGGATACGCCGCCAAGTTCTCGTCGTTCGGGTTGG
ACGTCTCCCCCGACCAGATCGTCACGTCCGGCTCGGCGTTGGCGGCGCTT
CTCGCCGTCCAGCATCCCTCCGTGACGGCAGCCTACGTCGTCGGTGAGGG
CGGGCTGGCGGAGGAGTTGGAGCTGGCTGGGATCCGCTGCGTTTCCGAAG
CCGTCGGCGCCGGACCCGAAATGCTCGAGTCCGAGTTCCGGGCGCTGTCC
GCTGACCCGGCCGTCGGTGCCGTCGCCGTCGGGTGGTGCCGGGCGTTTTC
CTTCCGCCAACTGGCCACCGCTTCGTACTACTTGCAGGCGGTGCCTGGCT
GTGTCTTCCTCGGGACCAACCCGGACGATGCCGACCGGGTCGGCGTTCAC
CTGATGCCCGGGACGGGTCCGCTGATCCGCGCCGTCGAGTGCGCCAGCCG
GCAGCCGGCGACAGTGGTCGGCAAGCCGAATCCGGAGCTCATCCGGGCCA
TCCTGGACACACACAGAATGGATCCGGCAAGGACACTGATGGTGGGGGAC
CGCCTCGACACGGACATCGCCTTTGGGAACGGCGGCGGCATCGCCACGTG
CCTTGTGCTCACGGGCGTCGCCACCGCCGCGGACGCC
back to top