mRNA_P-wetherbeei_contig12643.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: M4NAC7_9GAMM (Putative autotransporter protein,putative Ig domain-containing protein n=5 Tax=Rhodanobacteraceae TaxID=1775411 RepID=M4NAC7_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 1.160e-7 Identity = 58/194 (29.90%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 85 AGIDLASTEGLTGGLAIGYAKGKDKFRGGIGE----TEVETTSVQAFVS--AGQTIVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGF---GGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGDEFATRLAGSP 639 +G+ L + + LT LA+G G IG+ + V++ +V A+ S G++ + GY W D RR +T G T S++ K W V G+ D L PY ++D+ RAT+D Y+ETG V L +T +TS G + G +LRA + + L G + A R A P Sbjct: 1967 SGLSLGADKQLTQSLALGLGVGYGHDASDIGQHGSRSTVDSYNVAAYGSYRPGESAYMDALVGYQWLQFDARRFVTDNGNTVRGSRDGKQWFASFSV----GYRHQADDMLLTPYGRLDIARATLDGYTETGDAVFALSYRDQTVKTSTATVGLLARWTVQRDYGVWAPQLRAEFGHDLQGS-SQAAMRYADLP 2155
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A1G4TZM2_9HYPH (Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Ancylobacter TaxID=99 RepID=A0A1G4TZM2_9HYPH) HSP 1 Score: 62.8 bits (151), Expect = 1.930e-7 Identity = 62/246 (25.20%), Postives = 102/246 (41.46%), Query Frame = 1 Query: 79 FMAGIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVSAG-QTIVFSGVAGYGWSNLDTRRSLTSLGLTAT--SSQEAKVWSLGAKVAAPMGFGGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGDEFATRLAGSPVAFLTSVQSPSRSAVHIGAALSGELAPNVTASASYRGLLSGDRGAHALQARVAFAF 807 F+AG D+ S T GLA GYA + + +T + A+ A G A YGWS++DT RS+ L L S + ++ + A + GG + P+AQ+ D+++ETGA +GL + + G + LA GG +T WR+ E A + AF + + + GA + + NV + Y G + D ++A++ + F Sbjct: 905 FLAGGDVTSGN-YTFGLAAGYASASLDVDDRLSSADADTVLLAAYAGASFDAFRLRGGASYGWSSIDTTRSVAMLSLVENPLGSYDGSTANIFVEAAYAVEAGGIA-FEPFAQMAWSWIDTDSFTETGAFTSGLASSGLSYDVPYSTLGLRVATTLAMGGGTVTPHASLAWRHAYGDITPELGMAFASTGTAFTVAGAPIAEDSFLFGAGIDIAVGDNVLLNVGYEGQYASDVNSNAIKGGFTYRF 1148
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A0Q9PKV3_9GAMM (Uncharacterized protein n=2 Tax=Rhodanobacter sp. Soil772 TaxID=1736406 RepID=A0A0Q9PKV3_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 2.760e-7 Identity = 49/144 (34.03%), Postives = 69/144 (47.92%), Query Frame = 1 Query: 88 GIDLASTEGLTGGLAIGYAK-GKDKFRGGIGETEVETTSVQAFVS--AGQTIVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGF---GGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETS 501 G D T+ L GL +GY D R G T V++ +V A+ S G++ + GY W D RR +T G T S++ K W V G+ D L PY ++D+ RAT+D Y+ETG V L +T +TS Sbjct: 1607 GADKQVTQALALGLGVGYGHDASDVGRHGSRST-VDSYNVAAYGSYRPGESAYVDALVGYQWLQFDARRFVTDNGNTVRGSRDGKQWFASFSV----GYRHQADDMLLTPYGRLDLARATLDGYTETGDAVFALNYRSQTVKTS 1745
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A4R1HZS7_ANCAQ (Outer membrane autotransporter protein n=1 Tax=Ancylobacter aquaticus TaxID=100 RepID=A0A4R1HZS7_ANCAQ) HSP 1 Score: 61.2 bits (147), Expect = 6.240e-7 Identity = 63/246 (25.61%), Postives = 102/246 (41.46%), Query Frame = 1 Query: 79 FMAGIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVSAG-QTIVFSGVAGYGWSNLDTRRSLTSLGL--TATSSQEAKVWSLGAKVAAPMGFGGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGDEFATRLAGSPVAFLTSVQSPSRSAVHIGAALSGELAPNVTASASYRGLLSGDRGAHALQARVAFAF 807 F+AG D+ S T GLA GYA + + +T + A+ A G A YGWS++DT RS+ L L S + ++ + A M GG + P+AQ+ D+++ETGA +GL + + G L LA G +T WR+ E A + +AF + + + GA + + NV + Y G + D ++A++ + F Sbjct: 898 FLAGGDVTSGN-YTFGLAAGYASATLDVDDRMSSADADTVLLAAYAGASFDAFRLRGGASYGWSDIDTTRSVAMLSLFENPLGSYDGATANVFVEAAYAMEAGGIA-FEPFAQMAWSWIDTDSFTETGAFTSGLASSGLSYDVPYSTLGLRLATTLALGEGTVTPHASLAWRHAYGDITPELGMTFASTGIAFSVAGAPIAEDSFLFGAGVDFAVGENVLLNIGYEGQFASDVNSNAIKGGFTYRF 1141
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: UPI001BCEB3E0 (autotransporter domain-containing protein n=1 Tax=Ancylobacter oerskovii TaxID=459519 RepID=UPI001BCEB3E0) HSP 1 Score: 60.5 bits (145), Expect = 1.130e-6 Identity = 62/246 (25.20%), Postives = 105/246 (42.68%), Query Frame = 1 Query: 79 FMAGIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVSAG-QTIVFSGVAGYGWSNLDTRRSLTSLGLTAT--SSQEAKVWSLGAKVAAPMGFGGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGDEFATRLAGSPVAFLTSVQSPSRSAVHIGAALSGELAPNVTASASYRGLLSGDRGAHALQARVAFAF 807 F+AG D+ + T GLA GY + + +T + A+ A YGWS++D+RR+ + LG+T +S + +L + A + + L P+AQI D+++ETGA GL + +T G L LATAGG +T WR+ E A + F + ++ + +GA L ++ N++ + Y G +AL+ + + F Sbjct: 925 FLAGGDV-TIGNTTFGLAAGYVSASSDVDDRLSSVDADTALIAAYAGTSFDAWRLRAGASYGWSDIDSRRTASLLGITENPRASYDGSTANLFLEAAYAVEMNSVA-LEPFAQIAWSWVNTDSFTETGAPATGLSSSGLSFDTPYSTLGFRLATSLATAGGTLTPHASLAWRHAYGDITPEAAMAFIETGSGFSVAGAPIAQDSFVVGAGLGFDVGANLSLNIGYEGQFGDAVETNALKGGLTYRF 1168
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: UPI0007AB960C (autotransporter outer membrane beta-barrel domain-containing protein n=1 Tax=Bradyrhizobium sp. AT1 TaxID=574934 RepID=UPI0007AB960C) HSP 1 Score: 59.7 bits (143), Expect = 1.910e-6 Identity = 68/249 (27.31%), Postives = 107/249 (42.97%), Query Frame = 1 Query: 88 GIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVSAGQT--IVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGFGGDSTLAPYAQIDMQRATIDAYSETGA-GVAGLVVPKRTEE---TSALEAGAALTIPLATAGGGMTARLRAGW--RYRLDGGGDEFATRLAGSP-VAFLTSVQSPSRSAVHIGAALSGELAPNVTASASYRGLLSGDRGAHALQARVAFAF 807 G+D G T G+A+G + G+ + G E F + G++ + Y ++ L++ RS++ LG TAT+S A ++ +A P G T P+A+ D ++SETGA GV LV R + T+ L A + +P G A+L A R+ L GG L G+P + F + +R+ GA + L + ASY G + H L+ V F Sbjct: 630 GVDFWQLPGFTAGVAVGASTGRLRMAGRADRIEANAGHA-GFYARGESGGFTLASAISYSFAALESSRSISFLGETATASSRANSFAASLGIARPFEIGWRITAEPFAKADWYATRQGSFSETGAPGVNQLVQAGRYDVGYGTAGLRAHHRVMMP-----NGYAAQLGASIAVRHELTGGAATTTAALEGAPGIPFAITGVERARTVALTGAEIRWNLTAATSFKASYEGAFASGYDRHTLRGVVRSEF 872
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A1D2UIQ8_9GAMM (Uncharacterized protein n=1 Tax=Rhodanobacter sp. SCN 65-17 TaxID=1660137 RepID=A0A1D2UIQ8_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-6 Identity = 56/205 (27.32%), Postives = 86/205 (41.95%), Query Frame = 1 Query: 1 FAAAGTSFGKRDTEVGQAGSKTSRPMFMAGIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVS--AGQTIVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGF---GGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDG 600 +A +FGK G + G D ++ LT G+ GY + V++ +V + S G++I +AGY W D RR +T G T S++ K W V G+ D L PY ++D+ RA +D Y+ETG V L +T +TS G + G T +LRA + + + G Sbjct: 1831 WAGGAVNFGKLQPGASDNGIDFTTSGLSLGADKQVSQALTLGVGAGYGHDVSDVGQHGSRSAVDSYNVAVYGSYQPGESIYVDALAGYQWLQFDARRFVTDNGNTVHGSRDGKQWFASLSV----GYQHQAKDMMLTPYGRLDVARAALDGYTETGDAVFALRYEGQTVKTSTANLGLLAQWSVKRDYGMWTPQLRAEFGHDMQG 2031
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A1D9BCY9_9NEIS (Autotransporter domain-containing protein n=2 Tax=Jeongeupia sp. USM3 TaxID=1906741 RepID=A0A1D9BCY9_9NEIS) HSP 1 Score: 57.8 bits (138), Expect = 2.760e-6 Identity = 47/172 (27.33%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 112 GLTGGLA-----IGYAKGKDKFRGGIGETEVETTSVQAFVSAGQTIVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGF-GGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGD 609 G+ GG+A IG K + R G+ ++ V +++ G+ GYGW N D R +T G A+ S++ L +AA + G ++PY ++D+ AT+DAY+E+ AG++ L ++T + + G + G +T R+R ++++ +GG D Sbjct: 4 GVGGGVARDVSDIGDNGSKSEGRSGV-------VAIYGSVRPAESLFVDGMLGYGWLNFDVDRYITGNGRFASGSRDGN--QLFGLLAAGYEYRNGTWLVSPYGRVDLMSATLDAYTESAAGLSALSYGEQTVRMTTGKLGLRGETSFDVSVGRLTPRMRIEYQHQFEGGDD 166
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: UPI001BAB8A27 (Ig-like domain repeat protein n=1 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001BAB8A27) HSP 1 Score: 59.3 bits (142), Expect = 2.790e-6 Identity = 50/176 (28.41%), Postives = 74/176 (42.05%), Query Frame = 1 Query: 88 GIDLASTEGLTGGLAIGYAKGKDKFRGGIGETEVETTSVQAFVSAGQTIV----FSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGFGGDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGG 603 G D +G G A+G G D + G + ++ S A + A + GYGW D +R +S G + Q A G + D L+ Y ++D+ RA +D YSETG+ L K + A G L P+ + G +T +RA WR+ DGG Sbjct: 1164 GFDRRLADGFKAGAALGL--GFDNTKIGTDGSRIDARSFDATIYASWRFLPHTYLDMAGGYGWLRFDNKR-WSSDGNVMLTGQRAGSQLFGTLGLTHVSKWDDFKLSSYGRLDVVRAALDGYSETGSSAWALTYDKMNTTSVASVLGGRLAYPILQSWGVLTPAVRAEWRHAFDGG 1336
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Match: A0A1G5ZEB5_9HYPH (Outer membrane autotransporter barrel domain-containing protein n=4 Tax=Mesorhizobium TaxID=68287 RepID=A0A1G5ZEB5_9HYPH) HSP 1 Score: 59.3 bits (142), Expect = 2.840e-6 Identity = 66/254 (25.98%), Postives = 110/254 (43.31%), Query Frame = 1 Query: 25 GKRDTEVGQAGSKTSRPMFMAGIDLASTEGLTGGLAIGYAKGKDKF--RGGIGETEVETTSVQAFVSAGQTIVFSGVAGYGWSNLDTRRSLTSLGLTATSSQEAKVWSLGAKVAAPMGFG-GDSTLAPYAQIDMQRATIDAYSETGAGVAGLVVPKRTEETSALEAGAALTIPLATAGGGMTARLRAGWRYRLDGGGDEFATR----LAGSPVAFLTSVQSPSRSAVHIGAALSGELAPNVTASASYRGLLSGD 765 G+RD G G K AG+D + GL +GY + G + T + A GQ G+ GY W + D++R LTS G A ++ W A V+A F + ++PYA++D+ +A +DA++E+G + L ++ T+ G L A G ++ ++R Y+ D GD T + G P+ + TS+ + +G ++ + A + YRGL D Sbjct: 1339 GQRD---GNDGYKFETTGLSAGVDYRCSRAFAIGLGMGYGRDVSDVGDNGSRSTGKAYTAGLYASYHPGQDYFIDGLMGYQWLSFDSKRYLTSGGGFANGERDGGQWF--ASVSAGKKFEIQEWQISPYARLDVAKAKLDAFTESGDPSSALHYGEQDISTTTGNLGLTLAYKFAADFGVVSPQVRL--EYQHDFQGDSAITMNYADMFGGPI-YHTSIDGLGKDRFMLGLGVNVQTAQDFNMRLEYRGLFGSD 1584 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12643.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12643.1.1 >prot_P-wetherbeei_contig12643.1.1 ID=prot_P-wetherbeei_contig12643.1.1|Name=mRNA_P-wetherbeei_contig12643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp FAAAGTSFGKRDTEVGQAGSKTSRPMFMAGIDLASTEGLTGGLAIGYAKGback to top mRNA from alignment at P-wetherbeei_contig12643:328..1137- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12643.1.1 ID=mRNA_P-wetherbeei_contig12643.1.1|Name=mRNA_P-wetherbeei_contig12643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig12643:328..1137- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12643:328..1137- >mRNA_P-wetherbeei_contig12643.1.1 ID=mRNA_P-wetherbeei_contig12643.1.1|Name=mRNA_P-wetherbeei_contig12643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig12643:328..1137- (Phaeothamnion wetherbeei SAG_119_79)back to top |